Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004324 20 390 NP_002871 20 390 XP_005250103 20 390 XP_005250102 20 390 XP_005265416 20 390 XP_005265415 20 390 XP_005265414 20 390 XP_005265412 20 390 NP_001243125 19 869 NP_001645 19 869 XP_006724592 19 869 NP_663623 16 7355 NP_722581 16 7355 NP_002549 16 7355 XP_006721592 16 7355 NP_001706 15 9605 NP_001018075 15 9605 NP_006171 15 9605 NP_001092740 15 9605 NP_000258 15 9605 NP_001035957 15 9605 NP_001376 15 9605 NP_001768 15 9605 NP_001252519 15 9605 NP_958831 15 9605 NP_942088 15 9605 NP_001252518 15 9605 XP_006721990 15 9605 XP_006721989 15 9605 XP_005258041 15 9605 XP_006721988 15 9605 XP_006721987 15 9605 XP_006721986 15 9605 XP_005258040 15 9605 XP_006721985 15 9605 XP_005252063 15 9605 XP_006717183 15 9605 XP_005252061 15 9605 XP_005252060 15 9605 XP_005252058 15 9605 XP_005252046 15 9605 XP_006716581 15 9605 XP_006716580 15 9605 XP_005250875 15 9605 XP_005272447 15 9605 XP_006716314 15 9605 XP_006716313 15 9605 XP_005247966 15 9605 XP_005247965 15 9605>NP_004324 Length = 766 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FGVATVKSR 9 FG+ATVKSR Sbjct: 595 FGLATVKSR 603>NP_002871 Length = 648 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FGVATVKSR 9 FG+ATVKSR Sbjct: 487 FGLATVKSR 495>XP_005250103 Length = 758 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FGVATVKSR 9 FG+ATVKSR Sbjct: 595 FGLATVKSR 603>XP_005250102 Length = 767 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FGVATVKSR 9 FG+ATVKSR Sbjct: 595 FGLATVKSR 603>XP_005265416 Length = 534 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FGVATVKSR 9 FG+ATVKSR Sbjct: 373 FGLATVKSR 381>XP_005265415 Length = 567 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FGVATVKSR 9 FG+ATVKSR Sbjct: 406 FGLATVKSR 414>XP_005265414 Length = 615 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FGVATVKSR 9 FG+ATVKSR Sbjct: 454 FGLATVKSR 462>XP_005265412 Length = 648 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FGVATVKSR 9 FG+ATVKSR Sbjct: 487 FGLATVKSR 495>NP_001243125 Length = 609 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 FGVATVKSR 9 FG+ATVK+R Sbjct: 451 FGLATVKTR 459>NP_001645 Length = 606 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 FGVATVKSR 9 FG+ATVK+R Sbjct: 448 FGLATVKTR 456>XP_006724592 Length = 611 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 FGVATVKSR 9 FG+ATVK+R Sbjct: 453 FGLATVKTR 461>NP_663623 Length = 577 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GVATVKS 8 GVATVK+ Sbjct: 167 GVATVKA 173>NP_722581 Length = 642 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FGVATV 6 FGVATV Sbjct: 597 FGVATV 602>NP_002549 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FGVATV 6 FGVATV Sbjct: 342 FGVATV 347>XP_006721592 Length = 382 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FGVATV 6 FGVATV Sbjct: 325 FGVATV 330>NP_001706 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGVATVKS 8 FGV T+K+ Sbjct: 409 FGVFTIKA 416>NP_001018075 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FGVATVKSR 9 FG VKSR Sbjct: 470 FGFGKVKSR 478>NP_006171 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FGVATVKSR 9 FG VKSR Sbjct: 470 FGFGKVKSR 478>NP_001092740 Length = 500 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GVATVKSR 9 GVA V+SR Sbjct: 453 GVAEVRSR 460>NP_000258 Length = 2818 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGVATVKS 8 FG++ VKS Sbjct: 2144 FGISKVKS 2151>NP_001035957 Length = 2839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGVATVKS 8 FG++ VKS Sbjct: 2165 FGISKVKS 2172>NP_001376 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VATVKSR 9 VAT+KSR Sbjct: 497 VATLKSR 503>NP_001768 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FGVATVKSR 9 FG+ T+K R Sbjct: 160 FGIKTLKYR 168>NP_001252519 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GVATVK 7 GVATVK Sbjct: 352 GVATVK 357>NP_958831 Length = 1013 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GVATVK 7 GVATVK Sbjct: 445 GVATVK 450>NP_942088 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FGVATVKSR 9 FG+ T+K R Sbjct: 160 FGIKTLKYR 168>NP_001252518 Length = 1032 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GVATVK 7 GVATVK Sbjct: 464 GVATVK 469>XP_006721990 Length = 2823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGVATVKS 8 FG++ VKS Sbjct: 2175 FGISKVKS 2182>XP_006721989 Length = 2823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGVATVKS 8 FG++ VKS Sbjct: 2175 FGISKVKS 2182>XP_005258041 Length = 2836 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGVATVKS 8 FG++ VKS Sbjct: 2144 FGISKVKS 2151>XP_006721988 Length = 2846 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGVATVKS 8 FG++ VKS Sbjct: 2154 FGISKVKS 2161>XP_006721987 Length = 2849 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGVATVKS 8 FG++ VKS Sbjct: 2175 FGISKVKS 2182>XP_006721986 Length = 2854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGVATVKS 8 FG++ VKS Sbjct: 2162 FGISKVKS 2169>XP_005258040 Length = 2857 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGVATVKS 8 FG++ VKS Sbjct: 2165 FGISKVKS 2172>XP_006721985 Length = 2867 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGVATVKS 8 FG++ VKS Sbjct: 2175 FGISKVKS 2182>XP_005252063 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FGVATVKSR 9 FG VKSR Sbjct: 470 FGFGKVKSR 478>XP_006717183 Length = 554 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FGVATVKSR 9 FG VKSR Sbjct: 470 FGFGKVKSR 478>XP_005252061 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FGVATVKSR 9 FG VKSR Sbjct: 470 FGFGKVKSR 478>XP_005252060 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FGVATVKSR 9 FG VKSR Sbjct: 470 FGFGKVKSR 478>XP_005252058 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 FGVATVKSR 9 FG VKSR Sbjct: 470 FGFGKVKSR 478>XP_005252046 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GVATVKSR 9 GVA V+SR Sbjct: 467 GVAEVRSR 474>XP_006716581 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VATVKSR 9 VAT+KSR Sbjct: 480 VATLKSR 486>XP_006716580 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VATVKSR 9 VAT+KSR Sbjct: 533 VATLKSR 539>XP_005250875 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VATVKSR 9 VAT+KSR Sbjct: 533 VATLKSR 539>XP_005272447 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGVATVKS 8 FGV T+K+ Sbjct: 338 FGVFTIKA 345>XP_006716314 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGVATVKS 8 FGV T+K+ Sbjct: 409 FGVFTIKA 416>XP_006716313 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGVATVKS 8 FGV T+K+ Sbjct: 409 FGVFTIKA 416>XP_005247966 Length = 293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FGVATVKSR 9 FG+ T+K R Sbjct: 160 FGIKTLKYR 168>XP_005247965 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 FGVATVKSR 9 FG+ T+K R Sbjct: 160 FGIKTLKYR 168Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.132 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 267,124 Number of extensions: 324 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |