Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 18 1482 NP_005913 18 1482 XP_005267046 18 1482 XP_005267045 18 1482 NP_003513 18 1935 NP_003517 18 1935 NP_001019770 18 1935 NP_001154806 18 1935 NP_066407 18 1935 NP_619790 18 1935 NP_542160 18 1935 XP_006726868 18 1935 XP_006723981 18 1935 XP_005249096 18 1935 XP_006711400 18 1935 XP_006711399 18 1935 XP_006711398 18 1935 NP_003511 18 1935 NP_778225 18 1935 NP_003510 18 1935 NP_066406 18 1935 NP_003519 18 1935 NP_066402 18 1935 NP_003512 18 1935 NP_003518 18 1935 NP_003514 18 1935 NP_003516 18 1935 NP_003509 18 1935 NP_003515 18 1935 NP_733759 17 2528 NP_067019 17 3301 NP_597812 17 3301 NP_006243 17 4312 NP_001494 17 4312 NP_001137359 17 4312 NP_004227 17 4312 XP_005249075 17 4312 NP_115502 16 5631 NP_001091954 16 5631 NP_003750 16 5631 NP_001164194 16 5631 NP_001128214 16 5631 NP_001275514 16 5631 NP_001164193 16 5631 NP_001164195 16 5631 NP_741982 16 5631 NP_116246 16 5631 XP_005254200 16 5631 XP_006714462 16 5631 XP_006714461 16 5631 XP_005265761 16 5631 NP_000127 16 7355 NP_002196 16 7355 NP_001230672 16 7355 NP_001230673 16 7355 NP_542164 16 7355 NP_001376 16 7355 XP_006722446 16 7355 XP_006722445 16 7355 XP_006722444 16 7355 XP_006722443 16 7355 XP_006717067 16 7355 XP_006717066 16 7355 XP_006717065 16 7355 XP_006717064 16 7355 XP_006716581 16 7355 XP_006716580 16 7355 XP_005250875 16 7355 NP_000611 15 9605 NP_001191147 15 9605 NP_001191142 15 9605 NP_001191143 15 9605 NP_001276109 15 9605 NP_001276108 15 9605 NP_001276106 15 9605 XP_006722978 15 9605 XP_006719491 15 9605 XP_006719490 15 9605 XP_006719489 15 9605 NP_112186 15 9605 NP_001276107 15 9605>NP_006715 Length = 1558 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 FV KALKQM Sbjct: 529 FVDKALKQM 537>NP_005913 Length = 1608 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 FV KALKQM Sbjct: 529 FVDKALKQM 537>XP_005267046 Length = 1554 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 FV KALKQM Sbjct: 529 FVDKALKQM 537>XP_005267045 Length = 1604 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 FV KALKQM Sbjct: 529 FVDKALKQM 537>NP_003513 Length = 126 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>NP_003517 Length = 126 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>NP_001019770 Length = 126 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>NP_001154806 Length = 134 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>NP_066407 Length = 126 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>NP_619790 Length = 126 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>NP_542160 Length = 126 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>XP_006726868 Length = 126 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>XP_006723981 Length = 126 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>XP_005249096 Length = 150 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 65 YVYKVLKQV 73>XP_006711400 Length = 126 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>XP_006711399 Length = 128 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>XP_006711398 Length = 147 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>NP_003511 Length = 126 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>NP_778225 Length = 126 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>NP_003510 Length = 126 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>NP_066406 Length = 126 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>NP_003519 Length = 126 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>NP_066402 Length = 126 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>NP_003512 Length = 126 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>NP_003518 Length = 126 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>NP_003514 Length = 126 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>NP_003516 Length = 126 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>NP_003509 Length = 126 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>NP_003515 Length = 126 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 +VYK LKQ+ Sbjct: 41 YVYKVLKQV 49>NP_733759 Length = 127 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 ++YK LKQ+ Sbjct: 42 YIYKVLKQV 50>NP_067019 Length = 1137 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 F+Y A+K+M Sbjct: 648 FIYDAIKKM 656>NP_597812 Length = 1121 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVYKALKQM 9 F+Y A+K+M Sbjct: 648 FIYDAIKKM 656>NP_006243 Length = 552 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VYKALKQM 9 VY+A+KQ+ Sbjct: 419 VYRAMKQL 426>NP_001494 Length = 840 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FVYKALKQ 8 F+YKAL++ Sbjct: 341 FIYKALER 348>NP_001137359 Length = 450 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YKALKQM 9 +KALKQM Sbjct: 69 FKALKQM 75>NP_004227 Length = 443 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YKALKQM 9 +KALKQM Sbjct: 69 FKALKQM 75>XP_005249075 Length = 677 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FVYKALKQ 8 F+YKAL++ Sbjct: 178 FIYKALER 185>NP_115502 Length = 233 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FVYKALKQ 8 F YKA+KQ Sbjct: 32 FDYKAVKQ 39>NP_001091954 Length = 1079 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FVYKALKQM 9 F+Y A K+M Sbjct: 596 FIYDAFKKM 604>NP_003750 Length = 1035 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FVYKALKQM 9 F+Y A K+M Sbjct: 552 FIYDAFKKM 560>NP_001164194 Length = 212 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FVYKALKQ 8 F YKA+KQ Sbjct: 32 FDYKAVKQ 39>NP_001128214 Length = 1094 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FVYKALKQM 9 F+Y A K+M Sbjct: 596 FIYDAFKKM 604>NP_001275514 Length = 332 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 YKALKQM 9 YKALK M Sbjct: 236 YKALKMM 242>NP_001164193 Length = 215 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FVYKALKQ 8 F YKA+KQ Sbjct: 40 FDYKAVKQ 47>NP_001164195 Length = 207 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FVYKALKQ 8 F YKA+KQ Sbjct: 32 FDYKAVKQ 39>NP_741982 Length = 373 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 YKALKQM 9 YKALK M Sbjct: 236 YKALKMM 242>NP_116246 Length = 547 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 YKALKQM 9 YKALK M Sbjct: 236 YKALKMM 242>XP_005254200 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 YKALKQM 9 YKALK M Sbjct: 236 YKALKMM 242>XP_006714462 Length = 1084 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FVYKALKQM 9 F+Y A K+M Sbjct: 601 FIYDAFKKM 609>XP_006714461 Length = 1099 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FVYKALKQM 9 F+Y A K+M Sbjct: 616 FIYDAFKKM 624>XP_005265761 Length = 1110 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FVYKALKQM 9 F+Y A K+M Sbjct: 627 FIYDAFKKM 635>NP_000127 Length = 558 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VYKALKQM 9 +Y+ALK+M Sbjct: 48 MYEALKEM 55>NP_002196 Length = 1049 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VYKALK 7 VYKALK Sbjct: 960 VYKALK 965>NP_001230672 Length = 558 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VYKALKQM 9 +Y+ALK+M Sbjct: 48 MYEALKEM 55>NP_001230673 Length = 492 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VYKALKQM 9 +Y+ALK+M Sbjct: 48 MYEALKEM 55>NP_542164 Length = 950 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYKALKQ 8 +YKALK+ Sbjct: 231 IYKALKR 237>NP_001376 Length = 519 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FVYKALKQ 8 ++YK +KQ Sbjct: 471 YIYKRIKQ 478>XP_006722446 Length = 889 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYKALKQ 8 +YKALK+ Sbjct: 231 IYKALKR 237>XP_006722445 Length = 905 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYKALKQ 8 +YKALK+ Sbjct: 231 IYKALKR 237>XP_006722444 Length = 914 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYKALKQ 8 +YKALK+ Sbjct: 231 IYKALKR 237>XP_006722443 Length = 925 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYKALKQ 8 +YKALK+ Sbjct: 206 IYKALKR 212>XP_006717067 Length = 342 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VYKALKQM 9 +Y+ALK+M Sbjct: 48 MYEALKEM 55>XP_006717066 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VYKALKQM 9 +Y+ALK+M Sbjct: 48 MYEALKEM 55>XP_006717065 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VYKALKQM 9 +Y+ALK+M Sbjct: 48 MYEALKEM 55>XP_006717064 Length = 503 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VYKALKQM 9 +Y+ALK+M Sbjct: 48 MYEALKEM 55>XP_006716581 Length = 502 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FVYKALKQ 8 ++YK +KQ Sbjct: 454 YIYKRIKQ 461>XP_006716580 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FVYKALKQ 8 ++YK +KQ Sbjct: 507 YIYKRIKQ 514>XP_005250875 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 FVYKALKQ 8 ++YK +KQ Sbjct: 507 YIYKRIKQ 514>NP_000611 Length = 1434 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYKALKQ 8 VY+ALK+ Sbjct: 1340 VYRALKE 1346>NP_001191147 Length = 1468 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYKALKQ 8 VY+ALK+ Sbjct: 1374 VYRALKE 1380>NP_001191142 Length = 1098 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYKALKQ 8 VY+ALK+ Sbjct: 1004 VYRALKE 1010>NP_001191143 Length = 1098 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYKALKQ 8 VY+ALK+ Sbjct: 1004 VYRALKE 1010>NP_001276109 Length = 479 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYKALKQ 8 VYKA++Q Sbjct: 416 VYKAIQQ 422>NP_001276108 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYKALKQ 8 VYKA++Q Sbjct: 575 VYKAIQQ 581>NP_001276106 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYKALKQ 8 VYKA++Q Sbjct: 603 VYKAIQQ 609>XP_006722978 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYKALKQ 8 VYKA++Q Sbjct: 603 VYKAIQQ 609>XP_006719491 Length = 1434 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYKALKQ 8 VY+ALK+ Sbjct: 1340 VYRALKE 1346>XP_006719490 Length = 1468 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYKALKQ 8 VY+ALK+ Sbjct: 1374 VYRALKE 1380>XP_006719489 Length = 1468 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYKALKQ 8 VY+ALK+ Sbjct: 1374 VYRALKE 1380>NP_112186 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYKALKQ 8 VYKA++Q Sbjct: 603 VYKAIQQ 609>NP_001276107 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VYKALKQ 8 VYKA++Q Sbjct: 603 VYKAIQQ 609Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.140 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 423,139 Number of extensions: 845 Number of successful extensions: 81 Number of sequences better than 10000.0: 81 Number of HSP's gapped: 81 Number of HSP's successfully gapped: 81 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |