Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245200 20 299 NP_000240 20 299 XP_005265218 20 299 NP_000526 19 665 NP_055196 19 665 NP_001035197 19 665 XP_005267591 19 665 XP_005267590 19 665 XP_005267589 19 665 XP_005267588 19 665 XP_006720179 19 665 XP_006715806 19 665 XP_006715805 19 665 NP_000525 19 869 NP_001121615 19 869 NP_001121616 19 869 XP_005246706 19 869 XP_005246704 19 869 NP_848621 17 2528 XP_005259919 17 2528 XP_005259918 17 2528 NP_001185624 17 4312 NP_002395 17 4312 NP_000258 17 4312 NP_001035957 17 4312 NP_031394 17 4312 XP_006721991 17 4312 XP_006721990 17 4312 XP_006721989 17 4312 XP_005258041 17 4312 XP_006721988 17 4312 XP_006721987 17 4312 XP_006721986 17 4312 XP_005258040 17 4312 XP_006721985 17 4312 NP_001025035 16 5631 NP_004324 16 7355 NP_000083 16 7355 NP_004949 16 7355 NP_001013870 16 7355 NP_061926 16 7355 NP_001276932 16 7355 NP_002499 16 7355 NP_001837 16 7355 XP_006717964 16 7355 XP_006717963 16 7355 XP_006717962 16 7355 XP_006717961 16 7355 XP_005269972 16 7355 XP_005269971 16 7355 XP_006717960 16 7355 XP_006717959 16 7355 XP_005269970 16 7355 XP_005269969 16 7355 XP_005269968 16 7355 XP_005250103 16 7355 XP_005250102 16 7355 XP_005247794 16 7355 XP_006713802 16 7355 XP_006713801 16 7355 XP_006712315 16 7355 XP_006712314 16 7355 XP_005246339 16 7355 XP_006712313 16 7355 XP_006712312 16 7355 XP_006712311 16 7355 XP_006712310 16 7355 XP_006712309 16 7355 XP_005246338 16 7355 XP_006711834 16 7355 XP_005263496 16 7355 XP_005263495 16 7355 NP_002784 15 9605 NP_078966 15 9605 NP_068798 15 9605 NP_003927 15 9605 NP_060198 15 9605 XP_006722026 15 9605>NP_001245200 Length = 687 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GFRGDALAS 9 GFRG+ALAS Sbjct: 98 GFRGEALAS 106>NP_000240 Length = 756 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GFRGDALAS 9 GFRG+ALAS Sbjct: 98 GFRGEALAS 106>XP_005265218 Length = 687 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GFRGDALAS 9 GFRG+ALAS Sbjct: 98 GFRGEALAS 106>NP_000526 Length = 862 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 GFRGDALAS 9 GFRG+AL+S Sbjct: 105 GFRGEALSS 113>NP_055196 Length = 1429 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 GFRGDALAS 9 GFRG+ALA+ Sbjct: 91 GFRGEALAN 99>NP_001035197 Length = 1453 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 GFRGDALAS 9 GFRG+ALA+ Sbjct: 91 GFRGEALAN 99>XP_005267591 Length = 1275 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 GFRGDALAS 9 GFRG+ALA+ Sbjct: 91 GFRGEALAN 99>XP_005267590 Length = 1394 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 GFRGDALAS 9 GFRG+ALA+ Sbjct: 91 GFRGEALAN 99>XP_005267589 Length = 1418 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 GFRGDALAS 9 GFRG+ALA+ Sbjct: 91 GFRGEALAN 99>XP_005267588 Length = 1453 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 GFRGDALAS 9 GFRG+ALA+ Sbjct: 91 GFRGEALAN 99>XP_006720179 Length = 1453 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 GFRGDALAS 9 GFRG+ALA+ Sbjct: 91 GFRGEALAN 99>XP_006715806 Length = 810 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 GFRGDALAS 9 GFRG+AL+S Sbjct: 105 GFRGEALSS 113>XP_006715805 Length = 860 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 GFRGDALAS 9 GFRG+AL+S Sbjct: 103 GFRGEALSS 111>NP_000525 Length = 932 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GFRGDALAS 9 GFRG+AL S Sbjct: 91 GFRGEALGS 99>NP_001121615 Length = 893 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GFRGDALAS 9 GFRG+AL S Sbjct: 91 GFRGEALGS 99>NP_001121616 Length = 770 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GFRGDALAS 9 GFRG+AL S Sbjct: 91 GFRGEALGS 99>XP_005246706 Length = 891 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GFRGDALAS 9 GFRG+AL S Sbjct: 91 GFRGEALGS 99>XP_005246704 Length = 932 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GFRGDALAS 9 GFRG+AL S Sbjct: 91 GFRGEALGS 99>NP_848621 Length = 318 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GFRGDAL 7 GFRG+AL Sbjct: 123 GFRGEAL 129>XP_005259919 Length = 318 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GFRGDAL 7 GFRG+AL Sbjct: 123 GFRGEAL 129>XP_005259918 Length = 318 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GFRGDAL 7 GFRG+AL Sbjct: 123 GFRGEAL 129>NP_001185624 Length = 279 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GFRGDAL 7 G RGDAL Sbjct: 48 GIRGDAL 54>NP_002395 Length = 255 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GFRGDAL 7 G RGDAL Sbjct: 24 GIRGDAL 30>NP_000258 Length = 2818 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FRGDALAS 9 FRG++LAS Sbjct: 1275 FRGNSLAS 1282>NP_001035957 Length = 2839 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FRGDALAS 9 FRG++LAS Sbjct: 1275 FRGNSLAS 1282>NP_031394 Length = 834 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FRGDALAS 9 FRG++LAS Sbjct: 370 FRGNSLAS 377>XP_006721991 Length = 1632 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FRGDALAS 9 FRG++LAS Sbjct: 1285 FRGNSLAS 1292>XP_006721990 Length = 2823 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FRGDALAS 9 FRG++LAS Sbjct: 1285 FRGNSLAS 1292>XP_006721989 Length = 2823 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FRGDALAS 9 FRG++LAS Sbjct: 1285 FRGNSLAS 1292>XP_005258041 Length = 2836 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FRGDALAS 9 FRG++LAS Sbjct: 1275 FRGNSLAS 1282>XP_006721988 Length = 2846 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FRGDALAS 9 FRG++LAS Sbjct: 1285 FRGNSLAS 1292>XP_006721987 Length = 2849 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FRGDALAS 9 FRG++LAS Sbjct: 1285 FRGNSLAS 1292>XP_006721986 Length = 2854 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FRGDALAS 9 FRG++LAS Sbjct: 1272 FRGNSLAS 1279>XP_005258040 Length = 2857 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FRGDALAS 9 FRG++LAS Sbjct: 1275 FRGNSLAS 1282>XP_006721985 Length = 2867 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FRGDALAS 9 FRG++LAS Sbjct: 1285 FRGNSLAS 1292>NP_001025035 Length = 1200 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GFRGDALA 8 GF+GD L+ Sbjct: 39 GFQGDGLS 46>NP_004324 Length = 766 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 GFRGD 5 GFRGD Sbjct: 387 GFRGD 391>NP_000083 Length = 1690 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 GFRGD 5 GFRGD Sbjct: 722 GFRGD 726>NP_004949 Length = 2549 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RGDALAS 9 +GDALAS Sbjct: 1241 QGDALAS 1247>NP_001013870 Length = 799 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFRGDAL 7 GF+GD L Sbjct: 703 GFQGDTL 709>NP_061926 Length = 804 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFRGDAL 7 GF+GD L Sbjct: 708 GFQGDTL 714>NP_001276932 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GFRGDA 6 GFRG+A Sbjct: 122 GFRGEA 127>NP_002499 Length = 1247 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 GFRGD 5 GFRGD Sbjct: 700 GFRGD 704>NP_001837 Length = 1712 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 GFRGD 5 GFRGD Sbjct: 1450 GFRGD 1454>XP_006717964 Length = 781 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFRGDAL 7 GF+GD L Sbjct: 685 GFQGDTL 691>XP_006717963 Length = 749 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFRGDAL 7 GF+GD L Sbjct: 734 GFQGDTL 740>XP_006717962 Length = 791 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFRGDAL 7 GF+GD L Sbjct: 695 GFQGDTL 701>XP_006717961 Length = 799 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFRGDAL 7 GF+GD L Sbjct: 703 GFQGDTL 709>XP_005269972 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFRGDAL 7 GF+GD L Sbjct: 707 GFQGDTL 713>XP_005269971 Length = 807 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFRGDAL 7 GF+GD L Sbjct: 711 GFQGDTL 717>XP_006717960 Length = 809 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFRGDAL 7 GF+GD L Sbjct: 713 GFQGDTL 719>XP_006717959 Length = 809 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFRGDAL 7 GF+GD L Sbjct: 713 GFQGDTL 719>XP_005269970 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFRGDAL 7 GF+GD L Sbjct: 718 GFQGDTL 724>XP_005269969 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFRGDAL 7 GF+GD L Sbjct: 724 GFQGDTL 730>XP_005269968 Length = 830 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFRGDAL 7 GF+GD L Sbjct: 734 GFQGDTL 740>XP_005250103 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 GFRGD 5 GFRGD Sbjct: 387 GFRGD 391>XP_005250102 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 GFRGD 5 GFRGD Sbjct: 387 GFRGD 391>XP_005247794 Length = 518 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GFRGDA 6 GFRG+A Sbjct: 147 GFRGEA 152>XP_006713802 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GFRGDA 6 GFRG+A Sbjct: 149 GFRGEA 154>XP_006713801 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GFRGDA 6 GFRG+A Sbjct: 149 GFRGEA 154>XP_006712315 Length = 1420 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 GFRGD 5 GFRGD Sbjct: 722 GFRGD 726>XP_006712314 Length = 1445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 GFRGD 5 GFRGD Sbjct: 722 GFRGD 726>XP_005246339 Length = 1505 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 GFRGD 5 GFRGD Sbjct: 537 GFRGD 541>XP_006712313 Length = 1608 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 GFRGD 5 GFRGD Sbjct: 722 GFRGD 726>XP_006712312 Length = 1611 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 GFRGD 5 GFRGD Sbjct: 722 GFRGD 726>XP_006712311 Length = 1612 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 GFRGD 5 GFRGD Sbjct: 722 GFRGD 726>XP_006712310 Length = 1612 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 GFRGD 5 GFRGD Sbjct: 722 GFRGD 726>XP_006712309 Length = 1627 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 GFRGD 5 GFRGD Sbjct: 722 GFRGD 726>XP_005246338 Length = 1690 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 GFRGD 5 GFRGD Sbjct: 722 GFRGD 726>XP_006711834 Length = 1156 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 GFRGD 5 GFRGD Sbjct: 700 GFRGD 704>XP_005263496 Length = 2322 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RGDALAS 9 +GDALAS Sbjct: 1014 QGDALAS 1020>XP_005263495 Length = 2549 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RGDALAS 9 +GDALAS Sbjct: 1241 QGDALAS 1247>NP_002784 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 GFRGDAL 7 GF GD L Sbjct: 84 GFHGDCL 90>NP_078966 Length = 14507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GDALAS 9 GDALAS Sbjct: 4575 GDALAS 4580>NP_068798 Length = 460 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FRGDALAS 9 F GDAL S Sbjct: 408 FSGDALES 415>NP_003927 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RGDALAS 9 RGD LAS Sbjct: 248 RGDELAS 254>NP_060198 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FRGDAL 7 FRGD+L Sbjct: 329 FRGDSL 334>XP_006722026 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FRGDAL 7 FRGD+L Sbjct: 328 FRGDSL 333Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.141 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 570,628 Number of extensions: 1008 Number of successful extensions: 78 Number of sequences better than 10000.0: 78 Number of HSP's gapped: 78 Number of HSP's successfully gapped: 78 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |