Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004251 18 1135 NP_001093320 17 4312 NP_001093260 17 4312 NP_001094101 17 4312 NP_001161337 17 4312 NP_060085 17 4312 NP_001003845 17 4312 NP_001008395 17 4312 XP_005269987 17 4312 XP_005269986 17 4312 XP_005269985 17 4312 XP_005246599 17 4312 NP_689704 16 5631 NP_002262 16 5631 XP_005254110 16 5631 XP_005254109 16 5631 XP_005254106 16 5631 XP_006711241 16 5631 NP_001138820 16 7355 NP_079049 16 7355 NP_000377 16 7355 XP_006721155 16 7355 NP_001019832 15 9605 NP_001278309 15 9605 NP_056161 15 9605 NP_075390 15 9605 NP_079335 15 9605 XP_006726395 15 9605 XP_006725017 15 9605 XP_006720156 15 9605 XP_006715631 15 9605 XP_006711144 15 9605>NP_004251 Length = 1208 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ERIAALLQT 9 ERIAALL+T Sbjct: 714 ERIAALLRT 722>NP_001093320 Length = 479 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERIAALLQT 9 E++AA LQT Sbjct: 345 EKVAATLQT 353>NP_001093260 Length = 479 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERIAALLQT 9 E++AA LQT Sbjct: 345 EKVAATLQT 353>NP_001094101 Length = 481 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERIAALLQT 9 E++AA LQT Sbjct: 347 EKVAATLQT 355>NP_001161337 Length = 384 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ERIAALLQT 9 ERI LLQT Sbjct: 268 ERILGLLQT 276>NP_060085 Length = 385 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ERIAALLQT 9 ERI LLQT Sbjct: 268 ERILGLLQT 276>NP_001003845 Length = 398 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RIAALLQT 9 +IAALLQT Sbjct: 253 QIAALLQT 260>NP_001008395 Length = 333 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ERIAALLQT 9 ERI LLQT Sbjct: 222 ERILGLLQT 230>XP_005269987 Length = 226 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ERIAALLQT 9 ERI LLQT Sbjct: 109 ERILGLLQT 117>XP_005269986 Length = 226 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ERIAALLQT 9 ERI LLQT Sbjct: 109 ERILGLLQT 117>XP_005269985 Length = 316 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ERIAALLQT 9 ERI LLQT Sbjct: 268 ERILGLLQT 276>XP_005246599 Length = 442 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RIAALLQT 9 +IAALLQT Sbjct: 297 QIAALLQT 304>NP_689704 Length = 502 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ERIAALLQT 9 +RI+ALLQ+ Sbjct: 199 QRISALLQS 207>NP_002262 Length = 1115 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 IAALLQT 9 IAALLQT Sbjct: 461 IAALLQT 467>XP_005254110 Length = 1115 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 IAALLQT 9 IAALLQT Sbjct: 461 IAALLQT 467>XP_005254109 Length = 1115 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 IAALLQT 9 IAALLQT Sbjct: 461 IAALLQT 467>XP_005254106 Length = 1115 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 IAALLQT 9 IAALLQT Sbjct: 461 IAALLQT 467>XP_006711241 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ERIAALLQT 9 +RI+ALLQ+ Sbjct: 199 QRISALLQS 207>NP_001138820 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RIAALLQT 9 ++AA+LQT Sbjct: 178 KVAAILQT 185>NP_079049 Length = 416 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RIAALLQT 9 ++AA+LQT Sbjct: 140 KVAAILQT 147>NP_000377 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ERIAALLQ 8 E++AAL+Q Sbjct: 9 EKVAALIQ 16>XP_006721155 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RIAALLQT 9 ++AA+LQT Sbjct: 151 KVAAILQT 158>NP_001019832 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERIAALLQT 9 E+IAA L+T Sbjct: 345 EKIAASLET 353>NP_001278309 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERIAALLQT 9 E+IAA L+T Sbjct: 345 EKIAASLET 353>NP_056161 Length = 2539 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ERIAALL 7 ER+AALL Sbjct: 1208 ERLAALL 1214>NP_075390 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERIAALLQT 9 E+IAA L+T Sbjct: 345 EKIAASLET 353>NP_079335 Length = 715 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ERIAALLQ 8 E+IAALL+ Sbjct: 328 EKIAALLR 335>XP_006726395 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERIAALLQT 9 E++AA L+T Sbjct: 36 EKVAATLET 44>XP_006725017 Length = 229 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERIAALLQT 9 E+IAA L+T Sbjct: 100 EKIAASLET 108>XP_006720156 Length = 2497 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ERIAALL 7 ER+AALL Sbjct: 1208 ERLAALL 1214>XP_006715631 Length = 648 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ERIAALLQ 8 E+IAALL+ Sbjct: 328 EKIAALLR 335>XP_006711144 Length = 229 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERIAALLQT 9 E+IAA L+T Sbjct: 100 EKIAASLET 108Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.131 0.305 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 305,212 Number of extensions: 639 Number of successful extensions: 32 Number of sequences better than 10000.0: 32 Number of HSP's gapped: 32 Number of HSP's successfully gapped: 32 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |