Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 20 509 NP_001091680 20 509 NP_001091679 20 509 XP_006713048 20 509 XP_006713047 20 509 XP_006713046 20 509 XP_005264943 20 509 NP_001600 17 2528 NP_008987 17 4312 NP_001265368 17 4312 XP_006716413 17 4312 XP_006716411 17 4312 XP_006716410 17 4312 XP_006716409 17 4312 XP_006716408 17 4312 XP_006716407 17 4312 XP_006716406 17 4312 XP_006716405 17 4312 XP_006716404 17 4312 XP_006716403 17 4312 XP_006716402 17 4312 XP_006716401 17 4312 XP_006716400 17 4312 XP_006716399 17 4312 NP_005261 16 7355 NP_005973 16 7355 NP_000176 16 7355 NP_058628 16 7355 XP_005261654 16 7355 XP_005264157 16 7355 NP_996895 15 9605 NP_036227 15 9605 NP_258260 15 9605 XP_006717827 15 9605 XP_006717826 15 9605 XP_006714867 15 9605 XP_006714866 15 9605 XP_005268581 15 9605 XP_006712486 15 9605 XP_006712485 15 9605>NP_001895 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FAQEQVADI 9 F QEQVADI Sbjct: 74 FTQEQVADI 82>NP_001091680 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FAQEQVADI 9 F QEQVADI Sbjct: 74 FTQEQVADI 82>NP_001091679 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FAQEQVADI 9 F QEQVADI Sbjct: 74 FTQEQVADI 82>XP_006713048 Length = 720 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FAQEQVADI 9 F QEQVADI Sbjct: 74 FTQEQVADI 82>XP_006713047 Length = 774 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FAQEQVADI 9 F QEQVADI Sbjct: 67 FTQEQVADI 75>XP_006713046 Length = 774 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FAQEQVADI 9 F QEQVADI Sbjct: 67 FTQEQVADI 75>XP_005264943 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 FAQEQVADI 9 F QEQVADI Sbjct: 74 FTQEQVADI 82>NP_001600 Length = 432 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 FAQEQVADI 9 FAQEQ+A + Sbjct: 71 FAQEQIAPL 79>NP_008987 Length = 674 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QEQVADI 9 QEQVAD+ Sbjct: 215 QEQVADL 221>NP_001265368 Length = 612 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QEQVADI 9 QEQVAD+ Sbjct: 153 QEQVADL 159>XP_006716413 Length = 1598 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AQEQVADI 9 +QEQV+DI Sbjct: 322 SQEQVSDI 329>XP_006716411 Length = 2064 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AQEQVADI 9 +QEQV+DI Sbjct: 322 SQEQVSDI 329>XP_006716410 Length = 2072 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AQEQVADI 9 +QEQV+DI Sbjct: 322 SQEQVSDI 329>XP_006716409 Length = 2076 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AQEQVADI 9 +QEQV+DI Sbjct: 322 SQEQVSDI 329>XP_006716408 Length = 2117 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AQEQVADI 9 +QEQV+DI Sbjct: 289 SQEQVSDI 296>XP_006716407 Length = 2126 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AQEQVADI 9 +QEQV+DI Sbjct: 322 SQEQVSDI 329>XP_006716406 Length = 2131 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AQEQVADI 9 +QEQV+DI Sbjct: 322 SQEQVSDI 329>XP_006716405 Length = 2138 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AQEQVADI 9 +QEQV+DI Sbjct: 322 SQEQVSDI 329>XP_006716404 Length = 2142 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AQEQVADI 9 +QEQV+DI Sbjct: 322 SQEQVSDI 329>XP_006716403 Length = 2146 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AQEQVADI 9 +QEQV+DI Sbjct: 322 SQEQVSDI 329>XP_006716402 Length = 2149 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AQEQVADI 9 +QEQV+DI Sbjct: 322 SQEQVSDI 329>XP_006716401 Length = 2150 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AQEQVADI 9 +QEQV+DI Sbjct: 322 SQEQVSDI 329>XP_006716400 Length = 2150 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AQEQVADI 9 +QEQV+DI Sbjct: 322 SQEQVSDI 329>XP_006716399 Length = 2150 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AQEQVADI 9 +QEQV+DI Sbjct: 322 SQEQVSDI 329>NP_005261 Length = 1586 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AQEQVADI 9 +QEQ+AD+ Sbjct: 410 SQEQLADL 417>NP_005973 Length = 284 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 FAQEQVA 7 F QEQVA Sbjct: 9 FTQEQVA 15>NP_000176 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FAQEQVAD 8 FA+ Q+AD Sbjct: 245 FAEAQIAD 252>NP_058628 Length = 291 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 FAQEQVA 7 F QEQVA Sbjct: 9 FTQEQVA 15>XP_005261654 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 FAQEQVAD 8 FA+ Q+AD Sbjct: 273 FAEAQIAD 280>XP_005264157 Length = 293 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 FAQEQVA 7 F QEQVA Sbjct: 9 FTQEQVA 15>NP_996895 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AQEQVADI 9 AQE+ AD+ Sbjct: 35 AQEKAADV 42>NP_036227 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AQEQVADI 9 AQE+ AD+ Sbjct: 35 AQEKAADV 42>NP_258260 Length = 690 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AQEQVADI 9 AQE+ AD+ Sbjct: 161 AQEKAADV 168>XP_006717827 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AQEQVADI 9 AQE+ AD+ Sbjct: 35 AQEKAADV 42>XP_006717826 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AQEQVADI 9 AQE+ AD+ Sbjct: 35 AQEKAADV 42>XP_006714867 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AQEQVADI 9 AQE+ AD+ Sbjct: 161 AQEKAADV 168>XP_006714866 Length = 647 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AQEQVADI 9 AQE+ AD+ Sbjct: 161 AQEKAADV 168>XP_005268581 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AQEQVADI 9 AQE+ AD+ Sbjct: 159 AQEKAADV 166>XP_006712486 Length = 1504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QEQVADI 9 QEQ+AD+ Sbjct: 329 QEQLADL 335>XP_006712485 Length = 1569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QEQVADI 9 QEQ+AD+ Sbjct: 394 QEQLADL 400Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.131 0.333 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 417,536 Number of extensions: 614 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |