Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 18 1135 XP_005262424 18 1135 NP_078787 17 4312 NP_061836 16 5631 NP_387505 16 5631 XP_005261051 16 5631 NP_003310 16 7355 NP_597676 16 7355 NP_001243779 16 7355 NP_596869 16 7355 NP_065770 16 7355 XP_005246888 16 7355 XP_006712788 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 NP_001254479 16 7355 NP_597681 16 7355 NP_005041 15 9605 XP_005268010 15 9605 XP_005268011 15 9605 XP_005268009 15 9605 XP_005268008 15 9605 XP_005268003 15 9605 XP_005268006 15 9605 XP_005267999 15 9605 XP_005267997 15 9605 XP_005267998 15 9605 XP_005267996 15 9605 XP_006720286 15 9605>NP_722576 Length = 3080 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESTSALTAY 9 ESTSAL AY Sbjct: 1381 ESTSALPAY 1389>XP_005262424 Length = 2875 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESTSALTAY 9 ESTSAL AY Sbjct: 1176 ESTSALPAY 1184>NP_078787 Length = 603 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ESTSALTAY 9 +ST+ALT Y Sbjct: 209 QSTAALTLY 217>NP_061836 Length = 2320 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ESTSALTAY 9 +STS+ TAY Sbjct: 1478 QSTSSRTAY 1486>NP_387505 Length = 2269 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ESTSALTAY 9 +STS+ TAY Sbjct: 1478 QSTSSRTAY 1486>XP_005261051 Length = 2242 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ESTSALTAY 9 +STS+ TAY Sbjct: 1400 QSTSSRTAY 1408>NP_003310 Length = 26926 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ESTSALTA 8 EST A+TA Sbjct: 16030 ESTGAITA 16037>NP_597676 Length = 27051 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ESTSALTA 8 EST A+TA Sbjct: 16155 ESTGAITA 16162>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ESTSALTA 8 EST A+TA Sbjct: 23454 ESTGAITA 23461>NP_596869 Length = 33423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ESTSALTA 8 EST A+TA Sbjct: 22527 ESTGAITA 22534>NP_065770 Length = 2036 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 STSALTAY 9 S+SAL+AY Sbjct: 144 SSSALSAY 151>XP_005246888 Length = 22663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ESTSALTA 8 EST A+TA Sbjct: 11767 ESTGAITA 11774>XP_006712788 Length = 24022 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ESTSALTA 8 EST A+TA Sbjct: 13126 ESTGAITA 13133>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ESTSALTA 8 EST A+TA Sbjct: 23082 ESTGAITA 23089>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ESTSALTA 8 EST A+TA Sbjct: 24588 ESTGAITA 24595>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ESTSALTA 8 EST A+TA Sbjct: 25095 ESTGAITA 25102>NP_597681 Length = 27118 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ESTSALTA 8 EST A+TA Sbjct: 16222 ESTGAITA 16229>NP_005041 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ESTSALT 7 E+TSALT Sbjct: 549 EATSALT 555>XP_005268010 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ESTSALT 7 E+TSALT Sbjct: 286 EATSALT 292>XP_005268011 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ESTSALT 7 E+TSALT Sbjct: 286 EATSALT 292>XP_005268009 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ESTSALT 7 E+TSALT Sbjct: 286 EATSALT 292>XP_005268008 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ESTSALT 7 E+TSALT Sbjct: 286 EATSALT 292>XP_005268003 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ESTSALT 7 E+TSALT Sbjct: 390 EATSALT 396>XP_005268006 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ESTSALT 7 E+TSALT Sbjct: 390 EATSALT 396>XP_005267999 Length = 468 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ESTSALT 7 E+TSALT Sbjct: 411 EATSALT 417>XP_005267997 Length = 468 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ESTSALT 7 E+TSALT Sbjct: 411 EATSALT 417>XP_005267998 Length = 468 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ESTSALT 7 E+TSALT Sbjct: 411 EATSALT 417>XP_005267996 Length = 468 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ESTSALT 7 E+TSALT Sbjct: 411 EATSALT 417>XP_006720286 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ESTSALT 7 E+TSALT Sbjct: 462 EATSALT 468Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.290 0.0985 0.227 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 253,193 Number of extensions: 332 Number of successful extensions: 29 Number of sequences better than 10000.0: 29 Number of HSP's gapped: 29 Number of HSP's successfully gapped: 29 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |