Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001003938 17 3301 NP_005268 16 7355 NP_963885 16 7355 NP_005520 16 7355 NP_001137146 16 7355 NP_056230 16 7355 NP_001243040 16 7355 NP_001243035 16 7355 NP_004249 16 7355 NP_001243038 16 7355 NP_001248377 16 7355 NP_001248376 16 7355 NP_963886 16 7355 NP_112236 16 7355 NP_001003760 16 7355 XP_005249164 16 7355 XP_006714246 16 7355 XP_006711329 16 7355 XP_006710661 16 7355 XP_005245920 16 7355 XP_006710660 16 7355 XP_006710659 16 7355 XP_006710658 16 7355 XP_006710657 16 7355 NP_002118 15 9605 NP_036523 15 9605 NP_001239223 15 9605 NP_001001132 15 9605 NP_003015 15 9605 NP_001035703 15 9605 NP_001171753 15 9605 NP_004740 15 9605 NP_112162 15 9605 NP_954573 15 9605 NP_061896 15 9605 NP_001276947 15 9605 NP_001248763 15 9605 XP_006725972 15 9605 XP_006725763 15 9605 XP_006725104 15 9605 XP_005261083 15 9605 XP_005261088 15 9605 XP_005261084 15 9605 XP_006721262 15 9605 XP_005256050 15 9605 XP_006721261 15 9605 XP_005256049 15 9605 XP_005256048 15 9605 XP_005256046 15 9605 XP_006721259 15 9605 XP_005256045 15 9605 XP_006715143 15 9605 XP_005249045 15 9605 XP_006715111 15 9605 NP_060336 15 9605>NP_001003938 Length = 141 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AQIAMVW 9 AQIA VW Sbjct: 8 AQIAQVW 14>NP_005268 Length = 278 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GAAQIAMV 8 GAA IAMV Sbjct: 222 GAAVIAMV 229>NP_963885 Length = 278 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GAAQIAMV 8 GAA IAMV Sbjct: 222 GAAVIAMV 229>NP_005520 Length = 4391 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAAQIAMVW 9 GAA I++ W Sbjct: 3048 GAAPISLEW 3056>NP_001137146 Length = 127 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GAAQIAMVW 9 GA+Q+ +W Sbjct: 107 GASQLFRIW 115>NP_056230 Length = 127 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GAAQIAMVW 9 GA+Q+ +W Sbjct: 107 GASQLFRIW 115>NP_001243040 Length = 959 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GAAQIAMVW 9 G Q+A++W Sbjct: 643 GNLQLAIIW 651>NP_001243035 Length = 1021 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GAAQIAMVW 9 G Q+A++W Sbjct: 705 GNLQLAIIW 713>NP_004249 Length = 1021 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GAAQIAMVW 9 G Q+A++W Sbjct: 705 GNLQLAIIW 713>NP_001243038 Length = 1021 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GAAQIAMVW 9 G Q+A++W Sbjct: 705 GNLQLAIIW 713>NP_001248377 Length = 271 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GAAQIAMV 8 GAA IAMV Sbjct: 215 GAAVIAMV 222>NP_001248376 Length = 243 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GAAQIAMV 8 GAA IAMV Sbjct: 187 GAAVIAMV 194>NP_963886 Length = 267 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GAAQIAMV 8 GAA IAMV Sbjct: 211 GAAVIAMV 218>NP_112236 Length = 387 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAAQIAMV 8 GAAQ+A V Sbjct: 190 GAAQVAAV 197>NP_001003760 Length = 634 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AAQIAMVW 9 A QIAM W Sbjct: 233 AFQIAMKW 240>XP_005249164 Length = 634 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AAQIAMVW 9 A QIAM W Sbjct: 233 AFQIAMKW 240>XP_006714246 Length = 215 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GAAQIAMV 8 GAA IAMV Sbjct: 159 GAAVIAMV 166>XP_006711329 Length = 127 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GAAQIAMVW 9 GA+Q+ +W Sbjct: 107 GASQLFRIW 115>XP_006710661 Length = 4057 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAAQIAMVW 9 GAA I++ W Sbjct: 3231 GAAPISLEW 3239>XP_005245920 Length = 4392 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAAQIAMVW 9 GAA I++ W Sbjct: 3049 GAAPISLEW 3057>XP_006710660 Length = 4397 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAAQIAMVW 9 GAA I++ W Sbjct: 3048 GAAPISLEW 3056>XP_006710659 Length = 4556 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAAQIAMVW 9 GAA I++ W Sbjct: 3207 GAAPISLEW 3215>XP_006710658 Length = 4563 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAAQIAMVW 9 GAA I++ W Sbjct: 3214 GAAPISLEW 3222>XP_006710657 Length = 4579 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAAQIAMVW 9 GAA I++ W Sbjct: 3230 GAAPISLEW 3238>NP_002118 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAAQIAMVW 9 GAA A++W Sbjct: 324 GAAVAAVLW 332>NP_036523 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 AAQIAMVW 9 +AQ+A +W Sbjct: 284 SAQVARLW 291>NP_001239223 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 AAQIAMVW 9 +AQ+A +W Sbjct: 268 SAQVARLW 275>NP_001001132 Length = 1220 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 AQIAMVW 9 AQ+A +W Sbjct: 257 AQLASIW 263>NP_003015 Length = 1721 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 AQIAMVW 9 AQ+A +W Sbjct: 257 AQLASIW 263>NP_001035703 Length = 107 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GAAQIAMVW 9 G AQI + W Sbjct: 67 GRAQIPVYW 75>NP_001171753 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 GAAQIAMVW 9 G AQ+ + W Sbjct: 223 GRAQVVLSW 231>NP_004740 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AQIAMVW 9 +QIA VW Sbjct: 136 SQIASVW 142>NP_112162 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AQIAMVW 9 +QIA VW Sbjct: 136 SQIASVW 142>NP_954573 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AQIAMVW 9 +QIA VW Sbjct: 136 SQIASVW 142>NP_061896 Length = 692 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 GAAQIAMVW 9 G AQ+ + W Sbjct: 273 GRAQVVLSW 281>NP_001276947 Length = 692 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 GAAQIAMVW 9 G AQ+ + W Sbjct: 273 GRAQVVLSW 281>NP_001248763 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AQIAMVW 9 +QIA VW Sbjct: 147 SQIASVW 153>XP_006725972 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAAQIAMVW 9 GAA A++W Sbjct: 324 GAAVAAVLW 332>XP_006725763 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAAQIAMVW 9 GAA A++W Sbjct: 324 GAAVAAVLW 332>XP_006725104 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAAQIAMVW 9 GAA A++W Sbjct: 324 GAAVAAVLW 332>XP_005261083 Length = 1716 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 AQIAMVW 9 AQ+A +W Sbjct: 257 AQLASIW 263>XP_005261088 Length = 1144 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 AQIAMVW 9 AQ+A +W Sbjct: 257 AQLASIW 263>XP_005261084 Length = 1215 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 AQIAMVW 9 AQ+A +W Sbjct: 257 AQLASIW 263>XP_006721262 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 GAAQIAMVW 9 G AQ+ + W Sbjct: 273 GRAQVVLSW 281>XP_005256050 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 GAAQIAMVW 9 G AQ+ + W Sbjct: 194 GRAQVVLSW 202>XP_006721261 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 GAAQIAMVW 9 G AQ+ + W Sbjct: 194 GRAQVVLSW 202>XP_005256049 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 GAAQIAMVW 9 G AQ+ + W Sbjct: 194 GRAQVVLSW 202>XP_005256048 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 GAAQIAMVW 9 G AQ+ + W Sbjct: 273 GRAQVVLSW 281>XP_005256046 Length = 692 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 GAAQIAMVW 9 G AQ+ + W Sbjct: 273 GRAQVVLSW 281>XP_006721259 Length = 692 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 GAAQIAMVW 9 G AQ+ + W Sbjct: 273 GRAQVVLSW 281>XP_005256045 Length = 692 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 GAAQIAMVW 9 G AQ+ + W Sbjct: 273 GRAQVVLSW 281>XP_006715143 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAAQIAMVW 9 GAA A++W Sbjct: 324 GAAVAAVLW 332>XP_005249045 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 AAQIAMVW 9 +AQ+A +W Sbjct: 284 SAQVARLW 291>XP_006715111 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 AAQIAMVW 9 +AQ+A +W Sbjct: 284 SAQVARLW 291>NP_060336 Length = 260 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GAAQIAMVW 9 G AQI + W Sbjct: 67 GRAQIPVYW 75Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.126 0.453 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 298,947 Number of extensions: 436 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |