Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value XP_005257495 17 4312 XP_005257489 17 4312 NP_821174 16 5631 NP_060340 16 5631 NP_004906 16 7355 NP_997511 16 7355 NP_058198 16 7355 NP_997512 16 7355 NP_997510 16 7355 NP_997057 16 7355 NP_004990 16 7355 XP_005248783 16 7355 XP_005248782 16 7355 XP_005248781 16 7355 XP_005248779 16 7355 XP_005248778 16 7355 XP_005248777 16 7355 XP_005248776 16 7355 NP_116251 16 7355 NP_001135977 16 7355 NP_071452 16 7355 NP_116222 15 9605 NP_001138630 15 9605 NP_006611 15 9605 NP_001136028 15 9605 NP_036616 15 9605 NP_001136029 15 9605 NP_001269285 15 9605 NP_036617 15 9605 NP_055062 15 9605 NP_599028 15 9605 NP_439897 15 9605 XP_006709995 15 9605 XP_006715383 15 9605 XP_006714485 15 9605 XP_005263418 15 9605 XP_005263417 15 9605 XP_006714484 15 9605 XP_005263416 15 9605 XP_006714483 15 9605 XP_005263415 15 9605 XP_005245608 15 9605 NP_997234 15 9605>XP_005257495 Length = 265 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGAQRKR 8 TGA+RKR Sbjct: 3 TGARRKR 9>XP_005257489 Length = 424 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGAQRKR 8 TGA+RKR Sbjct: 3 TGARRKR 9>NP_821174 Length = 1023 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ETGAQRKRI 9 E G +RKR+ Sbjct: 955 EAGGRRKRV 963>NP_060340 Length = 1024 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ETGAQRKRI 9 E G +RKR+ Sbjct: 956 EAGGRRKRV 964>NP_004906 Length = 678 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TGAQRKRI 9 +G QRKR+ Sbjct: 218 SGGQRKRL 225>NP_997511 Length = 644 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TGAQRKRI 9 +G QRKR+ Sbjct: 196 SGGQRKRL 203>NP_058198 Length = 666 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TGAQRKRI 9 +G QRKR+ Sbjct: 218 SGGQRKRL 225>NP_997512 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TGAQRKRI 9 +G QRKR+ Sbjct: 215 SGGQRKRL 222>NP_997510 Length = 668 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TGAQRKRI 9 +G QRKR+ Sbjct: 220 SGGQRKRL 227>NP_997057 Length = 677 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TGAQRKRI 9 +G QRKR+ Sbjct: 229 SGGQRKRL 236>NP_004990 Length = 1285 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ETGAQRKR 8 ETG RKR Sbjct: 1233 ETGLTRKR 1240>XP_005248783 Length = 1253 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ETGAQRKR 8 ETG RKR Sbjct: 1201 ETGLTRKR 1208>XP_005248782 Length = 1262 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ETGAQRKR 8 ETG RKR Sbjct: 1210 ETGLTRKR 1217>XP_005248781 Length = 1272 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ETGAQRKR 8 ETG RKR Sbjct: 1220 ETGLTRKR 1227>XP_005248779 Length = 1276 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ETGAQRKR 8 ETG RKR Sbjct: 1224 ETGLTRKR 1231>XP_005248778 Length = 1281 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ETGAQRKR 8 ETG RKR Sbjct: 1229 ETGLTRKR 1236>XP_005248777 Length = 1285 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ETGAQRKR 8 ETG RKR Sbjct: 1233 ETGLTRKR 1240>XP_005248776 Length = 1294 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ETGAQRKR 8 ETG RKR Sbjct: 1242 ETGLTRKR 1249>NP_116251 Length = 642 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ETGAQRKRI 9 E G QRK++ Sbjct: 108 EVGTQRKKM 116>NP_001135977 Length = 646 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TGAQRKRI 9 +G QRKR+ Sbjct: 202 SGGQRKRL 209>NP_071452 Length = 646 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TGAQRKRI 9 +G QRKR+ Sbjct: 202 SGGQRKRL 209>NP_116222 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TGAQRKRI 9 TG RKR+ Sbjct: 5 TGGSRKRL 12>NP_001138630 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETGAQRKR 8 ETG +R+R Sbjct: 273 ETGEERER 280>NP_006611 Length = 684 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETGAQRKR 8 ETG +R+R Sbjct: 315 ETGEERER 322>NP_001136028 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ETGAQRKRI 9 E GAQ +RI Sbjct: 98 ERGAQDRRI 106>NP_036616 Length = 724 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ETGAQRKRI 9 E GAQ +RI Sbjct: 97 ERGAQDRRI 105>NP_001136029 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ETGAQRKRI 9 E GAQ +RI Sbjct: 11 ERGAQDRRI 19>NP_001269285 Length = 656 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TGAQRKR 8 TGA+RK+ Sbjct: 2 TGAKRKK 8>NP_036617 Length = 709 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ETGAQRKRI 9 E GAQ +RI Sbjct: 82 ERGAQDRRI 90>NP_055062 Length = 1499 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ETGAQRKRI 9 +TG +KR+ Sbjct: 948 QTGGHKKRV 956>NP_599028 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TGAQRKR 8 TGA+RK+ Sbjct: 2 TGAKRKK 8>NP_439897 Length = 656 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TGAQRKR 8 TGA+RK+ Sbjct: 2 TGAKRKK 8>XP_006709995 Length = 46 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETGAQRKR 8 ETG +R+R Sbjct: 11 ETGRERER 18>XP_006715383 Length = 510 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETGAQRKR 8 ETG +R+R Sbjct: 315 ETGEERER 322>XP_006714485 Length = 1585 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ETGAQRKRI 9 +TG +KR+ Sbjct: 993 QTGGHKKRV 1001>XP_005263418 Length = 1654 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ETGAQRKRI 9 +TG +KR+ Sbjct: 1103 QTGGHKKRV 1111>XP_005263417 Length = 1660 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ETGAQRKRI 9 +TG +KR+ Sbjct: 1109 QTGGHKKRV 1117>XP_006714484 Length = 1685 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ETGAQRKRI 9 +TG +KR+ Sbjct: 1109 QTGGHKKRV 1117>XP_005263416 Length = 1693 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ETGAQRKRI 9 +TG +KR+ Sbjct: 1101 QTGGHKKRV 1109>XP_006714483 Length = 1695 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ETGAQRKRI 9 +TG +KR+ Sbjct: 1103 QTGGHKKRV 1111>XP_005263415 Length = 1701 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ETGAQRKRI 9 +TG +KR+ Sbjct: 1109 QTGGHKKRV 1117>XP_005245608 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TGAQRKRI 9 TG RKR+ Sbjct: 5 TGGSRKRL 12>NP_997234 Length = 981 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GAQRKRI 9 GAQR+R+ Sbjct: 104 GAQRERL 110Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.128 0.328 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 578,722 Number of extensions: 1159 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |