Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245200 20 509 NP_000240 20 509 XP_005265218 20 509 NP_055196 18 1135 NP_001035197 18 1135 XP_005267591 18 1135 XP_005267590 18 1135 XP_005267589 18 1135 XP_005267588 18 1135 XP_006720179 18 1135 NP_078966 17 3301 NP_000258 17 4312 NP_001035957 17 4312 NP_031394 17 4312 XP_006721991 17 4312 XP_006721990 17 4312 XP_006721989 17 4312 XP_005258041 17 4312 XP_006721988 17 4312 XP_006721987 17 4312 XP_006721986 17 4312 XP_005258040 17 4312 XP_006721985 17 4312 NP_004949 16 7355 NP_001264044 16 7355 NP_065875 16 7355 NP_006169 16 7355 XP_006725689 16 7355 XP_006725339 16 7355 XP_006721992 16 7355 XP_005252604 16 7355 XP_005252603 16 7355 XP_005252601 16 7355 XP_006717551 16 7355 XP_005252600 16 7355 XP_005252599 16 7355 XP_006717550 16 7355 XP_005263496 16 7355 XP_005263495 16 7355 NP_068798 15 9605 NP_003927 15 9605 NP_060198 15 9605 XP_006722026 15 9605>NP_001245200 Length = 687 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FRGDALASI 9 FRG+ALASI Sbjct: 99 FRGEALASI 107>NP_000240 Length = 756 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FRGDALASI 9 FRG+ALASI Sbjct: 99 FRGEALASI 107>XP_005265218 Length = 687 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FRGDALASI 9 FRG+ALASI Sbjct: 99 FRGEALASI 107>NP_055196 Length = 1429 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 FRGDALASI 9 FRG+ALA+I Sbjct: 92 FRGEALANI 100>NP_001035197 Length = 1453 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 FRGDALASI 9 FRG+ALA+I Sbjct: 92 FRGEALANI 100>XP_005267591 Length = 1275 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 FRGDALASI 9 FRG+ALA+I Sbjct: 92 FRGEALANI 100>XP_005267590 Length = 1394 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 FRGDALASI 9 FRG+ALA+I Sbjct: 92 FRGEALANI 100>XP_005267589 Length = 1418 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 FRGDALASI 9 FRG+ALA+I Sbjct: 92 FRGEALANI 100>XP_005267588 Length = 1453 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 FRGDALASI 9 FRG+ALA+I Sbjct: 92 FRGEALANI 100>XP_006720179 Length = 1453 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 FRGDALASI 9 FRG+ALA+I Sbjct: 92 FRGEALANI 100>NP_078966 Length = 14507 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GDALASI 9 GDALASI Sbjct: 4575 GDALASI 4581>NP_000258 Length = 2818 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FRGDALAS 8 FRG++LAS Sbjct: 1275 FRGNSLAS 1282>NP_001035957 Length = 2839 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FRGDALAS 8 FRG++LAS Sbjct: 1275 FRGNSLAS 1282>NP_031394 Length = 834 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FRGDALAS 8 FRG++LAS Sbjct: 370 FRGNSLAS 377>XP_006721991 Length = 1632 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FRGDALAS 8 FRG++LAS Sbjct: 1285 FRGNSLAS 1292>XP_006721990 Length = 2823 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FRGDALAS 8 FRG++LAS Sbjct: 1285 FRGNSLAS 1292>XP_006721989 Length = 2823 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FRGDALAS 8 FRG++LAS Sbjct: 1285 FRGNSLAS 1292>XP_005258041 Length = 2836 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FRGDALAS 8 FRG++LAS Sbjct: 1275 FRGNSLAS 1282>XP_006721988 Length = 2846 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FRGDALAS 8 FRG++LAS Sbjct: 1285 FRGNSLAS 1292>XP_006721987 Length = 2849 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FRGDALAS 8 FRG++LAS Sbjct: 1285 FRGNSLAS 1292>XP_006721986 Length = 2854 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FRGDALAS 8 FRG++LAS Sbjct: 1272 FRGNSLAS 1279>XP_005258040 Length = 2857 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FRGDALAS 8 FRG++LAS Sbjct: 1275 FRGNSLAS 1282>XP_006721985 Length = 2867 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FRGDALAS 8 FRG++LAS Sbjct: 1285 FRGNSLAS 1292>NP_004949 Length = 2549 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RGDALAS 8 +GDALAS Sbjct: 1241 QGDALAS 1247>NP_001264044 Length = 4516 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FRGDALASI 9 F GD LAS+ Sbjct: 2519 FVGDTLASL 2527>NP_065875 Length = 1958 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GDALASI 9 GD+LASI Sbjct: 798 GDSLASI 804>NP_006169 Length = 744 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RGDALASI 9 RGD LAS+ Sbjct: 477 RGDFLASL 484>XP_006725689 Length = 769 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RGDALASI 9 RGD LAS+ Sbjct: 477 RGDFLASL 484>XP_006725339 Length = 769 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RGDALASI 9 RGD LAS+ Sbjct: 477 RGDFLASL 484>XP_006721992 Length = 769 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RGDALASI 9 RGD LAS+ Sbjct: 477 RGDFLASL 484>XP_005252604 Length = 1386 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GDALASI 9 GD+LASI Sbjct: 798 GDSLASI 804>XP_005252603 Length = 1457 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GDALASI 9 GD+LASI Sbjct: 798 GDSLASI 804>XP_005252601 Length = 1948 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GDALASI 9 GD+LASI Sbjct: 788 GDSLASI 794>XP_006717551 Length = 1958 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GDALASI 9 GD+LASI Sbjct: 798 GDSLASI 804>XP_005252600 Length = 1958 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GDALASI 9 GD+LASI Sbjct: 798 GDSLASI 804>XP_005252599 Length = 1958 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GDALASI 9 GD+LASI Sbjct: 798 GDSLASI 804>XP_006717550 Length = 1958 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GDALASI 9 GD+LASI Sbjct: 798 GDSLASI 804>XP_005263496 Length = 2322 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RGDALAS 8 +GDALAS Sbjct: 1014 QGDALAS 1020>XP_005263495 Length = 2549 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RGDALAS 8 +GDALAS Sbjct: 1241 QGDALAS 1247>NP_068798 Length = 460 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FRGDALAS 8 F GDAL S Sbjct: 408 FSGDALES 415>NP_003927 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RGDALAS 8 RGD LAS Sbjct: 248 RGDELAS 254>NP_060198 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRGDAL 6 FRGD+L Sbjct: 329 FRGDSL 334>XP_006722026 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FRGDAL 6 FRGD+L Sbjct: 328 FRGDSL 333Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.144 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 492,274 Number of extensions: 563 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |