Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 869 NP_671714 19 869 XP_006715890 19 869 XP_005250160 19 869 XP_005250159 19 869 NP_065128 18 1482 NP_001135943 18 1482 XP_005263206 18 1482 XP_005263205 18 1482 XP_005267748 18 1935 NP_002341 17 2528 NP_001104567 17 2528 NP_060838 17 2528 XP_005251290 17 2528 XP_006715574 17 2528 NP_001077054 16 5631 NP_004694 16 5631 NP_003904 16 7355 NP_659441 16 7355 NP_008870 16 7355 XP_006725181 16 7355 XP_006725180 16 7355 XP_005268078 16 7355 XP_006716362 16 7355 XP_006716361 16 7355 XP_005267126 16 7355 XP_006715588 16 7355 XP_006715587 16 7355 XP_006715586 16 7355 XP_006715301 16 7355 NP_795713 16 7355 NP_061119 15 9605 NP_001122074 15 9605 NP_005730 15 9605 NP_056161 15 9605 NP_659455 15 9605 NP_001863 15 9605 NP_001265470 15 9605 XP_005254171 15 9605 XP_006720156 15 9605 XP_005266315 15 9605 XP_005266314 15 9605>NP_005742 Length = 3907 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IKSKSKDS 9 IKSKSKDS Sbjct: 809 IKSKSKDS 816>NP_671714 Length = 3899 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IKSKSKDS 9 IKSKSKDS Sbjct: 809 IKSKSKDS 816>XP_006715890 Length = 3860 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IKSKSKDS 9 IKSKSKDS Sbjct: 809 IKSKSKDS 816>XP_005250160 Length = 3939 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IKSKSKDS 9 IKSKSKDS Sbjct: 809 IKSKSKDS 816>XP_005250159 Length = 3952 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IKSKSKDS 9 IKSKSKDS Sbjct: 809 IKSKSKDS 816>NP_065128 Length = 462 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 FIKSKSKDS 9 F+ SKSKDS Sbjct: 19 FLHSKSKDS 27>NP_001135943 Length = 462 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 FIKSKSKDS 9 F+ SKSKDS Sbjct: 19 FLHSKSKDS 27>XP_005263206 Length = 462 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 FIKSKSKDS 9 F+ SKSKDS Sbjct: 19 FLHSKSKDS 27>XP_005263205 Length = 462 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 FIKSKSKDS 9 F+ SKSKDS Sbjct: 19 FLHSKSKDS 27>XP_005267748 Length = 1535 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 FIKSKSKD 8 F+KSK+KD Sbjct: 1489 FLKSKNKD 1496>NP_002341 Length = 512 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IKSKSKDS 9 IKSK KDS Sbjct: 4 IKSKGKDS 11>NP_001104567 Length = 491 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IKSKSKDS 9 IKSK KDS Sbjct: 4 IKSKGKDS 11>NP_060838 Length = 540 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 IKSKSKD 8 IKSKSKD Sbjct: 251 IKSKSKD 257>XP_005251290 Length = 512 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IKSKSKDS 9 IKSK KDS Sbjct: 4 IKSKGKDS 11>XP_006715574 Length = 336 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 IKSKSKD 8 IKSKSKD Sbjct: 47 IKSKSKD 53>NP_001077054 Length = 829 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FIKSKSKDS 9 FIK S+DS Sbjct: 584 FIKQSSEDS 592>NP_004694 Length = 862 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FIKSKSKDS 9 FIK S+DS Sbjct: 584 FIKQSSEDS 592>NP_003904 Length = 1007 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KSKSKD 8 KSKSKD Sbjct: 268 KSKSKD 273Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IKSKSKDS 9 IKS SKD+ Sbjct: 326 IKSPSKDA 333>NP_659441 Length = 787 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSKSKDS 9 KSKS+DS Sbjct: 760 KSKSEDS 766>NP_008870 Length = 1332 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FIKSKSKD 8 F+K K KD Sbjct: 945 FLKKKGKD 952>XP_006725181 Length = 681 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSKSKDS 9 KSKS+DS Sbjct: 654 KSKSEDS 660>XP_006725180 Length = 774 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSKSKDS 9 KSKS+DS Sbjct: 747 KSKSEDS 753>XP_005268078 Length = 1272 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 FIKSKSKD 8 F+K K KD Sbjct: 885 FLKKKGKD 892>XP_006716362 Length = 681 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSKSKDS 9 KSKS+DS Sbjct: 654 KSKSEDS 660>XP_006716361 Length = 774 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSKSKDS 9 KSKS+DS Sbjct: 747 KSKSEDS 753>XP_005267126 Length = 2316 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSKSKDS 9 +SKSKDS Sbjct: 1055 ESKSKDS 1061>XP_006715588 Length = 2330 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSKSKDS 9 +SKSKDS Sbjct: 1069 ESKSKDS 1075>XP_006715587 Length = 2359 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSKSKDS 9 +SKSKDS Sbjct: 1098 ESKSKDS 1104>XP_006715586 Length = 2373 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSKSKDS 9 +SKSKDS Sbjct: 1112 ESKSKDS 1118>XP_006715301 Length = 867 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KSKSKD 8 KSKSKD Sbjct: 268 KSKSKD 273Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IKSKSKDS 9 IKS SKD+ Sbjct: 326 IKSPSKDA 333>NP_795713 Length = 354 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KSKSKD 8 KSKSKD Sbjct: 241 KSKSKD 246>NP_061119 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KSKSKDS 9 KSK KDS Sbjct: 159 KSKPKDS 165>NP_001122074 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FIKSKSKDS 9 F+K ++KDS Sbjct: 689 FVKWENKDS 697>NP_005730 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FIKSKSKDS 9 F+K ++KDS Sbjct: 724 FVKWENKDS 732>NP_056161 Length = 2539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FIKSKSK 7 F+KS+SK Sbjct: 1307 FLKSRSK 1313>NP_659455 Length = 998 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 FIKSKSKDS 9 F KS SKD+ Sbjct: 226 FFKSCSKDT 234>NP_001863 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FIKSKSKD 8 + +SKSKD Sbjct: 322 YTRSKSKD 329>NP_001265470 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FIKSKSKD 8 + +SKSKD Sbjct: 285 YTRSKSKD 292>XP_005254171 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 FIKSKSKDS 9 F+K ++KDS Sbjct: 673 FVKWENKDS 681>XP_006720156 Length = 2497 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FIKSKSK 7 F+KS+SK Sbjct: 1307 FLKSRSK 1313>XP_005266315 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FIKSKSKD 8 + +SKSKD Sbjct: 304 YTRSKSKD 311>XP_005266314 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FIKSKSKD 8 + +SKSKD Sbjct: 341 YTRSKSKD 348Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.117 0.278 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 505,276 Number of extensions: 1247 Number of successful extensions: 44 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |