Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000207 18 1482 XP_005274558 18 1482 NP_001245210 17 2528 NP_000242 17 2528 XP_005264389 17 2528 NP_001138462 16 7355 NP_001007189 15 9605 NP_001229825 15 9605 NP_443104 15 9605 NP_060142 15 9605 NP_001229826 15 9605 NP_055477 15 9605 NP_001129501 15 9605 NP_060132 15 9605 NP_060664 15 9605 NP_001164059 15 9605 NP_001116306 15 9605 NP_001164035 15 9605 NP_001164051 15 9605 NP_057652 15 9605 NP_835368 15 9605 NP_001170781 15 9605 NP_835369 15 9605 NP_004471 15 9605 NP_150286 15 9605 NP_056968 15 9605 NP_001164058 15 9605 XP_005261924 15 9605 XP_006724450 15 9605 XP_006724449 15 9605 XP_005261923 15 9605 XP_006724448 15 9605 XP_006724447 15 9605 XP_005261922 15 9605 XP_005261921 15 9605 XP_005261920 15 9605 XP_005261919 15 9605 XP_005254546 15 9605 XP_005254545 15 9605 XP_005254544 15 9605 XP_005254543 15 9605 XP_006720160 15 9605 XP_006720159 15 9605 XP_005252502 15 9605 XP_006717022 15 9605 XP_006711504 15 9605 NP_001170782 15 9605 NP_004499 15 9605>NP_000207 Length = 680 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 FVKYLLLVR 9 F+KY+LLV+ Sbjct: 122 FLKYILLVK 130>XP_005274558 Length = 420 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 FVKYLLLVR 9 F+KY+LLV+ Sbjct: 122 FLKYILLVK 130>NP_001245210 Length = 868 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FVKYLLLVR 9 FVK LLLVR Sbjct: 22 FVKDLLLVR 30>NP_000242 Length = 934 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FVKYLLLVR 9 FVK LLLVR Sbjct: 88 FVKDLLLVR 96>XP_005264389 Length = 921 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FVKYLLLVR 9 FVK LLLVR Sbjct: 88 FVKDLLLVR 96>NP_001138462 Length = 1742 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FVKYLLLV 8 FVK+LL++ Sbjct: 1144 FVKFLLIL 1151>NP_001007189 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVKYLLLVR 9 F++Y +LVR Sbjct: 278 FIQYPVLVR 286>NP_001229825 Length = 1603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVKYLLLVR 9 F++Y +LVR Sbjct: 278 FIQYPVLVR 286>NP_443104 Length = 163 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VKYLLL 7 VKYLLL Sbjct: 12 VKYLLL 17>NP_060142 Length = 1865 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FVKYLLLV 8 FV+Y+++V Sbjct: 1082 FVQYIIMV 1089>NP_001229826 Length = 1503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVKYLLLVR 9 F++Y +LVR Sbjct: 278 FIQYPVLVR 286>NP_055477 Length = 1572 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVKYLLLVR 9 F++Y +LVR Sbjct: 278 FIQYPVLVR 286>NP_001129501 Length = 1594 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVKYLLLVR 9 F++Y +LVR Sbjct: 278 FIQYPVLVR 286>NP_060132 Length = 2022 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FVKYLLLV 8 FV+Y+++V Sbjct: 1055 FVQYIIMV 1062>NP_060664 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVKYLLL 7 +VKYL+L Sbjct: 297 YVKYLVL 303>NP_001164059 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVKYLLL 7 +VKYL+L Sbjct: 232 YVKYLVL 238>NP_001116306 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVKYLLL 7 +VKYL+L Sbjct: 297 YVKYLVL 303>NP_001164035 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVKYLLL 7 +VKYL+L Sbjct: 160 YVKYLVL 166>NP_001164051 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVKYLLL 7 +VKYL+L Sbjct: 297 YVKYLVL 303>NP_057652 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YLLLVR 9 YLLLVR Sbjct: 287 YLLLVR 292>NP_835368 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FVKYLL 6 FVKYL+ Sbjct: 331 FVKYLI 336>NP_001170781 Length = 2017 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FVKYLLLV 8 FV+Y+++V Sbjct: 1050 FVQYIIMV 1057>NP_835369 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FVKYLL 6 FVKYL+ Sbjct: 331 FVKYLI 336>NP_004471 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FVKYLL 6 FVKYL+ Sbjct: 168 FVKYLI 173>NP_150286 Length = 227 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YLLLVR 9 YLLLVR Sbjct: 151 YLLLVR 156>NP_056968 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FVKYLL 6 FVKYL+ Sbjct: 444 FVKYLI 449>NP_001164058 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVKYLLL 7 +VKYL+L Sbjct: 298 YVKYLVL 304>XP_005261924 Length = 1176 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVKYLLLVR 9 F++Y +LVR Sbjct: 278 FIQYPVLVR 286>XP_006724450 Length = 1187 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVKYLLLVR 9 F++Y +LVR Sbjct: 278 FIQYPVLVR 286>XP_006724449 Length = 1198 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVKYLLLVR 9 F++Y +LVR Sbjct: 278 FIQYPVLVR 286>XP_005261923 Length = 1307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVKYLLLVR 9 F++Y +LVR Sbjct: 278 FIQYPVLVR 286>XP_006724448 Length = 1490 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVKYLLLVR 9 F++Y +LVR Sbjct: 165 FIQYPVLVR 173>XP_006724447 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVKYLLLVR 9 F++Y +LVR Sbjct: 278 FIQYPVLVR 286>XP_005261922 Length = 1525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVKYLLLVR 9 F++Y +LVR Sbjct: 278 FIQYPVLVR 286>XP_005261921 Length = 1581 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVKYLLLVR 9 F++Y +LVR Sbjct: 278 FIQYPVLVR 286>XP_005261920 Length = 1594 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVKYLLLVR 9 F++Y +LVR Sbjct: 278 FIQYPVLVR 286>XP_005261919 Length = 1603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FVKYLLLVR 9 F++Y +LVR Sbjct: 278 FIQYPVLVR 286>XP_005254546 Length = 1443 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FVKYLLLV 8 FV+Y+++V Sbjct: 640 FVQYIIMV 647>XP_005254545 Length = 1864 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FVKYLLLV 8 FV+Y+++V Sbjct: 1082 FVQYIIMV 1089>XP_005254544 Length = 1884 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FVKYLLLV 8 FV+Y+++V Sbjct: 1082 FVQYIIMV 1089>XP_005254543 Length = 1885 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FVKYLLLV 8 FV+Y+++V Sbjct: 1082 FVQYIIMV 1089>XP_006720160 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FVKYLL 6 FVKYL+ Sbjct: 331 FVKYLI 336>XP_006720159 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FVKYLL 6 FVKYL+ Sbjct: 331 FVKYLI 336>XP_005252502 Length = 228 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VKYLLLVR 9 + Y+LLVR Sbjct: 150 IDYILLVR 157>XP_006717022 Length = 1054 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FVKYLLLV 8 FV+Y+++V Sbjct: 87 FVQYIIMV 94>XP_006711504 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FVKYLLL 7 +VKYL+L Sbjct: 331 YVKYLVL 337>NP_001170782 Length = 2017 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 FVKYLLLV 8 FV+Y+++V Sbjct: 1050 FVQYIIMV 1057>NP_004499 Length = 284 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VKYLLLVR 9 + Y+LLVR Sbjct: 206 IDYILLVR 213Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.353 0.168 0.475 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 415,842 Number of extensions: 590 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |