Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 509 XP_005271621 20 509 XP_006718907 20 509 XP_006718906 20 509 XP_005271619 20 509 XP_005271618 20 509 NP_073619 17 2528 XP_006719254 17 2528 XP_006719253 17 2528 XP_006719252 17 2528 XP_006719251 17 2528 XP_006719250 17 2528 NP_001278236 17 3301 NP_001243469 17 3301 NP_001243468 17 3301 NP_057475 17 3301 NP_001278235 17 3301 NP_001278237 17 3301 NP_001159509 17 4312 NP_001159508 17 4312 NP_001012774 17 4312 NP_001159510 17 4312 NP_001364 16 5631 NP_001265473 16 5631 NP_000057 16 5631 NP_005840 16 5631 NP_001265472 16 5631 XP_006725466 16 5631 XP_006724384 16 5631 XP_006711798 16 5631 XP_005271223 16 5631 XP_006710936 16 5631 NP_085145 16 5631 NP_000528 16 7355 NP_667338 16 7355 NP_001159608 16 7355 NP_001185625 16 7355 NP_116186 16 7355 NP_004810 16 7355 NP_060101 16 7355 XP_005259343 16 7355 XP_006713923 16 7355 XP_006713922 16 7355 NP_055928 15 9605 NP_056190 15 9605 NP_955749 15 9605 NP_061152 15 9605 NP_891847 15 9605 NP_003819 15 9605 NP_003480 15 9605 XP_006724919 15 9605 XP_006724918 15 9605 XP_005274825 15 9605 XP_005274824 15 9605 XP_005274823 15 9605 XP_006724917 15 9605 XP_005274822 15 9605 XP_006724117 15 9605 XP_005261123 15 9605 XP_005261122 15 9605 XP_005261120 15 9605 XP_005256618 15 9605 XP_005256617 15 9605 XP_006716112 15 9605 XP_005250550 15 9605>NP_000042 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FSVRQNLKE 9 FSV QNLKE Sbjct: 680 FSVHQNLKE 688>XP_005271621 Length = 2708 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FSVRQNLKE 9 FSV QNLKE Sbjct: 332 FSVHQNLKE 340>XP_006718907 Length = 3050 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FSVRQNLKE 9 FSV QNLKE Sbjct: 680 FSVHQNLKE 688>XP_006718906 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FSVRQNLKE 9 FSV QNLKE Sbjct: 680 FSVHQNLKE 688>XP_005271619 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FSVRQNLKE 9 FSV QNLKE Sbjct: 680 FSVHQNLKE 688>XP_005271618 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FSVRQNLKE 9 FSV QNLKE Sbjct: 680 FSVHQNLKE 688>NP_073619 Length = 1183 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VRQNLKE 9 +RQNLKE Sbjct: 595 IRQNLKE 601>XP_006719254 Length = 810 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VRQNLKE 9 +RQNLKE Sbjct: 222 IRQNLKE 228>XP_006719253 Length = 1031 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VRQNLKE 9 +RQNLKE Sbjct: 443 IRQNLKE 449>XP_006719252 Length = 1031 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VRQNLKE 9 +RQNLKE Sbjct: 443 IRQNLKE 449>XP_006719251 Length = 1116 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VRQNLKE 9 +RQNLKE Sbjct: 528 IRQNLKE 534>XP_006719250 Length = 1141 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VRQNLKE 9 +RQNLKE Sbjct: 553 IRQNLKE 559>NP_001278236 Length = 138 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SVRQNLKE 9 SVRQNL E Sbjct: 48 SVRQNLAE 55>NP_001243469 Length = 231 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SVRQNLKE 9 SVRQNL E Sbjct: 48 SVRQNLAE 55>NP_001243468 Length = 232 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SVRQNLKE 9 SVRQNL E Sbjct: 48 SVRQNLAE 55>NP_057475 Length = 178 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SVRQNLKE 9 SVRQNL E Sbjct: 48 SVRQNLAE 55>NP_001278235 Length = 142 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SVRQNLKE 9 SVRQNL E Sbjct: 48 SVRQNLAE 55>NP_001278237 Length = 99 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SVRQNLKE 9 SVRQNL E Sbjct: 48 SVRQNLAE 55>NP_001159509 Length = 412 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FSVRQNLKE 9 FS++QNL E Sbjct: 36 FSLKQNLVE 44>NP_001159508 Length = 412 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FSVRQNLKE 9 FS++QNL E Sbjct: 36 FSLKQNLVE 44>NP_001012774 Length = 412 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FSVRQNLKE 9 FS++QNL E Sbjct: 36 FSLKQNLVE 44>NP_001159510 Length = 412 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FSVRQNLKE 9 FS++QNL E Sbjct: 36 FSLKQNLVE 44>NP_001364 Length = 4515 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FSVRQNLKE 9 F R+NLKE Sbjct: 2844 FENRENLKE 2852>NP_001265473 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVRQNLKE 9 +VRQN+K+ Sbjct: 422 TVRQNMKQ 429>NP_000057 Length = 591 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVRQNLKE 9 +VRQN+K+ Sbjct: 484 TVRQNMKQ 491>NP_005840 Length = 241 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FSVRQNLKE 9 F+VR+ LKE Sbjct: 90 FTVREALKE 98>NP_001265472 Length = 539 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVRQNLKE 9 +VRQN+K+ Sbjct: 432 TVRQNMKQ 439>XP_006725466 Length = 417 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FSVRQNLKE 9 F + QN+KE Sbjct: 95 FELEQNIKE 103>XP_006724384 Length = 417 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FSVRQNLKE 9 F + QN+KE Sbjct: 95 FELEQNIKE 103>XP_006711798 Length = 4586 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FSVRQNLKE 9 F R+NLKE Sbjct: 2906 FENRENLKE 2914>XP_005271223 Length = 628 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVRQNLKE 9 +VRQN+K+ Sbjct: 521 TVRQNMKQ 528>XP_006710936 Length = 630 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVRQNLKE 9 +VRQN+K+ Sbjct: 523 TVRQNMKQ 530>NP_085145 Length = 433 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FSVRQNLKE 9 F + QN+KE Sbjct: 111 FELEQNIKE 119>NP_000528 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVRQNLKE 9 S+R++LKE Sbjct: 41 SIRESLKE 48>NP_667338 Length = 1308 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVRQNLKE 9 SVRQ LK+ Sbjct: 805 SVRQRLKD 812>NP_001159608 Length = 1228 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVRQNLKE 9 SVRQ LK+ Sbjct: 725 SVRQRLKD 732>NP_001185625 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVRQNLKE 9 SVRQ +KE Sbjct: 187 SVRQEVKE 194>NP_116186 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVRQNLKE 9 SVRQ +KE Sbjct: 187 SVRQEVKE 194>NP_004810 Length = 1274 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SVRQNLK 8 SVR+NLK Sbjct: 296 SVRKNLK 302>NP_060101 Length = 1712 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FSVRQNLKE 9 FS+ + LKE Sbjct: 606 FSIEEQLKE 614>XP_005259343 Length = 1274 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SVRQNLK 8 SVR+NLK Sbjct: 296 SVRKNLK 302>XP_006713923 Length = 1228 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVRQNLKE 9 SVRQ LK+ Sbjct: 725 SVRQRLKD 732>XP_006713922 Length = 1262 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVRQNLKE 9 SVRQ LK+ Sbjct: 805 SVRQRLKD 812>NP_055928 Length = 2961 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVRQNL 7 SVRQNL Sbjct: 515 SVRQNL 520>NP_056190 Length = 929 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VRQNLKE 9 +RQNL+E Sbjct: 41 LRQNLRE 47>NP_955749 Length = 884 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VRQNLKE 9 +RQNL+E Sbjct: 41 LRQNLRE 47>NP_061152 Length = 1858 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FSVRQNLKE 9 FSV NL++ Sbjct: 1078 FSVNSNLRD 1086>NP_891847 Length = 1858 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FSVRQNLKE 9 FSV NL++ Sbjct: 1078 FSVNSNLRD 1086>NP_003819 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRQNLKE 9 + QNLKE Sbjct: 614 IHQNLKE 620>NP_003480 Length = 1158 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VRQNLKE 9 +RQ+LKE Sbjct: 153 IRQSLKE 159>XP_006724919 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRQNLKE 9 + QNLKE Sbjct: 520 IHQNLKE 526>XP_006724918 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRQNLKE 9 + QNLKE Sbjct: 614 IHQNLKE 620>XP_005274825 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRQNLKE 9 + QNLKE Sbjct: 622 IHQNLKE 628>XP_005274824 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRQNLKE 9 + QNLKE Sbjct: 631 IHQNLKE 637>XP_005274823 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRQNLKE 9 + QNLKE Sbjct: 631 IHQNLKE 637>XP_006724917 Length = 690 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRQNLKE 9 + QNLKE Sbjct: 639 IHQNLKE 645>XP_005274822 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRQNLKE 9 + QNLKE Sbjct: 648 IHQNLKE 654>XP_006724117 Length = 1158 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VRQNLKE 9 +RQ+LKE Sbjct: 153 IRQSLKE 159>XP_005261123 Length = 1158 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VRQNLKE 9 +RQ+LKE Sbjct: 153 IRQSLKE 159>XP_005261122 Length = 1158 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VRQNLKE 9 +RQ+LKE Sbjct: 153 IRQSLKE 159>XP_005261120 Length = 1158 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VRQNLKE 9 +RQ+LKE Sbjct: 153 IRQSLKE 159>XP_005256618 Length = 2962 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVRQNL 7 SVRQNL Sbjct: 515 SVRQNL 520>XP_005256617 Length = 2966 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVRQNL 7 SVRQNL Sbjct: 515 SVRQNL 520>XP_006716112 Length = 1816 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FSVRQNLKE 9 FSV NL++ Sbjct: 1078 FSVNSNLRD 1086>XP_005250550 Length = 1858 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FSVRQNLKE 9 FSV NL++ Sbjct: 1078 FSVNSNLRD 1086Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.130 0.329 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 431,098 Number of extensions: 908 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |