Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 21 175 NP_001263689 21 175 NP_001119584 21 175 NP_001119590 21 175 NP_001263690 21 175 NP_001119587 21 175 NP_001263626 21 175 NP_997196 17 3301 NP_114480 17 3301 NP_114481 17 3301 NP_061737 17 3301 XP_006721755 17 3301 NP_001836 17 4312 NP_066000 17 4312 NP_002579 17 4312 NP_115778 17 4312 XP_006713781 17 4312 NP_573403 16 7355 NP_877496 16 7355 XP_006723917 16 7355 XP_005260553 16 7355 NP_065797 15 9605 NP_115515 15 9605 NP_001035100 15 9605 NP_061917 15 9605 XP_005259367 15 9605 XP_006723476 15 9605 XP_006723475 15 9605 XP_006720934 15 9605 XP_006712663 15 9605 XP_006712662 15 9605 XP_006712661 15 9605 XP_006712660 15 9605>NP_000537 Length = 393 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EYFTLRIRG 9 EYFTL+IRG Sbjct: 326 EYFTLQIRG 334>NP_001263689 Length = 354 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EYFTLRIRG 9 EYFTL+IRG Sbjct: 287 EYFTLQIRG 295>NP_001119584 Length = 393 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EYFTLRIRG 9 EYFTL+IRG Sbjct: 326 EYFTLQIRG 334>NP_001119590 Length = 354 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EYFTLRIRG 9 EYFTL+IRG Sbjct: 287 EYFTLQIRG 295>NP_001263690 Length = 354 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EYFTLRIRG 9 EYFTL+IRG Sbjct: 287 EYFTLQIRG 295>NP_001119587 Length = 261 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EYFTLRIRG 9 EYFTL+IRG Sbjct: 194 EYFTLQIRG 202>NP_001263626 Length = 234 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EYFTLRIRG 9 EYFTL+IRG Sbjct: 167 EYFTLQIRG 175>NP_997196 Length = 984 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EYFTLRIR 8 E+FTLR++ Sbjct: 238 EHFTLRVK 245>NP_114480 Length = 837 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YFTLRIRG 9 YF+L++RG Sbjct: 178 YFSLQLRG 185>NP_114481 Length = 750 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YFTLRIRG 9 YF+L++RG Sbjct: 178 YFSLQLRG 185>NP_061737 Length = 935 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YFTLRIRG 9 YF+L++RG Sbjct: 178 YFSLQLRG 185>XP_006721755 Length = 978 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EYFTLRIR 8 E+FTLR++ Sbjct: 232 EHFTLRVK 239>NP_001836 Length = 1669 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YFTLRIRG 9 YF LR++G Sbjct: 534 YFDLRLKG 541>NP_066000 Length = 771 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YFTLRIR 8 Y+T+RIR Sbjct: 541 YYTMRIR 547>NP_002579 Length = 934 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EYFTLRIR 8 EYF LR++ Sbjct: 178 EYFALRVQ 185>NP_115778 Length = 863 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EYFTLRIR 8 EYF LR++ Sbjct: 178 EYFALRVQ 185>XP_006713781 Length = 771 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YFTLRIR 8 Y+T+RIR Sbjct: 541 YYTMRIR 547>NP_573403 Length = 720 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EYFTLR 6 EY+TLR Sbjct: 47 EYYTLR 52>NP_877496 Length = 720 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EYFTLR 6 EY+TLR Sbjct: 47 EYYTLR 52>XP_006723917 Length = 720 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EYFTLR 6 EY+TLR Sbjct: 47 EYYTLR 52>XP_005260553 Length = 720 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EYFTLR 6 EY+TLR Sbjct: 47 EYYTLR 52>NP_065797 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 EYFTLRIRG 9 EYF +RG Sbjct: 70 EYFIAALRG 78>NP_115515 Length = 1050 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EYFTLRIR 8 EY T++IR Sbjct: 913 EYVTVKIR 920>NP_001035100 Length = 235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FTLRIR 8 FTLR+R Sbjct: 45 FTLRVR 50>NP_061917 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YFTLRIRG 9 YF RI+G Sbjct: 39 YFRARIKG 46>XP_005259367 Length = 854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EYFTLRIR 8 EY T++IR Sbjct: 717 EYVTVKIR 724>XP_006723476 Length = 979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EYFTLRIR 8 EY T++IR Sbjct: 913 EYVTVKIR 920>XP_006723475 Length = 1050 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EYFTLRIR 8 EY T++IR Sbjct: 913 EYVTVKIR 920>XP_006720934 Length = 296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 FTLRIR 8 FTLR+R Sbjct: 29 FTLRVR 34>XP_006712663 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YFTLRIRG 9 YF RI+G Sbjct: 95 YFRARIKG 102>XP_006712662 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YFTLRIRG 9 YF RI+G Sbjct: 95 YFRARIKG 102>XP_006712661 Length = 692 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YFTLRIRG 9 YF RI+G Sbjct: 95 YFRARIKG 102>XP_006712660 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YFTLRIRG 9 YF RI+G Sbjct: 95 YFRARIKG 102Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.158 0.477 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 424,473 Number of extensions: 529 Number of successful extensions: 33 Number of sequences better than 10000.0: 33 Number of HSP's gapped: 33 Number of HSP's successfully gapped: 33 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |