Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001155973 20 390 NP_055903 20 390 NP_065107 17 3301 NP_001140168 17 3301 NP_001140167 17 3301 NP_055876 17 3301 NP_001140166 17 3301 XP_006719055 17 3301 XP_005253773 17 3301 XP_006716804 17 3301 NP_001193976 17 4312 NP_647537 17 4312 NP_647538 17 4312 NP_060899 17 4312 XP_006725524 17 4312 XP_006725523 17 4312 XP_005276828 17 4312 XP_006726279 17 4312 XP_005260918 17 4312 XP_005260917 17 4312 XP_006714722 17 4312 XP_006714721 17 4312 NP_001153682 16 5631 NP_055066 16 5631 NP_001263347 16 5631 NP_055681 16 5631 NP_690597 16 5631 NP_004897 16 5631 NP_690596 16 5631 NP_001257461 16 5631 NP_001257460 16 5631 NP_001257462 16 5631 XP_005266194 16 5631 XP_005266193 16 5631 XP_005266191 16 5631 XP_005266190 16 5631 XP_005266189 16 5631 XP_006715896 16 5631 XP_006715894 16 5631 XP_006715893 16 5631 NP_787071 16 7355 NP_071899 15 9605 NP_001177779 15 9605 NP_001177776 15 9605 NP_037448 15 9605 NP_001008226 15 9605 NP_001177778 15 9605 NP_001177777 15 9605 NP_689594 15 9605 NP_001035502 15 9605 NP_001035501 15 9605 NP_004679 15 9605 NP_065880 15 9605 NP_037375 15 9605 NP_001129392 15 9605 NP_976044 15 9605 NP_001274320 15 9605 NP_001035500 15 9605 NP_001193486 15 9605 XP_005251580 15 9605 XP_005246998 15 9605 XP_006712319 15 9605 XP_005271295 15 9605 XP_005275822 15 9605 NP_001186073 15 9605 NP_112227 15 9605 NP_078799 15 9605>NP_001155973 Length = 1833 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GGEVDQTKN 9 G EVDQTKN Sbjct: 750 GEEVDQTKN 758>NP_055903 Length = 1723 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GGEVDQTKN 9 G EVDQTKN Sbjct: 750 GEEVDQTKN 758>NP_065107 Length = 552 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GGEVDQTKN 9 GG D+TKN Sbjct: 394 GGNDDKTKN 402>NP_001140168 Length = 835 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GGEVDQTKN 9 GG + QTKN Sbjct: 784 GGALKQTKN 792>NP_001140167 Length = 813 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GGEVDQTKN 9 GG + QTKN Sbjct: 762 GGALKQTKN 770>NP_055876 Length = 1056 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GGEVDQTKN 9 GG + QTKN Sbjct: 762 GGALKQTKN 770>NP_001140166 Length = 1047 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GGEVDQTKN 9 GG + QTKN Sbjct: 762 GGALKQTKN 770>XP_006719055 Length = 419 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GGEVDQTKN 9 GG D+TKN Sbjct: 394 GGNDDKTKN 402>XP_005253773 Length = 509 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GGEVDQTKN 9 GG D+TKN Sbjct: 351 GGNDDKTKN 359>XP_006716804 Length = 1089 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GGEVDQTKN 9 GG + QTKN Sbjct: 762 GGALKQTKN 770>NP_001193976 Length = 1156 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GGEVDQTKN 9 GG++D T N Sbjct: 292 GGKIDSTGN 300>NP_647537 Length = 1429 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GGEVDQTKN 9 GG++D T N Sbjct: 408 GGKIDSTGN 416>NP_647538 Length = 1272 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GGEVDQTKN 9 GG++D T N Sbjct: 408 GGKIDSTGN 416>NP_060899 Length = 2624 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EVDQTKN 9 E+DQT+N Sbjct: 601 EIDQTEN 607>XP_006725524 Length = 2584 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EVDQTKN 9 E+DQT+N Sbjct: 601 EIDQTEN 607>XP_006725523 Length = 2623 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EVDQTKN 9 E+DQT+N Sbjct: 601 EIDQTEN 607>XP_005276828 Length = 2584 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EVDQTKN 9 E+DQT+N Sbjct: 601 EIDQTEN 607>XP_006726279 Length = 2623 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EVDQTKN 9 E+DQT+N Sbjct: 601 EIDQTEN 607>XP_005260918 Length = 1111 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GGEVDQTKN 9 GG++D T N Sbjct: 408 GGKIDSTGN 416>XP_005260917 Length = 1289 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GGEVDQTKN 9 GG++D T N Sbjct: 408 GGKIDSTGN 416>XP_006714722 Length = 2584 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EVDQTKN 9 E+DQT+N Sbjct: 601 EIDQTEN 607>XP_006714721 Length = 2623 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EVDQTKN 9 E+DQT+N Sbjct: 601 EIDQTEN 607>NP_001153682 Length = 676 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GEVDQTKN 9 G VDQTK+ Sbjct: 63 GVVDQTKD 70>NP_055066 Length = 675 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GEVDQTKN 9 G VDQTK+ Sbjct: 63 GVVDQTKD 70>NP_001263347 Length = 2334 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GGEVDQT 7 GGE D+T Sbjct: 572 GGETDET 578>NP_055681 Length = 2357 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GGEVDQT 7 GGE D+T Sbjct: 572 GGETDET 578>NP_690597 Length = 151 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GEVDQTKN 9 GE++QTK+ Sbjct: 126 GELEQTKD 133>NP_004897 Length = 396 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GEVDQTKN 9 GE++QTK+ Sbjct: 126 GELEQTKD 133>NP_690596 Length = 151 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GEVDQTKN 9 GE++QTK+ Sbjct: 126 GELEQTKD 133>NP_001257461 Length = 170 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GEVDQTKN 9 GE++QTK+ Sbjct: 126 GELEQTKD 133>NP_001257460 Length = 396 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GEVDQTKN 9 GE++QTK+ Sbjct: 126 GELEQTKD 133>NP_001257462 Length = 170 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GEVDQTKN 9 GE++QTK+ Sbjct: 126 GELEQTKD 133>XP_005266194 Length = 2379 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GGEVDQT 7 GGE D+T Sbjct: 572 GGETDET 578>XP_005266193 Length = 2248 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GGEVDQT 7 GGE D+T Sbjct: 720 GGETDET 726>XP_005266191 Length = 2379 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GGEVDQT 7 GGE D+T Sbjct: 572 GGETDET 578>XP_005266190 Length = 2485 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GGEVDQT 7 GGE D+T Sbjct: 720 GGETDET 726>XP_005266189 Length = 2505 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GGEVDQT 7 GGE D+T Sbjct: 720 GGETDET 726>XP_006715896 Length = 457 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GEVDQTKN 9 G VDQTK+ Sbjct: 74 GVVDQTKD 81>XP_006715894 Length = 686 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GEVDQTKN 9 G VDQTK+ Sbjct: 74 GVVDQTKD 81>XP_006715893 Length = 687 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GEVDQTKN 9 G VDQTK+ Sbjct: 74 GVVDQTKD 81>NP_787071 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GGEVDQ 6 GGEVD+ Sbjct: 711 GGEVDE 716>NP_071899 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GEVDQTK 8 GEVD+T+ Sbjct: 356 GEVDRTE 362>NP_001177779 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEVDQTKN 9 G VD+ KN Sbjct: 257 GSVDKNKN 264>NP_001177776 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEVDQTKN 9 G VD+ KN Sbjct: 257 GSVDKNKN 264>NP_037448 Length = 639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEVDQTKN 9 G VD+ KN Sbjct: 257 GSVDKNKN 264>NP_001008226 Length = 572 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEVDQTKN 9 G VD+ KN Sbjct: 257 GSVDKNKN 264>NP_001177778 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEVDQTKN 9 G VD+ KN Sbjct: 257 GSVDKNKN 264>NP_001177777 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEVDQTKN 9 G VD+ KN Sbjct: 257 GSVDKNKN 264>NP_689594 Length = 3549 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GGEVDQTKN 9 GG+V TK+ Sbjct: 869 GGDVQTTKH 877>NP_001035502 Length = 1031 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GEVDQTKN 9 G++ +TKN Sbjct: 541 GDIQKTKN 548>NP_001035501 Length = 1006 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GEVDQTKN 9 G++ +TKN Sbjct: 516 GDIQKTKN 523>NP_004679 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GGEVDQ 6 GGEVD+ Sbjct: 188 GGEVDR 193>NP_065880 Length = 1423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEVDQTKN 9 GE QT+N Sbjct: 435 GEASQTQN 442>NP_037375 Length = 468 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EVDQTKN 9 +VD TKN Sbjct: 107 DVDSTKN 113>NP_001129392 Length = 1165 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEVDQTKN 9 GE QT+N Sbjct: 435 GEASQTQN 442>NP_976044 Length = 1079 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GEVDQTKN 9 G++ +TKN Sbjct: 589 GDIQKTKN 596>NP_001274320 Length = 1006 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GEVDQTKN 9 G++ +TKN Sbjct: 516 GDIQKTKN 523>NP_001035500 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 GEVDQTKN 9 G++ +TKN Sbjct: 554 GDIQKTKN 561>NP_001193486 Length = 1386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEVDQTKN 9 GE QT+N Sbjct: 435 GEASQTQN 442>XP_005251580 Length = 1422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GEVDQTKN 9 GE QT+N Sbjct: 434 GEASQTQN 441>XP_005246998 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GGEVDQ 6 GGEVD+ Sbjct: 188 GGEVDR 193>XP_006712319 Length = 3308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GGEVDQTKN 9 GG+V TK+ Sbjct: 628 GGDVQTTKH 636>XP_005271295 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GGEVDQTK 8 G ++DQT+ Sbjct: 111 GSQIDQTE 118>XP_005275822 Length = 800 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GEVDQT 7 G+VDQT Sbjct: 34 GDVDQT 39>NP_001186073 Length = 3327 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GGEVDQTKN 9 GG+V TK+ Sbjct: 647 GGDVQTTKH 655>NP_112227 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GGEVDQTK 8 G ++DQT+ Sbjct: 111 GSQIDQTE 118>NP_078799 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GGEVDQ 6 GGEVD+ Sbjct: 151 GGEVDK 156Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.294 0.125 0.338 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 692,213 Number of extensions: 1686 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |