Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 17 3301 XP_005271621 17 3301 XP_006718907 17 3301 XP_006718906 17 3301 XP_005271619 17 3301 XP_005271618 17 3301 NP_000799 17 4312 XP_006724874 17 4312 XP_005274716 17 4312 XP_005254225 17 4312 NP_689666 17 4312 NP_006138 16 5631 NP_001193625 16 5631 NP_001121697 16 5631 NP_689477 16 5631 XP_005253279 16 5631 XP_006718446 16 5631 XP_006718445 16 5631 XP_005253278 16 5631 XP_006718444 16 5631 NP_004786 16 7355 NP_006706 16 7355 NP_277053 16 7355 NP_001243424 16 7355 NP_001243425 16 7355 NP_001243423 16 7355 XP_006724633 16 7355 XP_005272755 16 7355 XP_006724632 16 7355 XP_005272754 16 7355 XP_005272753 16 7355 XP_005272752 16 7355 XP_005272751 16 7355 XP_006720571 16 7355 XP_005254441 16 7355 XP_006719958 16 7355 NP_060918 16 7355 NP_001245361 15 9605 NP_001245362 15 9605 NP_006087 15 9605 NP_001128714 15 9605>NP_000042 Length = 3056 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ILVNVLP 9 ILVN+LP Sbjct: 1290 ILVNILP 1296>XP_005271621 Length = 2708 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ILVNVLP 9 ILVN+LP Sbjct: 942 ILVNILP 948>XP_006718907 Length = 3050 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ILVNVLP 9 ILVN+LP Sbjct: 1284 ILVNILP 1290>XP_006718906 Length = 3056 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ILVNVLP 9 ILVN+LP Sbjct: 1290 ILVNILP 1296>XP_005271619 Length = 3056 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ILVNVLP 9 ILVN+LP Sbjct: 1290 ILVNILP 1296>XP_005271618 Length = 3056 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ILVNVLP 9 ILVN+LP Sbjct: 1290 ILVNILP 1296>NP_000799 Length = 492 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LILVNVLP 9 L L+N+LP Sbjct: 17 LFLINILP 24>XP_006724874 Length = 340 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LILVNVLP 9 L L+N+LP Sbjct: 17 LFLINILP 24>XP_005274716 Length = 491 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LILVNVLP 9 L L+N+LP Sbjct: 17 LFLINILP 24>XP_005254225 Length = 288 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ILVNVLP 9 +LVNVLP Sbjct: 253 LLVNVLP 259>NP_689666 Length = 288 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ILVNVLP 9 +LVNVLP Sbjct: 253 LLVNVLP 259>NP_006138 Length = 467 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELILVNVLP 9 +LILV V+P Sbjct: 388 KLILVQVIP 396>NP_001193625 Length = 372 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELILVNVLP 9 +LILV V+P Sbjct: 293 KLILVQVIP 301>NP_001121697 Length = 371 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LILVNVLP 9 + LVNVLP Sbjct: 331 IALVNVLP 338>NP_689477 Length = 364 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LILVNVLP 9 + LVNVLP Sbjct: 324 IALVNVLP 331>XP_005253279 Length = 328 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LILVNVLP 9 + LVNVLP Sbjct: 288 IALVNVLP 295>XP_006718446 Length = 343 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LILVNVLP 9 + LVNVLP Sbjct: 303 IALVNVLP 310>XP_006718445 Length = 364 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LILVNVLP 9 + LVNVLP Sbjct: 324 IALVNVLP 331>XP_005253278 Length = 364 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LILVNVLP 9 + LVNVLP Sbjct: 324 IALVNVLP 331>XP_006718444 Length = 379 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LILVNVLP 9 + LVNVLP Sbjct: 339 IALVNVLP 346>NP_004786 Length = 1012 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ELILVNVLP 9 EL+ VN+ P Sbjct: 625 ELVRVNITP 633>NP_006706 Length = 1040 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LILVNVLP 9 L++VN LP Sbjct: 624 LLIVNTLP 631>NP_277053 Length = 472 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LILVNVL 8 L+LVNVL Sbjct: 384 LVLVNVL 390>NP_001243424 Length = 1017 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LILVNVLP 9 L++VN LP Sbjct: 624 LLIVNTLP 631>NP_001243425 Length = 941 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LILVNVLP 9 L++VN LP Sbjct: 525 LLIVNTLP 532>NP_001243423 Length = 1057 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LILVNVLP 9 L++VN LP Sbjct: 624 LLIVNTLP 631>XP_006724633 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LILVNVL 8 L+LVNVL Sbjct: 333 LVLVNVL 339>XP_005272755 Length = 492 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LILVNVL 8 L+LVNVL Sbjct: 384 LVLVNVL 390>XP_006724632 Length = 492 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LILVNVL 8 L+LVNVL Sbjct: 384 LVLVNVL 390>XP_005272754 Length = 498 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LILVNVL 8 L+LVNVL Sbjct: 390 LVLVNVL 396>XP_005272753 Length = 519 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LILVNVL 8 L+LVNVL Sbjct: 431 LVLVNVL 437>XP_005272752 Length = 519 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LILVNVL 8 L+LVNVL Sbjct: 431 LVLVNVL 437>XP_005272751 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LILVNVL 8 L+LVNVL Sbjct: 431 LVLVNVL 437>XP_006720571 Length = 949 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LILVNVLP 9 L++VN LP Sbjct: 525 LLIVNTLP 532>XP_005254441 Length = 1048 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LILVNVLP 9 L++VN LP Sbjct: 624 LLIVNTLP 631>XP_006719958 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ELILVNVLP 9 EL+ VN+ P Sbjct: 318 ELVRVNITP 326>NP_060918 Length = 1230 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LVNVLP 9 LVNVLP Sbjct: 461 LVNVLP 466>NP_001245361 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LILVNVLP 9 L+L+NV P Sbjct: 94 LVLINVNP 101>NP_001245362 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LILVNVLP 9 L+L+NV P Sbjct: 79 LVLINVNP 86>NP_006087 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LILVNVLP 9 L+L+NV P Sbjct: 160 LVLINVNP 167>NP_001128714 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LILVNVLP 9 L+L+NV P Sbjct: 160 LVLINVNP 167Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.154 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 439,955 Number of extensions: 951 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |