Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115927 19 665 NP_079410 17 3301 NP_000683 17 3301 XP_005256233 17 3301 XP_005256232 17 3301 XP_005256231 17 3301 XP_005256229 17 3301 XP_005256228 17 3301 XP_005256227 17 3301 XP_006721346 17 3301 XP_005256226 17 3301 XP_006721345 17 3301 XP_006721344 17 3301 XP_006721343 17 3301 XP_005256225 17 3301 XP_006710237 17 3301 NP_003602 17 4312 XP_005274666 17 4312 XP_005274664 17 4312 XP_005274663 17 4312 XP_005274662 17 4312 XP_005274661 17 4312 XP_005274660 17 4312 XP_005274659 17 4312 XP_005274658 17 4312 XP_005274657 17 4312 XP_005274656 17 4312 NP_060050 16 5631 NP_079464 16 5631 NP_001139107 16 5631 XP_005269983 16 5631 XP_005269982 16 5631 XP_006717970 16 5631 NP_115936 16 7355 NP_001263309 16 7355 NP_057733 16 7355 NP_065928 16 7355 NP_001147135 16 7355 NP_001147107 16 7355 XP_005256527 16 7355 XP_005263227 16 7355 NP_001147057 16 7355 NP_001146918 16 7355 NP_001146956 16 7355 NP_006735 15 9605 NP_079452 15 9605 XP_005261469 15 9605 XP_006723617 15 9605 XP_005260737 15 9605 XP_005260736 15 9605 XP_006723616 15 9605 XP_006723615 15 9605 XP_005260735 15 9605 XP_005270080 15 9605 NP_055107 15 9605>NP_115927 Length = 1321 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 ER RLLNRV Sbjct: 697 ERARLLNRV 705>NP_079410 Length = 2881 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ERVRLLNR 8 ERV+L+NR Sbjct: 2543 ERVQLINR 2550>NP_000683 Length = 517 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 ER RLLNR+ Sbjct: 100 ERGRLLNRL 108>XP_005256233 Length = 2391 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ERVRLLNR 8 ERV+L+NR Sbjct: 2053 ERVQLINR 2060>XP_005256232 Length = 2424 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ERVRLLNR 8 ERV+L+NR Sbjct: 2086 ERVQLINR 2093>XP_005256231 Length = 2573 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ERVRLLNR 8 ERV+L+NR Sbjct: 2560 ERVQLINR 2567>XP_005256229 Length = 2881 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ERVRLLNR 8 ERV+L+NR Sbjct: 2543 ERVQLINR 2550>XP_005256228 Length = 2882 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ERVRLLNR 8 ERV+L+NR Sbjct: 2544 ERVQLINR 2551>XP_005256227 Length = 2897 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ERVRLLNR 8 ERV+L+NR Sbjct: 2559 ERVQLINR 2566>XP_006721346 Length = 2898 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ERVRLLNR 8 ERV+L+NR Sbjct: 2560 ERVQLINR 2567>XP_005256226 Length = 2898 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ERVRLLNR 8 ERV+L+NR Sbjct: 2560 ERVQLINR 2567>XP_006721345 Length = 2898 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ERVRLLNR 8 ERV+L+NR Sbjct: 2560 ERVQLINR 2567>XP_006721344 Length = 2898 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ERVRLLNR 8 ERV+L+NR Sbjct: 2560 ERVQLINR 2567>XP_006721343 Length = 2898 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ERVRLLNR 8 ERV+L+NR Sbjct: 2560 ERVQLINR 2567>XP_005256225 Length = 2898 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ERVRLLNR 8 ERV+L+NR Sbjct: 2560 ERVQLINR 2567>XP_006710237 Length = 274 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ERVRLLNR 8 ERVRLL R Sbjct: 51 ERVRLLER 58>NP_003602 Length = 1012 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E +RLLNR+ Sbjct: 464 ENLRLLNRL 472>XP_005274666 Length = 550 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E +RLLNR+ Sbjct: 39 ENLRLLNRL 47>XP_005274664 Length = 872 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E +RLLNR+ Sbjct: 324 ENLRLLNRL 332>XP_005274663 Length = 964 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E +RLLNR+ Sbjct: 416 ENLRLLNRL 424>XP_005274662 Length = 971 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E +RLLNR+ Sbjct: 424 ENLRLLNRL 432>XP_005274661 Length = 972 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E +RLLNR+ Sbjct: 424 ENLRLLNRL 432>XP_005274660 Length = 979 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E +RLLNR+ Sbjct: 431 ENLRLLNRL 439>XP_005274659 Length = 982 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E +RLLNR+ Sbjct: 471 ENLRLLNRL 479>XP_005274658 Length = 1011 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E +RLLNR+ Sbjct: 464 ENLRLLNRL 472>XP_005274657 Length = 1018 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E +RLLNR+ Sbjct: 471 ENLRLLNRL 479>XP_005274656 Length = 1019 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E +RLLNR+ Sbjct: 471 ENLRLLNRL 479>NP_060050 Length = 708 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ERVRLLNR 8 + VRLLNR Sbjct: 298 DEVRLLNR 305>NP_079464 Length = 580 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 ER+R LN+V Sbjct: 352 ERLRKLNKV 360>NP_001139107 Length = 562 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 ER+R LN+V Sbjct: 352 ERLRKLNKV 360>XP_005269983 Length = 708 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ERVRLLNR 8 + VRLLNR Sbjct: 298 DEVRLLNR 305>XP_005269982 Length = 734 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ERVRLLNR 8 + VRLLNR Sbjct: 324 DEVRLLNR 331>XP_006717970 Length = 734 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ERVRLLNR 8 + VRLLNR Sbjct: 324 DEVRLLNR 331>NP_115936 Length = 122 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E+ RL+N+V Sbjct: 59 EKTRLINQV 67>NP_001263309 Length = 851 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ERVRLLNR 8 ER+ +LNR Sbjct: 517 ERITMLNR 524>NP_057733 Length = 851 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ERVRLLNR 8 ER+ +LNR Sbjct: 517 ERITMLNR 524>NP_065928 Length = 4427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ERVRLLNR 8 ER+RLL++ Sbjct: 699 ERIRLLDK 706>NP_001147135 Length = 158 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E+ RL+N+V Sbjct: 95 EKTRLINQV 103>NP_001147107 Length = 121 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E+ RL+N+V Sbjct: 58 EKTRLINQV 66>XP_005256527 Length = 4427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ERVRLLNR 8 ER+RLL++ Sbjct: 699 ERIRLLDK 706>XP_005263227 Length = 181 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E+ RL+N+V Sbjct: 118 EKTRLINQV 126>NP_001147057 Length = 122 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E+ RL+N+V Sbjct: 59 EKTRLINQV 67>NP_001146918 Length = 122 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E+ RL+N+V Sbjct: 59 EKTRLINQV 67>NP_001146956 Length = 159 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E+ RL+N+V Sbjct: 96 EKTRLINQV 104>NP_006735 Length = 201 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RVRLLN 7 RVRLLN Sbjct: 78 RVRLLN 83>NP_079452 Length = 1382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E+VR LN++ Sbjct: 1363 EKVRALNKL 1371>XP_005261469 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ERVRLLNR 8 E VR++NR Sbjct: 137 ETVRIINR 144>XP_006723617 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E+VR LN++ Sbjct: 743 EKVRALNKL 751>XP_005260737 Length = 1015 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E+VR LN++ Sbjct: 996 EKVRALNKL 1004>XP_005260736 Length = 1033 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E+VR LN++ Sbjct: 1014 EKVRALNKL 1022>XP_006723616 Length = 1223 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E+VR LN++ Sbjct: 1204 EKVRALNKL 1212>XP_006723615 Length = 1382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E+VR LN++ Sbjct: 1363 EKVRALNKL 1371>XP_005260735 Length = 1398 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERVRLLNRV 9 E+VR LN++ Sbjct: 1379 EKVRALNKL 1387>XP_005270080 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RVRLLN 7 RVRLLN Sbjct: 142 RVRLLN 147>NP_055107 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ERVRLLNR 8 E VR++NR Sbjct: 155 ETVRIINR 162Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.149 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 363,537 Number of extensions: 631 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |