Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 19 665 NP_000170 19 665 NP_001268422 19 665 NP_001268423 19 665 XP_005264328 19 665 NP_001367 18 1935 NP_001269607 17 4312 NP_001269606 17 4312 NP_000457 17 4312 XP_005250486 17 4312 NP_001933 16 5631 NP_078934 16 7355 NP_064703 16 7355 NP_065815 16 7355 XP_005255515 16 7355 XP_006716382 16 7355 XP_005247707 16 7355 XP_005247706 16 7355 XP_005247705 16 7355 XP_005247704 16 7355 XP_006713773 16 7355 NP_996809 15 9605 NP_065184 15 9605 NP_001005610 15 9605 NP_001005613 15 9605 NP_037506 15 9605 NP_001155901 15 9605 NP_001243121 15 9605 NP_001005609 15 9605 NP_001005612 15 9605 NP_001390 15 9605 NP_005345 15 9605 NP_006827 15 9605 NP_001711 15 9605 NP_848552 15 9605 XP_006724693 15 9605 XP_005260332 15 9605 XP_005260331 15 9605 XP_005260330 15 9605 XP_006723761 15 9605 XP_005260329 15 9605 XP_005271206 15 9605>NP_001268421 Length = 1230 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ELALSSLGG 9 ELALS+LGG Sbjct: 548 ELALSALGG 556>NP_000170 Length = 1360 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ELALSSLGG 9 ELALS+LGG Sbjct: 678 ELALSALGG 686>NP_001268422 Length = 1058 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ELALSSLGG 9 ELALS+LGG Sbjct: 376 ELALSALGG 384>NP_001268423 Length = 1058 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ELALSSLGG 9 ELALS+LGG Sbjct: 376 ELALSALGG 384>XP_005264328 Length = 1261 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ELALSSLGG 9 ELALS+LGG Sbjct: 579 ELALSALGG 587>NP_001367 Length = 4646 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ELALSSLGG 9 E ALSS+GG Sbjct: 1763 ETALSSMGG 1771>NP_001269607 Length = 1075 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LALSSLGG 9 L LSSLGG Sbjct: 343 LKLSSLGG 350>NP_001269606 Length = 1226 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LALSSLGG 9 L LSSLGG Sbjct: 551 LKLSSLGG 558>NP_000457 Length = 1283 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LALSSLGG 9 L LSSLGG Sbjct: 551 LKLSSLGG 558>XP_005250486 Length = 1243 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LALSSLGG 9 L LSSLGG Sbjct: 511 LKLSSLGG 518>NP_001933 Length = 1049 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LALSSLGG 9 + LSSLGG Sbjct: 1001 IGLSSLGG 1008>NP_078934 Length = 1081 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ELALSSLG 8 ELA+S+LG Sbjct: 498 ELAVSALG 505>NP_064703 Length = 526 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALSSLGG 9 ALS+LGG Sbjct: 327 ALSTLGG 333>NP_065815 Length = 1431 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LALSSLGG 9 L LSS+GG Sbjct: 1008 LELSSIGG 1015>XP_005255515 Length = 1360 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LALSSLGG 9 L LSS+GG Sbjct: 937 LELSSIGG 944>XP_006716382 Length = 571 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LALSSLGG 9 + LSSLGG Sbjct: 40 VCLSSLGG 47>XP_005247707 Length = 299 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALSSLGG 9 ALS+LGG Sbjct: 100 ALSTLGG 106>XP_005247706 Length = 320 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALSSLGG 9 ALS+LGG Sbjct: 121 ALSTLGG 127>XP_005247705 Length = 371 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALSSLGG 9 ALS+LGG Sbjct: 172 ALSTLGG 178>XP_005247704 Length = 428 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALSSLGG 9 ALS+LGG Sbjct: 327 ALSTLGG 333>XP_006713773 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALSSLGG 9 ALS+LGG Sbjct: 327 ALSTLGG 333>NP_996809 Length = 556 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ELALSSLG 8 ELAL +LG Sbjct: 62 ELALKTLG 69>NP_065184 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ELALSSLG 8 ELAL +LG Sbjct: 62 ELALKTLG 69>NP_001005610 Length = 135 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LSSLGG 9 LSSLGG Sbjct: 90 LSSLGG 95>NP_001005613 Length = 148 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LSSLGG 9 LSSLGG Sbjct: 90 LSSLGG 95>NP_037506 Length = 868 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ELALSSLG 8 +LAL+SLG Sbjct: 110 KLALASLG 117>NP_001155901 Length = 873 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ELALSSLG 8 +LAL+SLG Sbjct: 110 KLALASLG 117>NP_001243121 Length = 271 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ELALSSLG 8 +LAL+SLG Sbjct: 110 KLALASLG 117>NP_001005609 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LSSLGG 9 LSSLGG Sbjct: 90 LSSLGG 95>NP_001005612 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LSSLGG 9 LSSLGG Sbjct: 90 LSSLGG 95>NP_001390 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LSSLGG 9 LSSLGG Sbjct: 90 LSSLGG 95>NP_005345 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ALSSLGG 9 ALS LGG Sbjct: 10 ALSGLGG 16>NP_006827 Length = 2671 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LSSLGG 9 LSSLGG Sbjct: 592 LSSLGG 597>NP_001711 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LALSSLGG 9 LAL +LGG Sbjct: 13 LALCALGG 20>NP_848552 Length = 1677 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ELALSSLGG 9 ELALSS G Sbjct: 1149 ELALSSHSG 1157>XP_006724693 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LSSLGG 9 LSSLGG Sbjct: 90 LSSLGG 95>XP_005260332 Length = 1256 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ELALSSLGG 9 ELALSS G Sbjct: 1149 ELALSSHSG 1157>XP_005260331 Length = 1677 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ELALSSLGG 9 ELALSS G Sbjct: 1149 ELALSSHSG 1157>XP_005260330 Length = 1677 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ELALSSLGG 9 ELALSS G Sbjct: 1149 ELALSSHSG 1157>XP_006723761 Length = 1677 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ELALSSLGG 9 ELALSS G Sbjct: 1149 ELALSSHSG 1157>XP_005260329 Length = 1677 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ELALSSLGG 9 ELALSS G Sbjct: 1149 ELALSSHSG 1157>XP_005271206 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LALSSLGG 9 LAL +LGG Sbjct: 13 LALCALGG 20Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.131 0.326 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 348,485 Number of extensions: 590 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |