Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001013433 20 390 NP_060785 20 390 NP_361014 20 390 NP_065871 17 3301 NP_079446 17 3301 NP_079146 17 3301 XP_005260528 17 3301 NP_001007026 16 5631 NP_004862 16 5631 NP_001007025 16 5631 XP_005258129 16 5631 XP_005258128 16 5631 XP_005258127 16 5631 XP_005274296 16 5631 NP_076941 16 5631 NP_001654 16 7355 NP_065916 16 7355 NP_001107869 16 7355 NP_705898 15 9605 NP_001269939 15 9605 NP_001269938 15 9605 NP_116575 15 9605 NP_057518 15 9605 NP_001276062 15 9605 NP_001002860 15 9605 NP_671736 15 9605 NP_055042 15 9605 NP_004458 15 9605 NP_963847 15 9605 NP_963846 15 9605 XP_006725229 15 9605 XP_006724371 15 9605 XP_005258196 15 9605 XP_006720258 15 9605 XP_005273507 15 9605 YP_003024029 15 9605>NP_001013433 Length = 589 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EYTSTAGLV 9 EYTST GLV Sbjct: 74 EYTSTTGLV 82>NP_060785 Length = 627 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EYTSTAGLV 9 EYTST GLV Sbjct: 112 EYTSTTGLV 120>NP_361014 Length = 707 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EYTSTAGLV 9 EYTST GLV Sbjct: 192 EYTSTTGLV 200>NP_065871 Length = 1659 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EYTSTAGL 8 EY STAG+ Sbjct: 858 EYVSTAGV 865>NP_079446 Length = 979 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EYTSTAGL 8 EY STAG+ Sbjct: 824 EYDSTAGI 831>NP_079146 Length = 1606 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EYTSTAGL 8 EY STAG+ Sbjct: 824 EYDSTAGI 831>XP_005260528 Length = 956 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EYTSTAGL 8 EY STAG+ Sbjct: 155 EYVSTAGV 162>NP_001007026 Length = 248 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EYTSTAGL 8 EYT++AG+ Sbjct: 88 EYTNSAGV 95>NP_004862 Length = 250 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EYTSTAGL 8 EYT++AG+ Sbjct: 90 EYTNSAGV 97>NP_001007025 Length = 185 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EYTSTAGL 8 EYT++AG+ Sbjct: 25 EYTNSAGV 32>XP_005258129 Length = 185 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EYTSTAGL 8 EYT++AG+ Sbjct: 25 EYTNSAGV 32>XP_005258128 Length = 298 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EYTSTAGL 8 EYT++AG+ Sbjct: 138 EYTNSAGV 145>XP_005258127 Length = 300 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EYTSTAGL 8 EYT++AG+ Sbjct: 140 EYTNSAGV 147>XP_005274296 Length = 635 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EYTSTAGLV 9 E T+T+GLV Sbjct: 413 EVTATSGLV 421>NP_076941 Length = 635 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EYTSTAGLV 9 E T+T+GLV Sbjct: 413 EVTATSGLV 421>NP_001654 Length = 175 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YTSTAGLV 9 YT T GL+ Sbjct: 78 YTGTQGLI 85>NP_065916 Length = 1008 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YTSTAGLV 9 YT T GLV Sbjct: 860 YTKTDGLV 867>NP_001107869 Length = 994 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YTSTAGLV 9 YT T GLV Sbjct: 846 YTKTDGLV 853>NP_705898 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 YTSTAGL 8 Y STAG+ Sbjct: 5 YNSTAGI 11>NP_001269939 Length = 996 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YTSTAGL 8 +T+TAGL Sbjct: 160 FTNTAGL 166>NP_001269938 Length = 1300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YTSTAGL 8 +T+TAGL Sbjct: 383 FTNTAGL 389>NP_116575 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YTSTAGL 8 +T+TAGL Sbjct: 407 FTNTAGL 413>NP_057518 Length = 1219 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YTSTAGL 8 +T+TAGL Sbjct: 383 FTNTAGL 389>NP_001276062 Length = 781 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TSTAGL 8 TSTAGL Sbjct: 477 TSTAGL 482>NP_001002860 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TSTAGL 8 TSTAGL Sbjct: 828 TSTAGL 833>NP_671736 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 EYTSTAG 7 EY+ TAG Sbjct: 206 EYSGTAG 212>NP_055042 Length = 659 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 YTSTAGL 8 YT+T GL Sbjct: 191 YTTTGGL 197>NP_004458 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 EYTSTAG 7 EY+ TAG Sbjct: 206 EYSGTAG 212>NP_963847 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 EYTSTAG 7 EY+ TAG Sbjct: 206 EYSGTAG 212>NP_963846 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 EYTSTAG 7 EY+ TAG Sbjct: 206 EYSGTAG 212>XP_006725229 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TSTAGL 8 TSTAGL Sbjct: 828 TSTAGL 833>XP_006724371 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 YTSTAGL 8 YT+T GL Sbjct: 145 YTTTGGL 151>XP_005258196 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EYTSTAGLV 9 EYT+ G+V Sbjct: 425 EYTARQGMV 433>XP_006720258 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TSTAGL 8 TSTAGL Sbjct: 828 TSTAGL 833>XP_005273507 Length = 362 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 EYTSTAG 7 EY+ TAG Sbjct: 256 EYSGTAG 262>YP_003024029 Length = 227 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 EYTSTAGLV 9 EYT GL+ Sbjct: 109 EYTDYGGLI 117Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.120 0.309 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 482,895 Number of extensions: 889 Number of successful extensions: 36 Number of sequences better than 10000.0: 36 Number of HSP's gapped: 36 Number of HSP's successfully gapped: 36 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |