Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245200 21 229 NP_000240 21 229 NP_001161089 21 229 XP_005265218 18 1482 NP_899200 17 4312 NP_001186571 17 4312 NP_919424 17 4312 NP_002287 17 4312 XP_006713547 17 4312 XP_006713546 17 4312 XP_005247135 17 4312 XP_005247134 17 4312 XP_005273182 17 4312 XP_006716126 16 5631 XP_005250566 16 5631 XP_005250565 16 5631 NP_001120829 16 5631 NP_001120830 16 5631 NP_065165 16 5631 NP_079236 16 7355 NP_705902 16 7355 NP_705904 16 7355 NP_149122 16 7355 NP_683878 16 7355 NP_783200 16 7355 NP_683879 16 7355 NP_001193884 16 7355 NP_612189 16 7355 NP_006769 16 7355 NP_001269212 16 7355 NP_542179 16 7355 NP_001075042 16 7355 XP_006724868 16 7355 XP_005274706 16 7355 XP_005274705 16 7355 XP_006724867 16 7355 XP_006723694 16 7355 XP_005260892 16 7355 XP_005260893 16 7355 XP_005269959 16 7355 XP_006713068 16 7355 XP_006713067 16 7355 XP_006713066 16 7355 NP_004179 15 9605 NP_001120688 15 9605 NP_005254 15 9605 NP_001120687 15 9605 NP_002664 15 9605 NP_001123554 15 9605 NP_005989 15 9605 NP_065753 15 9605 NP_001364 15 9605 XP_006717361 15 9605 XP_006717360 15 9605 XP_006716871 15 9605 XP_006713269 15 9605 XP_006711798 15 9605 XP_005270806 15 9605>NP_001245200 Length = 687 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FGNAVSREM 9 FGNAVSRE+ Sbjct: 220 FGNAVSREL 228>NP_000240 Length = 756 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FGNAVSREM 9 FGNAVSRE+ Sbjct: 220 FGNAVSREL 228>NP_001161089 Length = 658 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 FGNAVSREM 9 FGNAVSRE+ Sbjct: 122 FGNAVSREL 130>XP_005265218 Length = 687 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 FGNAVSR 7 FGNAVSR Sbjct: 220 FGNAVSR 226>NP_899200 Length = 1261 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GNAVSREM 9 GN VS+EM Sbjct: 686 GNQVSKEM 693>NP_001186571 Length = 911 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GNAVSREM 9 GN VS+EM Sbjct: 336 GNQVSKEM 343>NP_919424 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FGNAVSR 7 FGN++SR Sbjct: 125 FGNSISR 131>NP_002287 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FGNAVSR 7 FGN++SR Sbjct: 125 FGNSISR 131>XP_006713547 Length = 845 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GNAVSREM 9 GN VS+EM Sbjct: 245 GNQVSKEM 252>XP_006713546 Length = 919 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GNAVSREM 9 GN VS+EM Sbjct: 319 GNQVSKEM 326>XP_005247135 Length = 936 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GNAVSREM 9 GN VS+EM Sbjct: 336 GNQVSKEM 343>XP_005247134 Length = 1286 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GNAVSREM 9 GN VS+EM Sbjct: 686 GNQVSKEM 693>XP_005273182 Length = 573 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 FGNAVSR 7 FGN++SR Sbjct: 125 FGNSISR 131>XP_006716126 Length = 708 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FGNAVS 6 FGNAVS Sbjct: 425 FGNAVS 430>XP_005250566 Length = 751 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FGNAVS 6 FGNAVS Sbjct: 468 FGNAVS 473>XP_005250565 Length = 751 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FGNAVS 6 FGNAVS Sbjct: 468 FGNAVS 473>NP_001120829 Length = 751 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FGNAVS 6 FGNAVS Sbjct: 468 FGNAVS 473>NP_001120830 Length = 747 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FGNAVS 6 FGNAVS Sbjct: 464 FGNAVS 469>NP_065165 Length = 747 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 FGNAVS 6 FGNAVS Sbjct: 464 FGNAVS 469>NP_079236 Length = 279 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGNAVSRE 8 FGN +S+E Sbjct: 181 FGNMMSKE 188>NP_705902 Length = 570 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGNAVSRE 8 FGN +S+E Sbjct: 472 FGNMMSKE 479>NP_705904 Length = 279 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGNAVSRE 8 FGN +S+E Sbjct: 181 FGNMMSKE 188>NP_149122 Length = 352 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FGNAVSRE 8 FG VSRE Sbjct: 161 FGGMVSRE 168>NP_683878 Length = 598 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGNAVSRE 8 FGN +S+E Sbjct: 497 FGNMMSKE 504>NP_783200 Length = 1026 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FGNAVSRE 8 FG VSRE Sbjct: 106 FGTIVSRE 113>NP_683879 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGNAVSRE 8 FGN +S+E Sbjct: 272 FGNMMSKE 279>NP_001193884 Length = 1026 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FGNAVSRE 8 FG VSRE Sbjct: 106 FGTIVSRE 113>NP_612189 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGNAVSRE 8 FGN +S+E Sbjct: 213 FGNMMSKE 220>NP_006769 Length = 481 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FGNAVSRE 8 F NAV+RE Sbjct: 444 FTNAVTRE 451>NP_001269212 Length = 548 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FGNAVSRE 8 F N VSRE Sbjct: 495 FANPVSRE 502>NP_542179 Length = 586 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FGNAVSRE 8 F N VSRE Sbjct: 494 FANPVSRE 501>NP_001075042 Length = 587 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FGNAVSRE 8 F N VSRE Sbjct: 495 FANPVSRE 502>XP_006724868 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FGNAVSRE 8 F N VSRE Sbjct: 472 FANPVSRE 479>XP_005274706 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FGNAVSRE 8 F N VSRE Sbjct: 473 FANPVSRE 480>XP_005274705 Length = 587 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FGNAVSRE 8 F N VSRE Sbjct: 495 FANPVSRE 502>XP_006724867 Length = 587 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FGNAVSRE 8 F N VSRE Sbjct: 495 FANPVSRE 502>XP_006723694 Length = 279 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGNAVSRE 8 FGN +S+E Sbjct: 181 FGNMMSKE 188>XP_005260892 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGNAVSRE 8 FGN +S+E Sbjct: 267 FGNMMSKE 274>XP_005260893 Length = 420 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGNAVSRE 8 FGN +S+E Sbjct: 322 FGNMMSKE 329>XP_005269959 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGNAVSRE 8 FGN +S+E Sbjct: 438 FGNMMSKE 445>XP_006713068 Length = 699 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FGNAVSRE 8 FG VSRE Sbjct: 106 FGTIVSRE 113>XP_006713067 Length = 1025 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FGNAVSRE 8 FG VSRE Sbjct: 106 FGTIVSRE 113>XP_006713066 Length = 1032 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 FGNAVSRE 8 FG VSRE Sbjct: 106 FGTIVSRE 113>NP_004179 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FGNAVSRE 8 FG+AVS E Sbjct: 201 FGHAVSLE 208>NP_001120688 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FGNAVSRE 8 FG+AVS E Sbjct: 293 FGHAVSLE 300>NP_005254 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FGNAVSRE 8 FG+AVS E Sbjct: 293 FGHAVSLE 300>NP_001120687 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FGNAVSRE 8 FG+AVS E Sbjct: 293 FGHAVSLE 300>NP_002664 Length = 2135 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GNAVSREM 9 G+AVSR++ Sbjct: 450 GSAVSRDL 457>NP_001123554 Length = 2135 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GNAVSREM 9 G+AVSR++ Sbjct: 450 GSAVSRDL 457>NP_005989 Length = 545 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GNAVSREM 9 GNA+ RE+ Sbjct: 63 GNAILREI 70>NP_065753 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 FGNAVSREM 9 FG V RE+ Sbjct: 402 FGEGVEREL 410>NP_001364 Length = 4515 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGNAVSRE 8 FG A++RE Sbjct: 2181 FGGALNRE 2188>XP_006717361 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FGNAVSRE 8 FG+AVS E Sbjct: 201 FGHAVSLE 208>XP_006717360 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FGNAVSRE 8 FG+AVS E Sbjct: 201 FGHAVSLE 208>XP_006716871 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 FGNAVSREM 9 FG V RE+ Sbjct: 402 FGEGVEREL 410>XP_006713269 Length = 2052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GNAVSREM 9 G+AVSR++ Sbjct: 367 GSAVSRDL 374>XP_006711798 Length = 4586 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FGNAVSRE 8 FG A++RE Sbjct: 2203 FGGALNRE 2210>XP_005270806 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 FGNAVSRE 8 FG+AVS E Sbjct: 293 FGHAVSLE 300Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.130 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 435,870 Number of extensions: 680 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |