Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005350 19 665 NP_008900 17 4312 XP_006723420 17 4312 XP_006723419 17 4312 XP_006723418 17 4312 XP_006723417 17 4312 NP_005179 16 5631 NP_001263200 16 7355 NP_001263201 16 7355 NP_003916 16 7355 NP_001263199 16 7355 NP_001004301 16 7355 NP_001245380 16 7355 NP_002381 16 7355 NP_872629 16 7355 NP_001276881 16 7355 NP_001276880 16 7355 NP_001008401 16 7355 NP_001245379 16 7355 NP_003438 16 7355 XP_006723584 16 7355 XP_006723583 16 7355 XP_006723582 16 7355 XP_006723533 16 7355 XP_006723531 16 7355 XP_005259458 16 7355 XP_006723069 16 7355 XP_005257430 16 7355 XP_006721039 16 7355 XP_005255732 16 7355 XP_006715242 16 7355 XP_005249428 16 7355 XP_005249429 16 7355 XP_005249430 16 7355 XP_006710114 16 7355 NP_004194 16 7355 NP_612383 16 7355 NP_694573 16 7355 NP_694563 16 7355 NP_004516 15 9605 NP_006489 15 9605 NP_001238831 15 9605 NP_003976 15 9605 NP_115582 15 9605 NP_002763 15 9605 NP_001124430 15 9605 NP_055858 15 9605 NP_001035275 15 9605 NP_001436 15 9605 NP_942568 15 9605 XP_006723530 15 9605 XP_006723529 15 9605 XP_005256255 15 9605 XP_006721361 15 9605 XP_005256254 15 9605 XP_005256253 15 9605 XP_005256252 15 9605 XP_005256251 15 9605 XP_006721360 15 9605 XP_005256250 15 9605 XP_006714893 15 9605 XP_006714892 15 9605 XP_006714891 15 9605 XP_006712591 15 9605 XP_006712590 15 9605 XP_006712589 15 9605 NP_001035532 15 9605>NP_005350 Length = 552 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GETFKVTSS 9 GETFKV SS Sbjct: 336 GETFKVPSS 344>NP_008900 Length = 718 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GETFKVTSS 9 G+TF+ TSS Sbjct: 613 GKTFRQTSS 621>XP_006723420 Length = 606 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GETFKVTSS 9 G+TF+ TSS Sbjct: 501 GKTFRQTSS 509>XP_006723419 Length = 634 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GETFKVTSS 9 G+TF+ TSS Sbjct: 529 GKTFRQTSS 537>XP_006723418 Length = 662 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GETFKVTSS 9 G+TF+ TSS Sbjct: 613 GKTFRQTSS 621>XP_006723417 Length = 704 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GETFKVTSS 9 G+TF+ TSS Sbjct: 599 GKTFRQTSS 607>NP_005179 Length = 906 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GETFKVTSS 9 G+TF++T + Sbjct: 176 GDTFRITKA 184>NP_001263200 Length = 572 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GETFKVTS 8 GET VTS Sbjct: 297 GETLSVTS 304>NP_001263201 Length = 540 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GETFKVTS 8 GET VTS Sbjct: 297 GETLSVTS 304>NP_003916 Length = 580 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GETFKVTS 8 GET VTS Sbjct: 297 GETLSVTS 304>NP_001263199 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GETFKVTS 8 GET VTS Sbjct: 297 GETLSVTS 304>NP_001004301 Length = 617 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G+TF TSS Sbjct: 333 GKTFSQTSS 341>NP_001245380 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GETFKVTS 8 GE FKV S Sbjct: 113 GEVFKVRS 120>NP_002381 Length = 769 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G TF+ TSS Sbjct: 332 GRTFQSTSS 340>NP_872629 Length = 480 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GETFKVTS 8 GE FKV S Sbjct: 122 GEVFKVRS 129>NP_001276881 Length = 746 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G+TF TSS Sbjct: 276 GKTFSQTSS 284Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G+TF TSS Sbjct: 444 GKTFSRTSS 452Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G+TF TSS Sbjct: 612 GKTFSRTSS 620>NP_001276880 Length = 746 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G+TF TSS Sbjct: 276 GKTFSQTSS 284Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G+TF TSS Sbjct: 444 GKTFSRTSS 452Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G+TF TSS Sbjct: 612 GKTFSRTSS 620>NP_001008401 Length = 746 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G+TF TSS Sbjct: 276 GKTFSQTSS 284Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G+TF TSS Sbjct: 444 GKTFSRTSS 452Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G+TF TSS Sbjct: 612 GKTFSRTSS 620>NP_001245379 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GETFKVTS 8 GE FKV S Sbjct: 53 GEVFKVRS 60>NP_003438 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GETFKVTS 8 G+TF+V+S Sbjct: 434 GKTFRVSS 441>XP_006723584 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G+TF TSS Sbjct: 321 GKTFSQTSS 329>XP_006723583 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G+TF TSS Sbjct: 321 GKTFSQTSS 329>XP_006723582 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G+TF TSS Sbjct: 321 GKTFSQTSS 329>XP_006723533 Length = 999 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G+TF TSS Sbjct: 473 GKTFSQTSS 481>XP_006723531 Length = 914 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G+TF TSS Sbjct: 473 GKTFSQTSS 481>XP_005259458 Length = 970 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G+TF TSS Sbjct: 473 GKTFSQTSS 481>XP_006723069 Length = 533 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G+TF TSS Sbjct: 333 GKTFSQTSS 341>XP_005257430 Length = 774 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G TF+ TSS Sbjct: 332 GRTFQSTSS 340>XP_006721039 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GETFKVTS 8 GE FKV S Sbjct: 122 GEVFKVRS 129>XP_005255732 Length = 508 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GETFKVTS 8 GE FKV S Sbjct: 131 GEVFKVRS 138>XP_006715242 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GETFKVTS 8 G+TF+V+S Sbjct: 260 GKTFRVSS 267>XP_005249428 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GETFKVTS 8 G+TF+V+S Sbjct: 434 GKTFRVSS 441>XP_005249429 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GETFKVTS 8 G+TF+V+S Sbjct: 434 GKTFRVSS 441>XP_005249430 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GETFKVTS 8 G+TF+V+S Sbjct: 434 GKTFRVSS 441>XP_006710114 Length = 423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G+TF TSS Sbjct: 103 GKTFSQTSS 111>NP_004194 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GETFKVTS 8 GE FKV S Sbjct: 122 GEVFKVRS 129>NP_612383 Length = 970 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G+TF TSS Sbjct: 473 GKTFSQTSS 481>NP_694573 Length = 296 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GETFKVTS 8 G+TF+V+S Sbjct: 167 GKTFRVSS 174>NP_694563 Length = 502 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GETFKVTS 8 G+TF+V+S Sbjct: 259 GKTFRVSS 266>NP_004516 Length = 4655 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G T KVT+S Sbjct: 1425 GRTCKVTAS 1433>NP_006489 Length = 132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GETFKVTSS 9 G T K+T S Sbjct: 15 GSTLKITGS 23>NP_001238831 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GETFKVTS 8 G TFKV S Sbjct: 427 GRTFKVGS 434>NP_003976 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GETFKVTS 8 G TFKV S Sbjct: 422 GRTFKVGS 429>NP_115582 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETFKVTSS 9 +TF++TSS Sbjct: 1497 KTFRLTSS 1504>NP_002763 Length = 1019 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TFKVTS 8 TFK+TS Sbjct: 61 TFKITS 66>NP_001124430 Length = 177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GETFKVT 7 G+TFK T Sbjct: 126 GKTFKAT 132>NP_055858 Length = 1233 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GETFKV 6 GETFK+ Sbjct: 235 GETFKL 240>NP_001035275 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G+TF TSS Sbjct: 472 GKTFSRTSS 480>NP_001436 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GETFKVT 7 G+TFK T Sbjct: 77 GKTFKAT 83>NP_942568 Length = 1250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GETFKV 6 GETFK+ Sbjct: 235 GETFKL 240>XP_006723530 Length = 470 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G+TF TSS Sbjct: 419 GKTFSRTSS 427>XP_006723529 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G+TF TSS Sbjct: 472 GKTFSRTSS 480>XP_005256255 Length = 1809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETFKVTSS 9 +TF++TSS Sbjct: 1440 KTFRLTSS 1447>XP_006721361 Length = 1836 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETFKVTSS 9 +TF++TSS Sbjct: 1467 KTFRLTSS 1474>XP_005256254 Length = 1837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETFKVTSS 9 +TF++TSS Sbjct: 1468 KTFRLTSS 1475>XP_005256253 Length = 1838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETFKVTSS 9 +TF++TSS Sbjct: 1469 KTFRLTSS 1476>XP_005256252 Length = 1865 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETFKVTSS 9 +TF++TSS Sbjct: 1496 KTFRLTSS 1503>XP_005256251 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETFKVTSS 9 +TF++TSS Sbjct: 1497 KTFRLTSS 1504>XP_006721360 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETFKVTSS 9 +TF++TSS Sbjct: 1497 KTFRLTSS 1504>XP_005256250 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETFKVTSS 9 +TF++TSS Sbjct: 1497 KTFRLTSS 1504>XP_006714893 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GETFKVT 7 G+TFK T Sbjct: 77 GKTFKAT 83>XP_006714892 Length = 149 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GETFKVT 7 G+TFK T Sbjct: 98 GKTFKAT 104>XP_006714891 Length = 177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GETFKVT 7 G+TFK T Sbjct: 126 GKTFKAT 132>XP_006712591 Length = 3308 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G T KVT+S Sbjct: 1430 GRTCKVTAS 1438>XP_006712590 Length = 3897 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G T KVT+S Sbjct: 667 GRTCKVTAS 675>XP_006712589 Length = 4660 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GETFKVTSS 9 G T KVT+S Sbjct: 1430 GRTCKVTAS 1438>NP_001035532 Length = 177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GETFKVT 7 G+TFK T Sbjct: 126 GKTFKAT 132Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.298 0.114 0.285 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 390,545 Number of extensions: 629 Number of successful extensions: 73 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 73 Number of HSP's successfully gapped: 73 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |