Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005350 20 299 NP_115582 19 869 XP_005256255 19 869 XP_006721361 19 869 XP_005256254 19 869 XP_005256253 19 869 XP_005256252 19 869 XP_005256251 19 869 XP_006721360 19 869 XP_005256250 19 869 NP_000543 17 3301 NP_065765 17 3301 NP_079435 17 4312 NP_037365 16 5631 NP_055981 16 5631 NP_631941 16 5631 NP_055565 16 5631 NP_001139487 16 5631 XP_005246523 16 5631 XP_005246522 16 5631 NP_060052 16 7355 XP_005245372 16 7355 NP_075380 15 9605 NP_877439 15 9605 NP_001269042 15 9605 NP_001269041 15 9605 NP_002763 15 9605 NP_001132929 15 9605 NP_736610 15 9605 NP_079219 15 9605 NP_003926 15 9605 NP_060959 15 9605 NP_000674 15 9605 XP_006724415 15 9605 XP_005261871 15 9605 XP_006724414 15 9605 XP_005261868 15 9605 XP_006724413 15 9605 XP_006724412 15 9605 XP_006719367 15 9605 XP_006719366 15 9605 XP_006719365 15 9605 XP_005262727 15 9605 XP_005262726 15 9605 XP_005245393 15 9605 XP_006711515 15 9605 XP_006711514 15 9605 XP_006711513 15 9605 NP_060389 15 9605 NP_056134 15 9605>NP_005350 Length = 552 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETFKVTSSC 9 ETFKV SSC Sbjct: 337 ETFKVPSSC 345>NP_115582 Length = 1866 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ETFKVTSSC 9 +TF++TSSC Sbjct: 1497 KTFRLTSSC 1505>XP_005256255 Length = 1809 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ETFKVTSSC 9 +TF++TSSC Sbjct: 1440 KTFRLTSSC 1448>XP_006721361 Length = 1836 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ETFKVTSSC 9 +TF++TSSC Sbjct: 1467 KTFRLTSSC 1475>XP_005256254 Length = 1837 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ETFKVTSSC 9 +TF++TSSC Sbjct: 1468 KTFRLTSSC 1476>XP_005256253 Length = 1838 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ETFKVTSSC 9 +TF++TSSC Sbjct: 1469 KTFRLTSSC 1477>XP_005256252 Length = 1865 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ETFKVTSSC 9 +TF++TSSC Sbjct: 1496 KTFRLTSSC 1504>XP_005256251 Length = 1866 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ETFKVTSSC 9 +TF++TSSC Sbjct: 1497 KTFRLTSSC 1505>XP_006721360 Length = 1866 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ETFKVTSSC 9 +TF++TSSC Sbjct: 1497 KTFRLTSSC 1505>XP_005256250 Length = 1866 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ETFKVTSSC 9 +TF++TSSC Sbjct: 1497 KTFRLTSSC 1505>NP_000543 Length = 2813 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ETFKVTSSC 9 + FK+T SC Sbjct: 1964 QNFKLTGSC 1972>NP_065765 Length = 529 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ETFKVTSSC 9 E FK +SSC Sbjct: 369 EAFKSSSSC 377>NP_079435 Length = 301 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ETFKVTSSC 9 ET+ V SSC Sbjct: 109 ETYLVPSSC 117>NP_037365 Length = 545 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TFKVTSSC 9 TFK+ S C Sbjct: 518 TFKLASGC 525>NP_055981 Length = 377 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TFKVTSSC 9 TF VT++C Sbjct: 118 TFAVTTTC 125>NP_631941 Length = 377 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TFKVTSSC 9 TF VT++C Sbjct: 118 TFAVTTTC 125>NP_055565 Length = 846 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ETFKVTSSC 9 ET K+TS C Sbjct: 440 ETEKLTSHC 448>NP_001139487 Length = 842 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ETFKVTSSC 9 ET K+TS C Sbjct: 440 ETEKLTSHC 448>XP_005246523 Length = 381 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TFKVTSSC 9 TFK+ S C Sbjct: 354 TFKLASGC 361>XP_005246522 Length = 524 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TFKVTSSC 9 TFK+ S C Sbjct: 497 TFKLASGC 504>NP_060052 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ETFKVTSSC 9 E F++ S+C Sbjct: 57 ERFRIASAC 65>XP_005245372 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 ETFKVTSSC 9 E F++ S+C Sbjct: 57 ERFRIASAC 65>NP_075380 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVTSSC 9 KVT+SC Sbjct: 38 KVTTSC 43>NP_877439 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FKVTSSC 9 FKV S+C Sbjct: 320 FKVLSNC 326>NP_001269042 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FKVTSSC 9 FK+TS C Sbjct: 52 FKMTSVC 58>NP_001269041 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FKVTSSC 9 FK+TS C Sbjct: 52 FKMTSVC 58>NP_002763 Length = 1019 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TFKVTS 7 TFK+TS Sbjct: 61 TFKITS 66>NP_001132929 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVTSSC 9 K+TSSC Sbjct: 55 KLTSSC 60>NP_736610 Length = 1409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVTSSC 9 KVTS+C Sbjct: 74 KVTSAC 79>NP_079219 Length = 296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FKVTSSC 9 FK+ SSC Sbjct: 94 FKMCSSC 100>NP_003926 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FKVTSSC 9 FK+TS C Sbjct: 52 FKMTSVC 58>NP_060959 Length = 2964 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVTSSC 9 K+TSSC Sbjct: 1785 KLTSSC 1790>NP_000674 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ETFKVTSSC 9 ET+ + SSC Sbjct: 207 ETWYILSSC 215>XP_006724415 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FKVTSSC 9 FK+TS C Sbjct: 52 FKMTSVC 58>XP_005261871 Length = 708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FKVTSSC 9 FK+TS C Sbjct: 52 FKMTSVC 58>XP_006724414 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FKVTSSC 9 FK+TS C Sbjct: 52 FKMTSVC 58>XP_005261868 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FKVTSSC 9 FK+TS C Sbjct: 52 FKMTSVC 58>XP_006724413 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FKVTSSC 9 FK+TS C Sbjct: 52 FKMTSVC 58>XP_006724412 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FKVTSSC 9 FK+TS C Sbjct: 52 FKMTSVC 58>XP_006719367 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVTSSC 9 KVTS+C Sbjct: 84 KVTSAC 89>XP_006719366 Length = 1418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVTSSC 9 KVTS+C Sbjct: 74 KVTSAC 79>XP_006719365 Length = 1428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVTSSC 9 KVTS+C Sbjct: 84 KVTSAC 89>XP_005262727 Length = 280 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FKVTSSC 9 FK+ SSC Sbjct: 94 FKMCSSC 100>XP_005262726 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FKVTSSC 9 FK+ SSC Sbjct: 94 FKMCSSC 100>XP_005245393 Length = 2663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVTSSC 9 K+TSSC Sbjct: 1785 KLTSSC 1790>XP_006711515 Length = 2904 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVTSSC 9 K+TSSC Sbjct: 1785 KLTSSC 1790>XP_006711514 Length = 2964 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVTSSC 9 K+TSSC Sbjct: 1785 KLTSSC 1790>XP_006711513 Length = 2964 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVTSSC 9 K+TSSC Sbjct: 1785 KLTSSC 1790>NP_060389 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVTSSC 9 K+TSSC Sbjct: 285 KLTSSC 290>NP_056134 Length = 1419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVTSSC 9 KVTS+C Sbjct: 84 KVTSAC 89Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.116 0.338 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 454,117 Number of extensions: 981 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |