Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001274103 16 5631 NP_000343 16 5631 NP_689618 16 5631 NP_036213 16 5631 NP_150229 16 5631 NP_005679 16 5631 XP_006718349 16 5631 XP_006714638 16 5631 XP_006714637 16 5631 XP_005248487 16 5631 XP_005247116 16 5631 XP_005247115 16 5631 XP_005276063 16 5631 NP_005912 16 7355 NP_569079 16 7355 NP_064520 16 7355 NP_004906 16 7355 NP_997511 16 7355 NP_058198 16 7355 NP_997512 16 7355 NP_997510 16 7355 NP_997057 16 7355 NP_003777 16 7355 NP_065166 16 7355 XP_006723895 16 7355 XP_005257820 16 7355 XP_005249289 16 7355 XP_005248577 16 7355 XP_005248576 16 7355 NP_001135977 16 7355 NP_071452 16 7355 NP_000855 16 7355 NP_000483 15 9605 NP_060720 15 9605 NP_443148 15 9605 NP_001166033 15 9605 NP_001012661 15 9605 XP_005258122 15 9605 XP_006722225 15 9605 XP_005258120 15 9605 XP_005258121 15 9605 XP_005258119 15 9605 XP_006721725 15 9605 XP_006721723 15 9605 XP_006716420 15 9605 XP_006716419 15 9605 XP_006715905 15 9605 NP_001138631 15 9605 NP_612358 15 9605 NP_997234 15 9605>NP_001274103 Length = 1582 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G QR+RIS Sbjct: 832 GGQRQRIS 839>NP_000343 Length = 1581 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G QR+RIS Sbjct: 831 GGQRQRIS 838>NP_689618 Length = 988 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAQRKRISA 9 G QR+R+S+ Sbjct: 881 GLQRRRVSS 889>NP_036213 Length = 640 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQRKRIS 8 AQRKR+S Sbjct: 574 AQRKRLS 580>NP_150229 Length = 1359 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G QR+RIS Sbjct: 605 GGQRQRIS 612>NP_005679 Length = 1437 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G QR+RIS Sbjct: 687 GGQRQRIS 694>XP_006718349 Length = 1646 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G QR+RIS Sbjct: 831 GGQRQRIS 838>XP_006714638 Length = 585 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQRKRIS 8 AQRKR+S Sbjct: 519 AQRKRLS 525>XP_006714637 Length = 589 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQRKRIS 8 AQRKR+S Sbjct: 574 AQRKRLS 580>XP_005248487 Length = 947 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAQRKRISA 9 G QR+R+S+ Sbjct: 840 GLQRRRVSS 848>XP_005247116 Length = 1437 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G QR+RIS Sbjct: 687 GGQRQRIS 694>XP_005247115 Length = 1437 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G QR+RIS Sbjct: 687 GGQRQRIS 694>XP_005276063 Length = 225 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GAQRKRISA 9 GA+RKR +A Sbjct: 115 GARRKRAAA 123>NP_005912 Length = 1512 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G +RKR+S Sbjct: 268 GVRRKRVS 275>NP_569079 Length = 640 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GAQRKRIS 8 GA+R+R+S Sbjct: 68 GAKRRRLS 75>NP_064520 Length = 665 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GAQRKRIS 8 GA+R+R+S Sbjct: 68 GAKRRRLS 75>NP_004906 Length = 678 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G QRKR++ Sbjct: 219 GGQRKRLA 226>NP_997511 Length = 644 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G QRKR++ Sbjct: 197 GGQRKRLA 204>NP_058198 Length = 666 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G QRKR++ Sbjct: 219 GGQRKRLA 226>NP_997512 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G QRKR++ Sbjct: 216 GGQRKRLA 223>NP_997510 Length = 668 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G QRKR++ Sbjct: 221 GGQRKRLA 228>NP_997057 Length = 677 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G QRKR++ Sbjct: 230 GGQRKRLA 237>NP_003777 Length = 1527 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G QR+R+S Sbjct: 753 GGQRQRVS 760>NP_065166 Length = 696 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G+QR R+S Sbjct: 240 GSQRSRVS 247>XP_006723895 Length = 696 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G+QR R+S Sbjct: 240 GSQRSRVS 247>XP_005257820 Length = 1463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G QR+R+S Sbjct: 689 GGQRQRVS 696>XP_005249289 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GAQRKRIS 8 GA+R+R+S Sbjct: 68 GAKRRRLS 75>XP_005248577 Length = 1349 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G +RKR+S Sbjct: 105 GVRRKRVS 112>XP_005248576 Length = 1375 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G +RKR+S Sbjct: 131 GVRRKRVS 138>NP_001135977 Length = 646 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G QRKR++ Sbjct: 203 GGQRKRLA 210>NP_071452 Length = 646 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G QRKR++ Sbjct: 203 GGQRKRLA 210>NP_000855 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QRKRISA 9 +RKRISA Sbjct: 287 ERKRISA 293>NP_000483 Length = 1480 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GAQRKRIS 8 G QR RIS Sbjct: 550 GGQRARIS 557>NP_060720 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G +RKR+S Sbjct: 565 GKKRKRVS 572>NP_443148 Length = 679 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AQRKRISA 9 AQR+R+S+ Sbjct: 654 AQRRRLSS 661>NP_001166033 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G +RKR+S Sbjct: 541 GKKRKRVS 548>NP_001012661 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 GAQ +R+S Sbjct: 41 GAQSRRVS 48>XP_005258122 Length = 277 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAQRKRISA 9 GA+R+R+ A Sbjct: 85 GAKRRRLRA 93>XP_006722225 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAQRKRISA 9 GA+R+R+ A Sbjct: 176 GAKRRRLRA 184>XP_005258120 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAQRKRISA 9 GA+R+R+ A Sbjct: 176 GAKRRRLRA 184>XP_005258121 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAQRKRISA 9 GA+R+R+ A Sbjct: 176 GAKRRRLRA 184>XP_005258119 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAQRKRISA 9 GA+R+R+ A Sbjct: 176 GAKRRRLRA 184>XP_006721725 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AQRKRISA 9 AQR+R+S+ Sbjct: 588 AQRRRLSS 595>XP_006721723 Length = 680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AQRKRISA 9 AQR+R+S+ Sbjct: 655 AQRRRLSS 662>XP_006716420 Length = 646 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G +RKR+S Sbjct: 565 GKKRKRVS 572>XP_006716419 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G +RKR+S Sbjct: 565 GKKRKRVS 572>XP_006715905 Length = 1588 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GAQRKRIS 8 G QR RIS Sbjct: 658 GGQRARIS 665>NP_001138631 Length = 637 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAQRKRIS 8 G +RKR+S Sbjct: 544 GKKRKRVS 551>NP_612358 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAQRKRISA 9 GA+R+R+ A Sbjct: 201 GAKRRRLRA 209>NP_997234 Length = 981 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GAQRKRI 7 GAQR+R+ Sbjct: 104 GAQRERL 110Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.124 0.311 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 448,540 Number of extensions: 886 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |