Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001137429 17 3301 NP_110411 17 3301 XP_006726657 17 3301 XP_006725285 17 3301 XP_006715633 17 3301 XP_006715632 17 3301 NP_055670 17 4312 NP_115758 16 5631 NP_543009 16 5631 NP_861525 16 5631 NP_001121685 16 5631 NP_001121684 16 5631 NP_001186623 16 5631 NP_001186622 16 5631 NP_001186621 16 5631 NP_001711 16 5631 NP_001161707 16 5631 NP_003031 16 5631 XP_006716157 16 5631 XP_005246413 16 5631 XP_005246412 16 5631 XP_005271206 16 5631 XP_006710679 16 5631 NP_689741 16 5631 NP_612355 16 7355 NP_055523 16 7355 NP_009098 16 7355 XP_006719769 16 7355 XP_005263588 16 7355 NP_060854 15 9605 NP_060237 15 9605 NP_570901 15 9605 NP_996985 15 9605 NP_001153401 15 9605 NP_653221 15 9605 NP_001243316 15 9605 NP_001243315 15 9605 NP_001243314 15 9605 NP_001186506 15 9605 NP_001003745 15 9605 XP_005276481 15 9605 XP_005260618 15 9605 XP_005269323 15 9605 XP_006716662 15 9605 XP_005270516 15 9605 XP_005275780 15 9605 NP_001118228 15 9605 NP_001004461 15 9605>NP_001137429 Length = 419 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLAVLEMP 9 LLAVL MP Sbjct: 129 LLAVLNMP 136>NP_110411 Length = 419 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLAVLEMP 9 LLAVL MP Sbjct: 129 LLAVLNMP 136>XP_006726657 Length = 633 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLAVLEMP 9 E+L +LEMP Sbjct: 318 EMLELLEMP 326>XP_006725285 Length = 633 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLAVLEMP 9 E+L +LEMP Sbjct: 318 EMLELLEMP 326>XP_006715633 Length = 419 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLAVLEMP 9 LLAVL MP Sbjct: 129 LLAVLNMP 136>XP_006715632 Length = 419 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLAVLEMP 9 LLAVL MP Sbjct: 129 LLAVLNMP 136>NP_055670 Length = 807 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLAVLEMP 9 ELL +L+MP Sbjct: 753 ELLTLLKMP 761>NP_115758 Length = 612 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELLAVLEMP 9 E+L +LE+P Sbjct: 151 EILEILEIP 159>NP_543009 Length = 363 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLAVLEMP 9 LLA L+MP Sbjct: 54 LLAALDMP 61>NP_861525 Length = 402 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLAVLEMP 9 E+LAVL +P Sbjct: 47 EILAVLGLP 55>NP_001121685 Length = 476 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELLAVLEMP 9 ++LAV+E P Sbjct: 87 QMLAVMEQP 95>NP_001121684 Length = 476 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELLAVLEMP 9 ++LAV+E P Sbjct: 87 QMLAVMEQP 95>NP_001186623 Length = 1227 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ELLAVLEMP 9 EL AVLE+P Sbjct: 528 ELDAVLEVP 536>NP_001186622 Length = 1232 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ELLAVLEMP 9 EL AVLE+P Sbjct: 533 ELDAVLEVP 541>NP_001186621 Length = 1241 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ELLAVLEMP 9 EL AVLE+P Sbjct: 542 ELDAVLEVP 550>NP_001711 Length = 402 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLAVLEMP 9 E+LAVL +P Sbjct: 47 EILAVLGLP 55>NP_001161707 Length = 2139 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLAVLEMP 9 L+AVLE P Sbjct: 1865 LMAVLEFP 1872>NP_003031 Length = 1241 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ELLAVLEMP 9 EL AVLE+P Sbjct: 542 ELDAVLEVP 550>XP_006716157 Length = 666 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ELLAVLEMP 9 EL AVLE+P Sbjct: 542 ELDAVLEVP 550>XP_005246413 Length = 384 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELLAVLEMP 9 ++LAV+E P Sbjct: 87 QMLAVMEQP 95>XP_005246412 Length = 429 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELLAVLEMP 9 ++LAV+E P Sbjct: 87 QMLAVMEQP 95>XP_005271206 Length = 231 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLAVLEMP 9 E+LAVL +P Sbjct: 47 EILAVLGLP 55>XP_006710679 Length = 278 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLAVLEMP 9 E+LAVL +P Sbjct: 47 EILAVLGLP 55>NP_689741 Length = 476 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELLAVLEMP 9 ++LAV+E P Sbjct: 87 QMLAVMEQP 95>NP_612355 Length = 634 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELLAVLEMP 9 E+L +L+MP Sbjct: 318 EMLELLDMP 326>NP_055523 Length = 2209 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLAVLEMP 9 L+AVLE P Sbjct: 2045 LIAVLECP 2052>NP_009098 Length = 1325 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ELLAVLEMP 9 ELL +EMP Sbjct: 941 ELLFCIEMP 949>XP_006719769 Length = 2209 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLAVLEMP 9 L+AVLE P Sbjct: 2045 LIAVLECP 2052>XP_005263588 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELLAVLEMP 9 E+L +L+MP Sbjct: 318 EMLELLDMP 326>NP_060854 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ELLAVLE 7 ELLAV+E Sbjct: 202 ELLAVIE 208>NP_060237 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLAVLEMP 9 LLA+LE P Sbjct: 101 LLALLESP 108>NP_570901 Length = 647 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLAVLEMP 9 LLA+LE P Sbjct: 126 LLALLESP 133>NP_996985 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ELLAVLEMP 9 + LAVL MP Sbjct: 179 DALAVLPMP 187>NP_001153401 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ELLAVLEMP 9 + LAVL MP Sbjct: 160 DALAVLPMP 168>NP_653221 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LAVLEMP 9 LAVL MP Sbjct: 193 LAVLNMP 199>NP_001243316 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LAVLEMP 9 LAVL MP Sbjct: 193 LAVLNMP 199>NP_001243315 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LAVLEMP 9 LAVL MP Sbjct: 193 LAVLNMP 199>NP_001243314 Length = 339 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LAVLEMP 9 LAVL MP Sbjct: 193 LAVLNMP 199>NP_001186506 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ELLAVLE 7 ELLAV+E Sbjct: 406 ELLAVIE 412>NP_001003745 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLAVLEMP 9 L A+L+MP Sbjct: 222 LFAILKMP 229>XP_005276481 Length = 160 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ELLAVLEMP 9 ELL +LE P Sbjct: 117 ELLHMLEFP 125>XP_005260618 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ELLAVLEMP 9 ELL +LE P Sbjct: 578 ELLLMLESP 586>XP_005269323 Length = 160 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ELLAVLEMP 9 ELL +LE P Sbjct: 117 ELLHMLEFP 125>XP_006716662 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLAVLEMP 9 LLA+LE P Sbjct: 126 LLALLESP 133>XP_005270516 Length = 339 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LAVLEMP 9 LAVL MP Sbjct: 193 LAVLNMP 199>XP_005275780 Length = 160 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ELLAVLEMP 9 ELL +LE P Sbjct: 117 ELLHMLEFP 125>NP_001118228 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ELLAVLEMP 9 ELL +LE P Sbjct: 578 ELLLMLESP 586>NP_001004461 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLAVLEMP 9 L A+L+MP Sbjct: 222 LFAILKMP 229Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.140 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 460,716 Number of extensions: 819 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |