Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 21 229 XP_006718908 21 229 XP_005271621 21 229 XP_006718907 21 229 XP_006718906 21 229 XP_005271619 21 229 XP_005271618 21 229 NP_005925 17 2528 XP_005259618 17 2528 NP_002553 17 3301 XP_006726484 17 4312 XP_006715006 17 4312 XP_006710234 17 4312 NP_003176 16 5631 NP_001175 16 7355 NP_002464 16 7355 NP_849172 16 7355 NP_705618 16 7355 NP_004289 16 7355 NP_940928 16 7355 NP_001265241 16 7355 XP_005254964 16 7355 XP_005254963 16 7355 XP_005254962 16 7355 XP_006720562 16 7355 XP_006720561 16 7355 NP_001185617 15 9605 NP_001003680 15 9605 NP_001185616 15 9605 NP_002294 15 9605 NP_001003679 15 9605 NP_001185618 15 9605 NP_078899 15 9605 NP_775767 15 9605 NP_056083 15 9605 XP_005252426 15 9605 XP_005252425 15 9605 XP_005252424 15 9605 XP_005247302 15 9605 NP_839943 15 9605>NP_000042 Length = 3056 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FQEPMMALR 9 FQEP+MALR Sbjct: 2219 FQEPIMALR 2227>XP_006718908 Length = 1708 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FQEPMMALR 9 FQEP+MALR Sbjct: 871 FQEPIMALR 879>XP_005271621 Length = 2708 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FQEPMMALR 9 FQEP+MALR Sbjct: 1871 FQEPIMALR 1879>XP_006718907 Length = 3050 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FQEPMMALR 9 FQEP+MALR Sbjct: 2213 FQEPIMALR 2221>XP_006718906 Length = 3056 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FQEPMMALR 9 FQEP+MALR Sbjct: 2219 FQEPIMALR 2227>XP_005271619 Length = 3056 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FQEPMMALR 9 FQEP+MALR Sbjct: 2219 FQEPIMALR 2227>XP_005271618 Length = 3056 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FQEPMMALR 9 FQEP+MALR Sbjct: 2219 FQEPIMALR 2227>NP_005925 Length = 559 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FQEPMMALR 9 F+EP MAL+ Sbjct: 251 FKEPKMALK 259>XP_005259618 Length = 517 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FQEPMMALR 9 F+EP MAL+ Sbjct: 209 FKEPKMALK 217>NP_002553 Length = 595 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 FQEPMMAL 8 +QEP++AL Sbjct: 529 YQEPLLAL 536>XP_006726484 Length = 213 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 FQEPMMA 7 FQEPM A Sbjct: 160 FQEPMWA 166>XP_006715006 Length = 213 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 FQEPMMA 7 FQEPM A Sbjct: 160 FQEPMWA 166>XP_006710234 Length = 213 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 FQEPMMA 7 FQEPM A Sbjct: 160 FQEPMWA 166>NP_003176 Length = 1085 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QEPMMALR 9 Q PM+ALR Sbjct: 762 QTPMVALR 769>NP_001175 Length = 2644 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QEPMMALR 9 +EP++ALR Sbjct: 1897 KEPILALR 1904>NP_002464 Length = 1960 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FQEPMMALR 9 FQE M A+R Sbjct: 319 FQETMEAMR 327>NP_849172 Length = 1065 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FQEPMMAL 8 FQ+P+M L Sbjct: 649 FQDPVMEL 656>NP_705618 Length = 1391 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FQEPMM 6 FQ+PMM Sbjct: 441 FQKPMM 446>NP_004289 Length = 1332 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FQEPMM 6 FQ+PMM Sbjct: 382 FQKPMM 387>NP_940928 Length = 664 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FQEPMMAL 8 F EP MAL Sbjct: 199 FPEPSMAL 206>NP_001265241 Length = 1327 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 FQEPMM 6 FQ+PMM Sbjct: 441 FQKPMM 446>XP_005254964 Length = 679 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FQEPMMAL 8 F EP MAL Sbjct: 199 FPEPSMAL 206>XP_005254963 Length = 679 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FQEPMMAL 8 F EP MAL Sbjct: 199 FPEPSMAL 206>XP_005254962 Length = 691 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FQEPMMAL 8 F EP MAL Sbjct: 211 FPEPSMAL 218>XP_006720562 Length = 759 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FQEPMMAL 8 F EP MAL Sbjct: 294 FPEPSMAL 301>XP_006720561 Length = 774 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FQEPMMAL 8 F EP MAL Sbjct: 294 FPEPSMAL 301>NP_001185617 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FQEPMMALR 9 FQ P+M+++ Sbjct: 222 FQSPLMSVQ 230>NP_001003680 Length = 958 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FQEPMMALR 9 FQ P+M+++ Sbjct: 222 FQSPLMSVQ 230>NP_001185616 Length = 958 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FQEPMMALR 9 FQ P+M+++ Sbjct: 222 FQSPLMSVQ 230>NP_002294 Length = 1165 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FQEPMMALR 9 FQ P+M+++ Sbjct: 222 FQSPLMSVQ 230>NP_001003679 Length = 896 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FQEPMMALR 9 FQ P+M+++ Sbjct: 222 FQSPLMSVQ 230>NP_001185618 Length = 896 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 FQEPMMALR 9 FQ P+M+++ Sbjct: 222 FQSPLMSVQ 230>NP_078899 Length = 290 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FQEPMMAL 8 F +P+MAL Sbjct: 137 FLQPLMAL 144>NP_775767 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FQEPMMALR 9 FQE +ALR Sbjct: 293 FQERRLALR 301>NP_056083 Length = 2243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FQEPMMAL 8 FQ P MA+ Sbjct: 570 FQHPSMAI 577>XP_005252426 Length = 318 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FQEPMMALR 9 FQE +ALR Sbjct: 293 FQERRLALR 301>XP_005252425 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FQEPMMALR 9 FQE +ALR Sbjct: 293 FQERRLALR 301>XP_005252424 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FQEPMMALR 9 FQE +ALR Sbjct: 293 FQERRLALR 301>XP_005247302 Length = 2248 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FQEPMMAL 8 FQ P MA+ Sbjct: 570 FQHPSMAI 577>NP_839943 Length = 1631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QEPMMALR 9 Q+P +ALR Sbjct: 317 QDPALALR 324Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.139 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 602,107 Number of extensions: 461 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |