Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_361014 19 869 NP_001243998 19 869 NP_659473 16 5631 NP_001186094 16 5631 XP_005257183 16 5631 XP_005257182 16 5631 XP_006721806 16 5631 XP_006721805 16 5631 XP_006721804 16 5631 XP_005257179 16 5631 XP_006721803 16 5631 XP_005257176 16 5631 NP_714922 16 5631 NP_612433 16 7355 NP_659570 16 7355 XP_005251744 16 7355 XP_005251742 16 7355 XP_006717010 16 7355 XP_005251741 16 7355 XP_005251740 16 7355 XP_006715976 16 7355 XP_006715975 16 7355 NP_849150 16 7355 NP_055384 16 7355 NP_000278 15 9605 NP_002308 15 9605 NP_115690 15 9605 NP_694979 15 9605 NP_037491 15 9605 NP_079303 15 9605 NP_065166 15 9605 XP_006723895 15 9605 XP_005259334 15 9605 XP_005259333 15 9605 XP_005259263 15 9605 XP_006719702 15 9605 XP_005249715 15 9605 XP_005249714 15 9605 XP_006715730 15 9605 XP_005249237 15 9605 NP_001956 15 9605 NP_001035751 15 9605>NP_361014 Length = 707 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ELLSVGSQR 9 ELLSVGS+R Sbjct: 4 ELLSVGSKR 12>NP_001243998 Length = 176 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ELLSVGSQR 9 ELLSVGS+R Sbjct: 4 ELLSVGSKR 12>NP_659473 Length = 955 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLSVGSQR 9 EL++V SQR Sbjct: 736 ELINVNSQR 744>NP_001186094 Length = 955 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLSVGSQR 9 EL++V SQR Sbjct: 736 ELINVNSQR 744>XP_005257183 Length = 547 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLSVGSQR 9 EL++V SQR Sbjct: 328 ELINVNSQR 336>XP_005257182 Length = 648 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLSVGSQR 9 EL++V SQR Sbjct: 429 ELINVNSQR 437>XP_006721806 Length = 838 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLSVGSQR 9 EL++V SQR Sbjct: 737 ELINVNSQR 745>XP_006721805 Length = 874 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLSVGSQR 9 EL++V SQR Sbjct: 737 ELINVNSQR 745>XP_006721804 Length = 908 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLSVGSQR 9 EL++V SQR Sbjct: 689 ELINVNSQR 697>XP_005257179 Length = 913 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLSVGSQR 9 EL++V SQR Sbjct: 694 ELINVNSQR 702>XP_006721803 Length = 956 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLSVGSQR 9 EL++V SQR Sbjct: 737 ELINVNSQR 745>XP_005257176 Length = 956 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLSVGSQR 9 EL++V SQR Sbjct: 737 ELINVNSQR 745>NP_714922 Length = 309 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLSVGSQR 9 LL+VGS+R Sbjct: 25 LLTVGSER 32>NP_612433 Length = 513 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLSVGSQR 9 +LLS+GS R Sbjct: 35 DLLSLGSPR 43>NP_659570 Length = 839 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLSVGSQR 9 LLS GSQ+ Sbjct: 206 LLSTGSQK 213>XP_005251744 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLSVGSQR 9 +LLS+GS R Sbjct: 173 DLLSLGSPR 181>XP_005251742 Length = 542 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLSVGSQR 9 +LLS+GS R Sbjct: 173 DLLSLGSPR 181>XP_006717010 Length = 635 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLSVGSQR 9 +LLS+GS R Sbjct: 139 DLLSLGSPR 147>XP_005251741 Length = 651 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLSVGSQR 9 +LLS+GS R Sbjct: 173 DLLSLGSPR 181>XP_005251740 Length = 669 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLSVGSQR 9 +LLS+GS R Sbjct: 173 DLLSLGSPR 181>XP_006715976 Length = 839 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLSVGSQR 9 LLS GSQ+ Sbjct: 206 LLSTGSQK 213>XP_006715975 Length = 839 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLSVGSQR 9 LLS GSQ+ Sbjct: 206 LLSTGSQK 213>NP_849150 Length = 1445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ELLSVGSQ 8 ++LS+GSQ Sbjct: 1018 QVLSIGSQ 1025>NP_055384 Length = 839 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLSVGSQR 9 LLS GSQ+ Sbjct: 206 LLSTGSQK 213>NP_000278 Length = 980 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLSVGSQR 9 ELLS+G +R Sbjct: 729 ELLSLGLRR 737>NP_002308 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLSVGSQ 8 LLS+GSQ Sbjct: 57 LLSLGSQ 63>NP_115690 Length = 327 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ELLSVGSQR 9 E+L VG Q+ Sbjct: 175 EMLKVGKQK 183>NP_694979 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SVGSQR 9 SVGSQR Sbjct: 3 SVGSQR 8>NP_037491 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLSVGSQ 8 LLSVG+Q Sbjct: 66 LLSVGNQ 72>NP_079303 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLSVGSQ 8 LLSVG+Q Sbjct: 98 LLSVGNQ 104>NP_065166 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SVGSQR 9 SVGSQR Sbjct: 238 SVGSQR 243>XP_006723895 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SVGSQR 9 SVGSQR Sbjct: 238 SVGSQR 243>XP_005259334 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLSVGSQ 8 LLSVG+Q Sbjct: 8 LLSVGNQ 14>XP_005259333 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLSVGSQ 8 LLSVG+Q Sbjct: 98 LLSVGNQ 104>XP_005259263 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLSVGSQ 8 LLSVG+Q Sbjct: 66 LLSVGNQ 72>XP_006719702 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ELLSVGSQR 9 E+L VG Q+ Sbjct: 94 EMLKVGKQK 102>XP_005249715 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SVGSQR 9 SVGSQR Sbjct: 3 SVGSQR 8>XP_005249714 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SVGSQR 9 SVGSQR Sbjct: 3 SVGSQR 8>XP_006715730 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SVGSQR 9 SVGSQR Sbjct: 3 SVGSQR 8>XP_005249237 Length = 892 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLSVGSQR 9 ELLS+G +R Sbjct: 641 ELLSLGLRR 649>NP_001956 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ELLSVGS 7 ELLSVG+ Sbjct: 312 ELLSVGA 318>NP_001035751 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SVGSQR 9 SVGSQR Sbjct: 3 SVGSQR 8Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.127 0.304 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 466,777 Number of extensions: 743 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |