Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_065681 19 869 NP_066124 19 869 XP_006717999 19 869 NP_003239 18 1935 NP_001258635 17 2528 NP_112205 17 2528 XP_005251390 17 2528 XP_005251389 17 2528 NP_003256 17 4312 NP_653200 17 4312 NP_001135747 17 4312 NP_653181 17 4312 NP_001243534 17 4312 NP_001243533 17 4312 NP_001243538 17 4312 XP_006714357 17 4312 XP_005244921 17 4312 NP_004954 16 5631 NP_001258523 16 5631 NP_001186862 16 5631 NP_055269 16 5631 NP_653266 16 5631 NP_001186863 16 5631 NP_115605 16 5631 NP_055672 15 9605 NP_001273670 15 9605 NP_116296 15 9605 NP_001273668 15 9605 NP_001273671 15 9605 NP_001273669 15 9605 NP_957717 15 9605 NP_036329 15 9605 NP_001122062 15 9605 NP_000491 15 9605 NP_001273283 15 9605 NP_683766 15 9605 NP_001273284 15 9605 NP_002215 15 9605 NP_001136099 15 9605 NP_001128521 15 9605 NP_001128520 15 9605 NP_001128519 15 9605 NP_001013682 15 9605 NP_001136100 15 9605 NP_060614 15 9605 XP_006726140 15 9605 XP_006726139 15 9605 XP_006725960 15 9605 XP_006725959 15 9605 XP_006725536 15 9605 XP_006725535 15 9605 XP_006720096 15 9605 XP_005267389 15 9605 XP_006720095 15 9605 XP_006720094 15 9605 XP_006717095 15 9605 XP_006717094 15 9605 XP_005251923 15 9605 XP_006715156 15 9605 XP_006715155 15 9605 XP_006715154 15 9605 XP_006715065 15 9605 XP_006715064 15 9605 XP_006711756 15 9605 XP_005245738 15 9605 XP_006711755 15 9605 XP_005245737 15 9605 XP_005270918 15 9605 NP_569736 15 9605>NP_065681 Length = 1072 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAVVLLLHF 9 GA VLLLHF Sbjct: 385 GAGVLLLHF 393>NP_066124 Length = 1114 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAVVLLLHF 9 GA VLLLHF Sbjct: 385 GAGVLLLHF 393>XP_006717999 Length = 1207 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAVVLLLHF 9 GA VLLLHF Sbjct: 478 GAGVLLLHF 486>NP_003239 Length = 961 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GAVVLLLH 8 GA VLLLH Sbjct: 6 GAAVLLLH 13>NP_001258635 Length = 233 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAVVLLLHF 9 G+ VLL HF Sbjct: 183 GSAVLLFHF 191>NP_112205 Length = 453 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GAVVLLLH 8 GAVVLL H Sbjct: 254 GAVVLLTH 261>XP_005251390 Length = 168 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAVVLLLHF 9 G+ VLL HF Sbjct: 118 GSAVLLFHF 126>XP_005251389 Length = 239 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAVVLLLHF 9 G+ VLL HF Sbjct: 189 GSAVLLFHF 197>NP_003256 Length = 904 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VVLLLHF 9 +VLL+HF Sbjct: 719 IVLLIHF 725>NP_653200 Length = 329 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GAVVLLLH 8 G+VVL++H Sbjct: 132 GSVVLIIH 139>NP_001135747 Length = 254 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GAVVLLLH 8 G+VVL++H Sbjct: 57 GSVVLIIH 64>NP_653181 Length = 406 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAVVLLLH 8 G +VLLLH Sbjct: 388 GGLVLLLH 395>NP_001243534 Length = 320 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAVVLLLH 8 G +VLLLH Sbjct: 302 GGLVLLLH 309>NP_001243533 Length = 357 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAVVLLLH 8 G +VLLLH Sbjct: 339 GGLVLLLH 346>NP_001243538 Length = 325 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAVVLLLH 8 G +VLLLH Sbjct: 307 GGLVLLLH 314>XP_006714357 Length = 904 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VVLLLHF 9 +VLL+HF Sbjct: 719 IVLLIHF 725>XP_005244921 Length = 229 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAVVLLLH 8 G +VLLLH Sbjct: 211 GGLVLLLH 218>NP_004954 Length = 1073 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 GAVVLLL 7 GAVVLLL Sbjct: 441 GAVVLLL 447>NP_001258523 Length = 353 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVVLLLHF 9 AVVLL H+ Sbjct: 54 AVVLLAHY 61>NP_001186862 Length = 492 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVVLLLHF 9 AVVLL H+ Sbjct: 202 AVVLLTHY 209>NP_055269 Length = 551 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVVLLLHF 9 AVVLL H+ Sbjct: 261 AVVLLTHY 268>NP_653266 Length = 492 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVVLLLHF 9 AVVLL H+ Sbjct: 193 AVVLLAHY 200>NP_001186863 Length = 426 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVVLLLHF 9 AVVLL H+ Sbjct: 136 AVVLLTHY 143>NP_115605 Length = 841 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAVVLLLH 8 G VVL+LH Sbjct: 627 GIVVLVLH 634>NP_055672 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVVLLLH 8 A VLLLH Sbjct: 627 AAVLLLH 633>NP_001273670 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AVVLLLH 8 A+VL+LH Sbjct: 228 AIVLVLH 234>NP_116296 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AVVLLLH 8 A+VL+LH Sbjct: 188 AIVLVLH 194>NP_001273668 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AVVLLLH 8 A+VL+LH Sbjct: 188 AIVLVLH 194>NP_001273671 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AVVLLLH 8 A+VL+LH Sbjct: 228 AIVLVLH 234>NP_001273669 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AVVLLLH 8 A+VL+LH Sbjct: 188 AIVLVLH 194>NP_957717 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AVVLLLH 8 A+VL+LH Sbjct: 188 AIVLVLH 194>NP_036329 Length = 1069 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVVLLLH 8 A VLLLH Sbjct: 655 AAVLLLH 661>NP_001122062 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVVLLLH 8 AVV LLH Sbjct: 274 AVVFLLH 280>NP_000491 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVVLLLH 8 AVV LLH Sbjct: 304 AVVFLLH 310>NP_001273283 Length = 751 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VVLLLHF 9 V+LL HF Sbjct: 460 VILLCHF 466>NP_683766 Length = 926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VVLLLHF 9 V+LL HF Sbjct: 635 VILLCHF 641>NP_001273284 Length = 855 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VVLLLHF 9 V+LL HF Sbjct: 564 VILLCHF 570>NP_002215 Length = 2671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAVVLLLH 8 G+V+ LLH Sbjct: 119 GSVIQLLH 126>NP_001136099 Length = 437 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GAVVLLLH 8 GAV+ L H Sbjct: 211 GAVIALFH 218>NP_001128521 Length = 174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAVVLLLHF 9 GA++ LHF Sbjct: 55 GAMIAPLHF 63>NP_001128520 Length = 163 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAVVLLLHF 9 GA++ LHF Sbjct: 44 GAMIAPLHF 52>NP_001128519 Length = 163 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAVVLLLHF 9 GA++ LHF Sbjct: 44 GAMIAPLHF 52>NP_001013682 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GAVVLLLH 8 G +LLLH Sbjct: 9 GTCILLLH 16>NP_001136100 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GAVVLLLH 8 GAV+ L H Sbjct: 189 GAVIALFH 196>NP_060614 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GAVVLLLH 8 GAV+ L H Sbjct: 211 GAVIALFH 218>XP_006726140 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVVLLLH 8 AVV LLH Sbjct: 106 AVVFLLH 112>XP_006726139 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVVLLLH 8 AVV LLH Sbjct: 263 AVVFLLH 269>XP_006725960 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVVLLLH 8 AVV LLH Sbjct: 106 AVVFLLH 112>XP_006725959 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVVLLLH 8 AVV LLH Sbjct: 263 AVVFLLH 269>XP_006725536 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVVLLLH 8 AVV LLH Sbjct: 106 AVVFLLH 112>XP_006725535 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVVLLLH 8 AVV LLH Sbjct: 263 AVVFLLH 269>XP_006720096 Length = 135 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAVVLLLHF 9 GA++ LHF Sbjct: 87 GAMIAPLHF 95>XP_005267389 Length = 163 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAVVLLLHF 9 GA++ LHF Sbjct: 44 GAMIAPLHF 52>XP_006720095 Length = 174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAVVLLLHF 9 GA++ LHF Sbjct: 55 GAMIAPLHF 63>XP_006720094 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAVVLLLHF 9 GA++ LHF Sbjct: 87 GAMIAPLHF 95>XP_006717095 Length = 900 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVVLLLH 8 A VLLLH Sbjct: 486 AAVLLLH 492>XP_006717094 Length = 1069 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVVLLLH 8 A VLLLH Sbjct: 655 AAVLLLH 661>XP_005251923 Length = 1069 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVVLLLH 8 A VLLLH Sbjct: 655 AAVLLLH 661>XP_006715156 Length = 1341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAVVLLLH 8 G+V+ LLH Sbjct: 119 GSVIQLLH 126>XP_006715155 Length = 1850 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAVVLLLH 8 G+V+ LLH Sbjct: 119 GSVIQLLH 126>XP_006715154 Length = 2700 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAVVLLLH 8 G+V+ LLH Sbjct: 119 GSVIQLLH 126>XP_006715065 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVVLLLH 8 AVV LLH Sbjct: 106 AVVFLLH 112>XP_006715064 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVVLLLH 8 AVV LLH Sbjct: 263 AVVFLLH 269>XP_006711756 Length = 985 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVVLLLH 8 A VLLLH Sbjct: 627 AAVLLLH 633>XP_005245738 Length = 1014 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVVLLLH 8 A VLLLH Sbjct: 590 AAVLLLH 596>XP_006711755 Length = 1051 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVVLLLH 8 A VLLLH Sbjct: 627 AAVLLLH 633>XP_005245737 Length = 1051 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVVLLLH 8 A VLLLH Sbjct: 627 AAVLLLH 633>XP_005270918 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GAVVLLLH 8 G +LLLH Sbjct: 9 GTCILLLH 16>NP_569736 Length = 163 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAVVLLLHF 9 GA++ LHF Sbjct: 44 GAMIAPLHF 52Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.346 0.161 0.488 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 435,041 Number of extensions: 785 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |