Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004963 21 175 XP_005251512 21 175 NP_055847 17 2528 XP_005266355 17 2528 XP_005266354 17 2528 XP_005266353 17 2528 XP_005266352 17 2528 NP_009041 17 4312 NP_115714 17 4312 NP_085150 17 4312 NP_001157968 17 4312 XP_005268084 17 4312 XP_005247674 17 4312 XP_006713762 17 4312 XP_006713761 17 4312 XP_006713760 17 4312 XP_006713759 17 4312 NP_001185574 16 5631 NP_001185573 16 5631 NP_477514 16 5631 NP_001003818 16 5631 NP_940974 16 5631 XP_005250968 16 5631 NP_689602 16 7355 NP_056180 16 7355 NP_001265225 16 7355 NP_001265224 16 7355 NP_001165160 16 7355 NP_892030 16 7355 NP_919278 16 7355 NP_542783 16 7355 NP_665879 16 7355 XP_006725243 16 7355 XP_006725242 16 7355 XP_006725241 16 7355 XP_006725240 16 7355 XP_005254220 16 7355 XP_006720455 16 7355 XP_005254219 16 7355 XP_006712953 16 7355 XP_006712952 16 7355 XP_006712951 16 7355 XP_006712460 16 7355 XP_006712459 16 7355 NP_057200 16 7355 NP_001020751 16 7355 NP_000282 15 9605 XP_005258876 15 9605 NP_001027006 15 9605>NP_004963 Length = 1132 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EVAKQLAWS 9 EVAKQLAW+ Sbjct: 652 EVAKQLAWA 660>XP_005251512 Length = 1132 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EVAKQLAWS 9 EVAKQLAW+ Sbjct: 652 EVAKQLAWA 660>NP_055847 Length = 1447 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 + AKQ+AW Sbjct: 428 DAAKQIAW 435>XP_005266355 Length = 1448 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 + AKQ+AW Sbjct: 428 DAAKQIAW 435>XP_005266354 Length = 1411 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 + AKQ+AW Sbjct: 428 DAAKQIAW 435>XP_005266353 Length = 1445 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 + AKQ+AW Sbjct: 428 DAAKQIAW 435>XP_005266352 Length = 1446 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 + AKQ+AW Sbjct: 428 DAAKQIAW 435>NP_009041 Length = 2627 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VAKQLAW 8 VAKQL W Sbjct: 796 VAKQLYW 802>NP_115714 Length = 129 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 +VAK LAW Sbjct: 122 KVAKGLAW 129>NP_085150 Length = 941 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 EVAKQLAW 8 ++AK+L+W Sbjct: 243 DIAKKLSW 250>NP_001157968 Length = 1854 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 +V K+LAW Sbjct: 1000 QVEKELAW 1007>XP_005268084 Length = 2627 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VAKQLAW 8 VAKQL W Sbjct: 796 VAKQLYW 802>XP_005247674 Length = 1089 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 +V K+LAW Sbjct: 235 QVEKELAW 242>XP_006713762 Length = 1197 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 +V K+LAW Sbjct: 1044 QVEKELAW 1051>XP_006713761 Length = 1554 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 +V K+LAW Sbjct: 700 QVEKELAW 707>XP_006713760 Length = 1847 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 +V K+LAW Sbjct: 993 QVEKELAW 1000>XP_006713759 Length = 1898 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 +V K+LAW Sbjct: 1044 QVEKELAW 1051>NP_001185574 Length = 313 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 +VAK+ AW Sbjct: 185 DVAKKTAW 192>NP_001185573 Length = 313 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 +VAK+ AW Sbjct: 185 DVAKKTAW 192>NP_477514 Length = 488 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 +VAK+ AW Sbjct: 360 DVAKKTAW 367>NP_001003818 Length = 516 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 +VAK+ AW Sbjct: 388 DVAKKTAW 395>NP_940974 Length = 591 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 AKQLAW 8 +KQLAW Sbjct: 437 SKQLAW 442>XP_005250968 Length = 492 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 AKQLAW 8 +KQLAW Sbjct: 437 SKQLAW 442>NP_689602 Length = 164 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 EVA++L W Sbjct: 81 EVAEELHW 88>NP_056180 Length = 333 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 EVAKQLAW 8 EVAK+ W Sbjct: 258 EVAKEQGW 265>NP_001265225 Length = 730 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 EVA++L W Sbjct: 81 EVAEELHW 88>NP_001265224 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 EVA++L W Sbjct: 135 EVAEELHW 142>NP_001165160 Length = 210 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 EVAKQLAW 8 EVAK+ W Sbjct: 135 EVAKEQGW 142>NP_892030 Length = 500 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EVAKQLAWS 9 EVAK+ W+ Sbjct: 383 EVAKKTKWT 391>NP_919278 Length = 1925 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 EVA++L W Sbjct: 146 EVAEELHW 153>NP_542783 Length = 341 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EVAKQLAWS 9 EVAK+ W+ Sbjct: 224 EVAKKTKWT 232>NP_665879 Length = 349 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 AKQLAW 8 AKQL W Sbjct: 156 AKQLVW 161>XP_006725243 Length = 296 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EVAKQLAWS 9 EVAK+ W+ Sbjct: 179 EVAKKTKWT 187>XP_006725242 Length = 341 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EVAKQLAWS 9 EVAK+ W+ Sbjct: 224 EVAKKTKWT 232>XP_006725241 Length = 404 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EVAKQLAWS 9 EVAK+ W+ Sbjct: 287 EVAKKTKWT 295>XP_006725240 Length = 500 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EVAKQLAWS 9 EVAK+ W+ Sbjct: 383 EVAKKTKWT 391>XP_005254220 Length = 296 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EVAKQLAWS 9 EVAK+ W+ Sbjct: 179 EVAKKTKWT 187>XP_006720455 Length = 341 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EVAKQLAWS 9 EVAK+ W+ Sbjct: 224 EVAKKTKWT 232>XP_005254219 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EVAKQLAWS 9 EVAK+ W+ Sbjct: 305 EVAKKTKWT 313>XP_006712953 Length = 1402 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 KQLAW 8 KQLAW Sbjct: 1365 KQLAW 1369>XP_006712952 Length = 1524 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 KQLAW 8 KQLAW Sbjct: 1365 KQLAW 1369>XP_006712951 Length = 2119 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 KQLAW 8 KQLAW Sbjct: 1365 KQLAW 1369>XP_006712460 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 EVA++L W Sbjct: 135 EVAEELHW 142>XP_006712459 Length = 1914 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 EVA++L W Sbjct: 135 EVAEELHW 142>NP_057200 Length = 426 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 AKQLAW 8 AKQL W Sbjct: 156 AKQLVW 161>NP_001020751 Length = 296 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 EVAKQLAW 8 EVAK+ W Sbjct: 221 EVAKEQGW 228>NP_000282 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 AKQLAWS 9 AKQ+ W+ Sbjct: 331 AKQIVWN 337>XP_005258876 Length = 818 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 EVAKQLAW 8 E+A+ L+W Sbjct: 31 EIARLLSW 38>NP_001027006 Length = 1149 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 KQLAWS 9 KQ+AW+ Sbjct: 1103 KQIAWN 1108Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.114 0.357 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 517,184 Number of extensions: 553 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |