Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 17 2528 NP_005913 17 2528 XP_005267046 17 2528 XP_005267045 17 2528 NP_060549 17 4312 XP_005264455 17 4312 NP_113614 16 5631 NP_001172025 16 5631 NP_001172024 16 5631 NP_001288 16 7355 NP_001165375 16 7355 NP_055518 16 7355 NP_003310 16 7355 NP_001273059 16 7355 NP_597676 16 7355 NP_001243779 16 7355 NP_596869 16 7355 NP_001248755 16 7355 NP_003929 16 7355 XP_006722995 16 7355 XP_006721197 16 7355 XP_005276812 16 7355 XP_006713491 16 7355 XP_005276811 16 7355 XP_006713490 16 7355 XP_005276810 16 7355 XP_005276809 16 7355 XP_006713489 16 7355 XP_005276808 16 7355 XP_005246888 16 7355 XP_006712788 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 NP_001254479 16 7355 NP_597681 16 7355 NP_001018098 15 9605 NP_060154 15 9605 NP_060550 15 9605 NP_065872 15 9605>NP_006715 Length = 1558 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GELSLLSIK 9 GE SLLSIK Sbjct: 641 GEPSLLSIK 649>NP_005913 Length = 1608 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GELSLLSIK 9 GE SLLSIK Sbjct: 641 GEPSLLSIK 649>XP_005267046 Length = 1554 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GELSLLSIK 9 GE SLLSIK Sbjct: 641 GEPSLLSIK 649>XP_005267045 Length = 1604 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GELSLLSIK 9 GE SLLSIK Sbjct: 641 GEPSLLSIK 649>NP_060549 Length = 995 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 GELSLLS 7 GELSLLS Sbjct: 344 GELSLLS 350>XP_005264455 Length = 671 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 GELSLLS 7 GELSLLS Sbjct: 344 GELSLLS 350>NP_113614 Length = 150 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GELSLLSIK 9 GE+ L+S+K Sbjct: 65 GEIDLMSLK 73>NP_001172025 Length = 102 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GELSLLSIK 9 GE+ L+S+K Sbjct: 65 GEIDLMSLK 73>NP_001172024 Length = 176 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GELSLLSIK 9 GE+ L+S+K Sbjct: 91 GEIDLMSLK 99>NP_001288 Length = 1251 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GELSLLSI 8 GE+SLL++ Sbjct: 1029 GEISLLAV 1036>NP_001165375 Length = 1506 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LSLLSIK 9 LSLLSIK Sbjct: 738 LSLLSIK 744>NP_055518 Length = 1507 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LSLLSIK 9 LSLLSIK Sbjct: 739 LSLLSIK 745>NP_003310 Length = 26926 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GELSLLSI 8 GEL +LSI Sbjct: 23938 GELEILSI 23945>NP_001273059 Length = 1245 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GELSLLSI 8 GE+SLL++ Sbjct: 1023 GEISLLAV 1030>NP_597676 Length = 27051 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GELSLLSI 8 GEL +LSI Sbjct: 24063 GELEILSI 24070>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GELSLLSI 8 GEL +LSI Sbjct: 31362 GELEILSI 31369>NP_596869 Length = 33423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GELSLLSI 8 GEL +LSI Sbjct: 30435 GELEILSI 30442>NP_001248755 Length = 1215 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GELSLLSIK 9 G+LS+ SIK Sbjct: 1127 GDLSMSSIK 1135>NP_003929 Length = 1153 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GELSLLSIK 9 G+LS+ SIK Sbjct: 1065 GDLSMSSIK 1073>XP_006722995 Length = 1203 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GELSLLSIK 9 G+LS+ SIK Sbjct: 1115 GDLSMSSIK 1123>XP_006721197 Length = 1251 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GELSLLSI 8 GE+SLL++ Sbjct: 1029 GEISLLAV 1036>XP_005276812 Length = 1507 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LSLLSIK 9 LSLLSIK Sbjct: 739 LSLLSIK 745>XP_006713491 Length = 1425 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LSLLSIK 9 LSLLSIK Sbjct: 657 LSLLSIK 663>XP_005276811 Length = 1507 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LSLLSIK 9 LSLLSIK Sbjct: 739 LSLLSIK 745>XP_006713490 Length = 1507 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LSLLSIK 9 LSLLSIK Sbjct: 739 LSLLSIK 745>XP_005276810 Length = 1507 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LSLLSIK 9 LSLLSIK Sbjct: 739 LSLLSIK 745>XP_005276809 Length = 1507 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LSLLSIK 9 LSLLSIK Sbjct: 739 LSLLSIK 745>XP_006713489 Length = 1507 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LSLLSIK 9 LSLLSIK Sbjct: 739 LSLLSIK 745>XP_005276808 Length = 1507 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LSLLSIK 9 LSLLSIK Sbjct: 739 LSLLSIK 745>XP_005246888 Length = 22663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GELSLLSI 8 GEL +LSI Sbjct: 19675 GELEILSI 19682>XP_006712788 Length = 24022 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GELSLLSI 8 GEL +LSI Sbjct: 21034 GELEILSI 21041>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GELSLLSI 8 GEL +LSI Sbjct: 30990 GELEILSI 30997>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GELSLLSI 8 GEL +LSI Sbjct: 32496 GELEILSI 32503>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GELSLLSI 8 GEL +LSI Sbjct: 33003 GELEILSI 33010>NP_597681 Length = 27118 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GELSLLSI 8 GEL +LSI Sbjct: 24130 GELEILSI 24137>NP_001018098 Length = 3628 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GELSLLS 7 GELSLL+ Sbjct: 223 GELSLLT 229>NP_060154 Length = 3710 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GELSLLS 7 GELSLL+ Sbjct: 180 GELSLLT 186>NP_060550 Length = 3585 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GELSLLS 7 GELSLL+ Sbjct: 180 GELSLLT 186>NP_065872 Length = 3753 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GELSLLS 7 GELSLL+ Sbjct: 223 GELSLLT 229Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.136 0.321 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 306,165 Number of extensions: 372 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |