Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000042                                                              20     509
XP_006718907                                                           20     509
XP_006718906                                                           20     509
XP_005271619                                                           20     509
XP_005271618                                                           20     509
NP_060773                                                              18    1135
XP_006715205                                                           18    1135
XP_006715204                                                           18    1135
NP_055506                                                              18    1935
NP_064502                                                              18    1935
NP_037506                                                              17    3301
NP_001155901                                                           17    3301
NP_001167522                                                           17    4312
NP_006021                                                              17    4312
NP_001278030                                                           17    4312
NP_001005505                                                           17    4312
NP_001032852                                                           17    4312
XP_005248564                                                           17    4312
XP_005265638                                                           17    4312
NP_005900                                                              17    4312
NP_001839                                                              16    7355
NP_005958                                                              16    7355
NP_001129666                                                           16    7355
NP_001129665                                                           16    7355
NP_001074961                                                           16    7355
NP_005957                                                              16    7355
NP_872313                                                              16    7355
NP_057450                                                              16    7355
XP_006724027                                                           16    7355
XP_005260809                                                           16    7355
XP_005260808                                                           16    7355
XP_005260807                                                           16    7355
XP_005268951                                                           16    7355
XP_005268733                                                           16    7355
XP_005268732                                                           16    7355
XP_005274103                                                           16    7355
XP_006714215                                                           16    7355
XP_006714214                                                           16    7355
XP_005262915                                                           16    7355
XP_005246644                                                           16    7355
XP_005246643                                                           16    7355
XP_005246642                                                           16    7355
XP_005246641                                                           16    7355
XP_005246640                                                           16    7355
XP_005246638                                                           16    7355
XP_005246639                                                           16    7355
XP_005246636                                                           16    7355
XP_005246637                                                           16    7355
XP_006712603                                                           16    7355
NP_055744                                                              16    7355
NP_055806                                                              16    7355
NP_001171853                                                           15    9605
NP_001096621                                                           15    9605
NP_001096620                                                           15    9605
NP_443158                                                              15    9605
>NP_000042
          Length = 3056

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   ENFIELMAD 9
           EN IELMAD
Sbjct: 343 ENLIELMAD 351
>XP_006718907
          Length = 3050

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   ENFIELMAD 9
           EN IELMAD
Sbjct: 343 ENLIELMAD 351
>XP_006718906
          Length = 3056

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   ENFIELMAD 9
           EN IELMAD
Sbjct: 343 ENLIELMAD 351
>XP_005271619
          Length = 3056

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   ENFIELMAD 9
           EN IELMAD
Sbjct: 343 ENLIELMAD 351
>XP_005271618
          Length = 3056

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   ENFIELMAD 9
           EN IELMAD
Sbjct: 343 ENLIELMAD 351
>NP_060773
          Length = 924

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   ENFIELMAD 9
           EN+IEL AD
Sbjct: 761 ENYIELKAD 769
>XP_006715205
          Length = 924

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   ENFIELMAD 9
           EN+IEL AD
Sbjct: 761 ENYIELKAD 769
>XP_006715204
          Length = 924

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   ENFIELMAD 9
           EN+IEL AD
Sbjct: 761 ENYIELKAD 769
>NP_055506
          Length = 1485

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   ENFIELMAD 9
           E FIELM D
Sbjct: 251 ERFIELMID 259
>NP_064502
          Length = 1176

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   NFIELMAD 9
           NF+E MAD
Sbjct: 754 NFVEAMAD 761
>NP_037506
          Length = 868

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   ENFIELMAD 9
           +NF+EL+A+
Sbjct: 661 DNFVELVAN 669
>NP_001155901
          Length = 873

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   ENFIELMAD 9
           +NF+EL+A+
Sbjct: 666 DNFVELVAN 674
>NP_001167522
          Length = 1150

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   ENFIELM 7
           +NFIELM
Sbjct: 706 KNFIELM 712
>NP_006021
          Length = 1143

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   ENFIELM 7
           +NFIELM
Sbjct: 699 KNFIELM 705
>NP_001278030
          Length = 1076

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   ENFIELM 7
           +NFIELM
Sbjct: 630 KNFIELM 636
>NP_001005505
          Length = 1145

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   ENFIELM 7
           +NFIELM
Sbjct: 699 KNFIELM 705
>NP_001032852
          Length = 1125

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   ENFIELMAD 9
           +NF++ MAD
Sbjct: 818 KNFVKTMAD 826
>XP_005248564
          Length = 2342

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  ENFIELMAD 9
          +NFIE+  D
Sbjct: 34 QNFIEIFTD 42
>XP_005265638
          Length = 1144

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   ENFIELM 7
           +NFIELM
Sbjct: 699 KNFIELM 705
>NP_005900
          Length = 2468

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   ENFIELMAD 9
           +NFIE+  D
Sbjct: 160 QNFIEIFTD 168
>NP_001839
          Length = 1028

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   ENFIELMAD 9
           EN+ EL+ D
Sbjct: 791 ENYAELLED 799
>NP_005958
          Length = 525

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  ENFIELMA 8
          E F+E+MA
Sbjct: 78 EEFLEIMA 85
>NP_001129666
          Length = 710

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   ENFIELMA 8
           E F+E+MA
Sbjct: 476 EQFVEVMA 483
>NP_001129665
          Length = 710

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   ENFIELMA 8
           E F+E+MA
Sbjct: 476 EQFVEVMA 483
>NP_001074961
          Length = 422

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   ENFIELM 7
           E+F+ELM
Sbjct: 210 ESFVELM 216
>NP_005957
          Length = 487

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  ENFIELMA 8
          E F+E+MA
Sbjct: 47 EEFLEIMA 54
>NP_872313
          Length = 452

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   ENFIELM 7
           E+F+ELM
Sbjct: 210 ESFVELM 216
>NP_057450
          Length = 220

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   ENFIELM 7
           E+F+ELM
Sbjct: 134 EDFVELM 140
>XP_006724027
          Length = 841

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   ENFIELMAD 9
           EN+ EL+ D
Sbjct: 791 ENYAELLED 799
>XP_005260809
          Length = 1832

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1    ENFIELM 7
            ENF ELM
Sbjct: 1244 ENFSELM 1250
>XP_005260808
          Length = 1872

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1    ENFIELM 7
            ENF ELM
Sbjct: 1284 ENFSELM 1290
>XP_005260807
          Length = 1883

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1    ENFIELM 7
            ENF ELM
Sbjct: 1295 ENFSELM 1301
>XP_005268951
          Length = 461

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  ENFIELMA 8
          E F+E+MA
Sbjct: 78 EEFLEIMA 85
>XP_005268733
          Length = 487

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   ENFIELM 7
           E+F+ELM
Sbjct: 245 ESFVELM 251
>XP_005268732
          Length = 550

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   ENFIELM 7
           E+F+ELM
Sbjct: 308 ESFVELM 314
>XP_005274103
          Length = 226

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   ENFIELM 7
           E+F+ELM
Sbjct: 140 EDFVELM 146
>XP_006714215
          Length = 3544

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    ENFIELMAD 9
            E+FIEL+ +
Sbjct: 1539 EHFIELLTE 1547
>XP_006714214
          Length = 3544

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    ENFIELMAD 9
            E+FIEL+ +
Sbjct: 1539 EHFIELLTE 1547
>XP_005262915
          Length = 3544

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    ENFIELMAD 9
            E+FIEL+ +
Sbjct: 1539 EHFIELLTE 1547
>XP_005246644
          Length = 457

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  ENFIELMA 8
          E F+E+MA
Sbjct: 47 EEFLEIMA 54
>XP_005246643
          Length = 486

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  ENFIELMA 8
          E F+E+MA
Sbjct: 47 EEFLEIMA 54
>XP_005246642
          Length = 487

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  ENFIELMA 8
          E F+E+MA
Sbjct: 47 EEFLEIMA 54
>XP_005246641
          Length = 487

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  ENFIELMA 8
          E F+E+MA
Sbjct: 47 EEFLEIMA 54
>XP_005246640
          Length = 487

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  ENFIELMA 8
          E F+E+MA
Sbjct: 47 EEFLEIMA 54
>XP_005246638
          Length = 487

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  ENFIELMA 8
          E F+E+MA
Sbjct: 47 EEFLEIMA 54
>XP_005246639
          Length = 487

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  ENFIELMA 8
          E F+E+MA
Sbjct: 47 EEFLEIMA 54
>XP_005246636
          Length = 487

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  ENFIELMA 8
          E F+E+MA
Sbjct: 47 EEFLEIMA 54
>XP_005246637
          Length = 487

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  ENFIELMA 8
          E F+E+MA
Sbjct: 47 EEFLEIMA 54
>XP_006712603
          Length = 487

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  ENFIELMA 8
          E F+E+MA
Sbjct: 47 EEFLEIMA 54
>NP_055744
          Length = 710

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   ENFIELMA 8
           E F+E+MA
Sbjct: 476 EQFVEVMA 483
>NP_055806
          Length = 3526

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    ENFIELMAD 9
            E+FIEL+ +
Sbjct: 1521 EHFIELLTE 1529
>NP_001171853
          Length = 448

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   NFIELM 7
           NF+ELM
Sbjct: 317 NFLELM 322
>NP_001096621
          Length = 448

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   NFIELM 7
           NF+ELM
Sbjct: 317 NFLELM 322
>NP_001096620
          Length = 448

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   NFIELM 7
           NF+ELM
Sbjct: 317 NFLELM 322
>NP_443158
          Length = 448

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   NFIELM 7
           NF+ELM
Sbjct: 317 NFLELM 322
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.321    0.139    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 428,329
Number of extensions: 957
Number of successful extensions: 55
Number of sequences better than 10000.0: 55
Number of HSP's gapped: 55
Number of HSP's successfully gapped: 55
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.8 bits)
S2: 28 (15.4 bits)

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