Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245200 17 2528 NP_000240 17 2528 NP_061119 17 2528 XP_005265218 17 2528 NP_001679 16 5631 NP_006059 16 5631 NP_004637 16 5631 XP_005259018 16 5631 XP_005262694 16 5631 XP_005262693 16 5631 XP_005270986 16 5631 NP_001006659 16 7355 NP_001868 16 7355 NP_000181 16 7355 NP_001019553 16 7355 NP_056125 16 7355 NP_996792 16 7355 NP_000441 16 7355 NP_001028752 16 7355 NP_079385 16 7355 NP_001157207 16 7355 NP_055299 16 7355 XP_006725415 16 7355 XP_006725414 16 7355 XP_006722171 16 7355 XP_006722170 16 7355 XP_005271590 16 7355 XP_005271589 16 7355 XP_005271588 16 7355 XP_006716385 16 7355 XP_006716384 16 7355 XP_006716383 16 7355 XP_006716382 16 7355 XP_006716381 16 7355 NP_057434 15 9605 NP_891989 15 9605 NP_065972 15 9605 NP_058640 15 9605 NP_891991 15 9605 NP_000290 15 9605 NP_001005337 15 9605 NP_057605 15 9605 XP_005256248 15 9605 XP_006720224 15 9605 XP_005267794 15 9605 XP_005267793 15 9605 XP_005267792 15 9605 XP_006720223 15 9605 NP_060918 15 9605 NP_113678 15 9605>NP_001245200 Length = 687 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETVVNCIAA 9 ETVVN IAA Sbjct: 13 ETVVNRIAA 21>NP_000240 Length = 756 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETVVNCIAA 9 ETVVN IAA Sbjct: 13 ETVVNRIAA 21>NP_061119 Length = 372 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETVVNCIAA 9 ET+ NC++A Sbjct: 292 ETIKNCLSA 300>XP_005265218 Length = 687 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETVVNCIAA 9 ETVVN IAA Sbjct: 13 ETVVNRIAA 21>NP_001679 Length = 256 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ETVVNCIA 8 ET+ CIA Sbjct: 234 ETIAKCIA 241>NP_006059 Length = 796 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 ETVVNCI 7 E ++NCI Sbjct: 686 ENIINCI 692>NP_004637 Length = 1241 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETVVNCIA 8 E VVNC++ Sbjct: 155 EYVVNCVS 162>XP_005259018 Length = 1128 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETVVNCIA 8 E VVNC++ Sbjct: 42 EYVVNCVS 49>XP_005262694 Length = 796 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 ETVVNCI 7 E ++NCI Sbjct: 686 ENIINCI 692>XP_005262693 Length = 796 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 ETVVNCI 7 E ++NCI Sbjct: 686 ENIINCI 692>XP_005270986 Length = 403 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ETVVNCIA 8 ET+ CIA Sbjct: 381 ETIAKCIA 388>NP_001006659 Length = 1092 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 ETVVNCIAA 9 E ++NC+++ Sbjct: 192 EKIINCLSS 200>NP_001868 Length = 1033 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 ETVVNCIAA 9 E ++NC+++ Sbjct: 192 EKIINCLSS 200>NP_000181 Length = 361 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETVVNCIA 8 ET++ CIA Sbjct: 242 ETLLRCIA 249>NP_001019553 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETVVNCIA 8 ET++ CIA Sbjct: 225 ETLLRCIA 232>NP_056125 Length = 1047 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VNCIAA 9 +NC+AA Sbjct: 892 INCVAA 897>NP_996792 Length = 513 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VNCIAA 9 +NC+AA Sbjct: 358 INCVAA 363>NP_000441 Length = 610 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ETVVNCIA 8 E +VNC A Sbjct: 175 EQIVNCTA 182>NP_001028752 Length = 317 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ETVVNCIAA 9 ETV+ C+ A Sbjct: 49 ETVLRCLQA 57>NP_079385 Length = 770 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ETVVNCIAA 9 ETV+ C+ A Sbjct: 49 ETVLRCLQA 57>NP_001157207 Length = 970 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ETVVNCIAA 9 ETV+ C+ A Sbjct: 49 ETVLRCLQA 57>NP_055299 Length = 460 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 ETVVNC 6 ETV NC Sbjct: 234 ETVTNC 239>XP_006725415 Length = 990 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ETVVNCIAA 9 ETV+ C+ A Sbjct: 49 ETVLRCLQA 57>XP_006725414 Length = 1034 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ETVVNCIAA 9 ETV+ C+ A Sbjct: 49 ETVLRCLQA 57>XP_006722171 Length = 972 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ETVVNCIAA 9 ETV+ C+ A Sbjct: 49 ETVLRCLQA 57>XP_006722170 Length = 1016 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ETVVNCIAA 9 ETV+ C+ A Sbjct: 49 ETVLRCLQA 57>XP_005271590 Length = 343 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETVVNCIA 8 ET++ CIA Sbjct: 224 ETLLRCIA 231>XP_005271589 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETVVNCIA 8 ET++ CIA Sbjct: 225 ETLLRCIA 232>XP_005271588 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETVVNCIA 8 ET++ CIA Sbjct: 225 ETLLRCIA 232>XP_006716385 Length = 488 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VNCIAA 9 +NC+AA Sbjct: 333 INCVAA 338>XP_006716384 Length = 488 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VNCIAA 9 +NC+AA Sbjct: 333 INCVAA 338>XP_006716383 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VNCIAA 9 +NC+AA Sbjct: 356 INCVAA 361>XP_006716382 Length = 571 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VNCIAA 9 +NC+AA Sbjct: 416 INCVAA 421>XP_006716381 Length = 1014 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 VNCIAA 9 +NC+AA Sbjct: 859 INCVAA 864>NP_057434 Length = 1377 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ETVVNC 6 ETVV+C Sbjct: 642 ETVVSC 647>NP_891989 Length = 2046 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ETVVNC 6 ETVV+C Sbjct: 642 ETVVSC 647>NP_065972 Length = 2133 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ETVVNC 6 ETVV+C Sbjct: 642 ETVVSC 647>NP_058640 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 TVVNC 6 TVVNC Sbjct: 28 TVVNC 32>NP_891991 Length = 2090 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ETVVNC 6 ETVV+C Sbjct: 642 ETVVSC 647>NP_000290 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VVNCIAA 9 V NC+AA Sbjct: 458 VQNCVAA 464>NP_001005337 Length = 726 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VVNCIAA 9 V NC+AA Sbjct: 437 VQNCVAA 443>NP_057605 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 ETVVNC 6 +TV+NC Sbjct: 264 KTVINC 269>XP_005256248 Length = 808 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TVVNCIAA 9 T+V C+A+ Sbjct: 703 TIVTCLAS 710>XP_006720224 Length = 1276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ETVVNC 6 ETVV+C Sbjct: 642 ETVVSC 647>XP_005267794 Length = 1379 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ETVVNC 6 ETVV+C Sbjct: 642 ETVVSC 647>XP_005267793 Length = 1390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ETVVNC 6 ETVV+C Sbjct: 612 ETVVSC 617>XP_005267792 Length = 1420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ETVVNC 6 ETVV+C Sbjct: 642 ETVVSC 647>XP_006720223 Length = 1989 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ETVVNC 6 ETVV+C Sbjct: 642 ETVVSC 647>NP_060918 Length = 1230 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TVVNCIAA 9 T + CIAA Sbjct: 233 TYIQCIAA 240>NP_113678 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TVVNCIAA 9 T+V C+A+ Sbjct: 747 TIVTCLAS 754Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.125 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 553,168 Number of extensions: 846 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |