Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005148 20 509 NP_009297 20 509 NP_065849 18 1935 NP_036286 16 5631 NP_001158095 16 5631 NP_036331 16 5631 NP_001257569 16 5631 NP_612207 16 5631 NP_001257615 16 5631 NP_001257570 16 5631 NP_001257568 16 5631 NP_036387 16 5631 NP_001273331 16 7355 NP_000237 16 7355 NP_060527 16 7355 NP_877499 16 7355 NP_060099 16 7355 NP_001034637 16 7355 XP_006720946 16 7355 XP_005255380 16 7355 XP_006720945 16 7355 XP_006720944 16 7355 XP_005255378 16 7355 XP_005255377 16 7355 XP_006720943 16 7355 XP_005270636 16 7355 XP_005270635 16 7355 NP_001138764 15 9605 NP_015561 15 9605 NP_000274 15 9605 NP_001138763 15 9605 NP_001364 15 9605 NP_015559 15 9605 NP_003557 15 9605 XP_006719694 15 9605 XP_005272337 15 9605 XP_005272336 15 9605 XP_006711798 15 9605 NP_057301 15 9605>NP_005148 Length = 1130 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 EAADEVFK 9 EAADEVFK Sbjct: 792 EAADEVFK 799>NP_009297 Length = 1149 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 EAADEVFK 9 EAADEVFK Sbjct: 811 EAADEVFK 818>NP_065849 Length = 1018 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GEAADEVF 8 G AADEVF Sbjct: 114 GPAADEVF 121>NP_036286 Length = 859 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GEAADEVFK 9 GE D +FK Sbjct: 121 GEGKDRIFK 129>NP_001158095 Length = 825 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GEAADEVFK 9 GE D +FK Sbjct: 121 GEGKDRIFK 129>NP_036331 Length = 857 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GEAADEVFK 9 GE D +FK Sbjct: 119 GEGKDRIFK 127>NP_001257569 Length = 188 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EAADEVFK 9 EAADE+ K Sbjct: 41 EAADEICK 48>NP_612207 Length = 188 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EAADEVFK 9 EAADE+ K Sbjct: 41 EAADEICK 48>NP_001257615 Length = 188 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EAADEVFK 9 EAADE+ K Sbjct: 41 EAADEICK 48>NP_001257570 Length = 146 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EAADEVFK 9 EAADE+ K Sbjct: 41 EAADEICK 48>NP_001257568 Length = 188 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EAADEVFK 9 EAADE+ K Sbjct: 41 EAADEICK 48>NP_036387 Length = 950 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GEAADEVFK 9 GE D +FK Sbjct: 397 GEVEDSIFK 405>NP_001273331 Length = 1131 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AADEVF 8 AADEVF Sbjct: 480 AADEVF 485>NP_000237 Length = 1130 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AADEVF 8 AADEVF Sbjct: 479 AADEVF 484>NP_060527 Length = 289 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EAADEVFK 9 +AAD+ FK Sbjct: 28 DAADDAFK 35>NP_877499 Length = 730 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EAADEVFK 9 +AAD+ FK Sbjct: 28 DAADDAFK 35>NP_060099 Length = 861 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GEAADEVFK 9 GE D+ FK Sbjct: 111 GEGKDQTFK 119>NP_001034637 Length = 583 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GEAADEVF 8 GE+ D+VF Sbjct: 543 GESTDKVF 550>XP_006720946 Length = 1081 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AADEVF 8 AADEVF Sbjct: 430 AADEVF 435>XP_005255380 Length = 1082 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AADEVF 8 AADEVF Sbjct: 431 AADEVF 436>XP_006720945 Length = 1096 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AADEVF 8 AADEVF Sbjct: 445 AADEVF 450>XP_006720944 Length = 1097 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AADEVF 8 AADEVF Sbjct: 446 AADEVF 451>XP_005255378 Length = 1145 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AADEVF 8 AADEVF Sbjct: 494 AADEVF 499>XP_005255377 Length = 1146 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AADEVF 8 AADEVF Sbjct: 495 AADEVF 500>XP_006720943 Length = 1208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AADEVF 8 AADEVF Sbjct: 557 AADEVF 562>XP_005270636 Length = 794 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GEAADEVFK 9 GE D+ FK Sbjct: 44 GEGKDQTFK 52>XP_005270635 Length = 794 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GEAADEVFK 9 GE D+ FK Sbjct: 44 GEGKDQTFK 52>NP_001138764 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AADEVFK 9 +ADE+FK Sbjct: 82 SADEMFK 88>NP_015561 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 EAADEV 7 EAADEV Sbjct: 222 EAADEV 227>NP_000274 Length = 854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AADEVFK 9 +ADE+FK Sbjct: 361 SADEMFK 367>NP_001138763 Length = 853 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AADEVFK 9 +ADE+FK Sbjct: 361 SADEMFK 367>NP_001364 Length = 4515 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GEAADEVFK 9 GE +E+F+ Sbjct: 3960 GEVTEEIFE 3968>NP_015559 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 EAADEV 7 EAADEV Sbjct: 154 EAADEV 159>NP_003557 Length = 1411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AADEVFK 9 +ADE+FK Sbjct: 52 SADELFK 58>XP_006719694 Length = 1465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AADEVFK 9 +ADE+FK Sbjct: 106 SADELFK 112>XP_005272337 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AADEVFK 9 +ADE+FK Sbjct: 82 SADEMFK 88>XP_005272336 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AADEVFK 9 +ADE+FK Sbjct: 82 SADEMFK 88>XP_006711798 Length = 4586 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GEAADEVFK 9 GE +E+F+ Sbjct: 4022 GEVTEEIFE 4030>NP_057301 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GEAADEVFK 9 GEAA+E K Sbjct: 216 GEAAEEAKK 224Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.130 0.343 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 478,432 Number of extensions: 921 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |