Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1482 NP_671714 18 1482 XP_006715890 18 1482 XP_005250160 18 1482 XP_005250159 18 1482 NP_071909 17 4312 NP_001032722 17 4312 NP_002798 17 4312 NP_001177966 17 4312 XP_006714734 17 4312 NP_996999 16 5631 NP_996994 16 5631 XP_006715811 16 5631 XP_005249842 16 5631 NP_057228 16 7355 NP_001073936 16 7355 NP_004095 15 9605 NP_001122074 15 9605 NP_005730 15 9605 NP_996555 15 9605 NP_001241649 15 9605 NP_001241647 15 9605 NP_001241650 15 9605 NP_001241652 15 9605 NP_002456 15 9605 NP_001241651 15 9605 NP_996557 15 9605 NP_001241648 15 9605 NP_996556 15 9605 NP_003562 15 9605 XP_005254171 15 9605 XP_006719474 15 9605 XP_005268933 15 9605 XP_006719473 15 9605 XP_006719472 15 9605 XP_006719471 15 9605 XP_006719470 15 9605 XP_006719469 15 9605 XP_006719468 15 9605>NP_005742 Length = 3907 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EEKVAAAFV 9 EEKVAAA V Sbjct: 2548 EEKVAAALV 2556>NP_671714 Length = 3899 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EEKVAAAFV 9 EEKVAAA V Sbjct: 2540 EEKVAAALV 2548>XP_006715890 Length = 3860 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EEKVAAAFV 9 EEKVAAA V Sbjct: 2501 EEKVAAALV 2509>XP_005250160 Length = 3939 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EEKVAAAFV 9 EEKVAAA V Sbjct: 2580 EEKVAAALV 2588>XP_005250159 Length = 3952 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EEKVAAAFV 9 EEKVAAA V Sbjct: 2593 EEKVAAALV 2601>NP_071909 Length = 461 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EEKVAAAF 8 EEK+AA F Sbjct: 200 EEKIAALF 207>NP_001032722 Length = 461 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EEKVAAAF 8 EEK+AA F Sbjct: 200 EEKIAALF 207>NP_002798 Length = 953 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EEKVAAAFV 9 EEK ++AFV Sbjct: 300 EEKTSSAFV 308>NP_001177966 Length = 922 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EEKVAAAFV 9 EEK ++AFV Sbjct: 300 EEKTSSAFV 308>XP_006714734 Length = 471 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EEKVAAAF 8 EEK+AA F Sbjct: 210 EEKIAALF 217>NP_996999 Length = 866 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EEKVAAAF 8 EE+VAAA+ Sbjct: 591 EEEVAAAY 598>NP_996994 Length = 923 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EEKVAAAF 8 EE+VAAA+ Sbjct: 648 EEEVAAAY 655>XP_006715811 Length = 488 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EEKVAAAF 8 EE+VAAA+ Sbjct: 213 EEEVAAAY 220>XP_005249842 Length = 923 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EEKVAAAF 8 EE+VAAA+ Sbjct: 648 EEEVAAAY 655>NP_057228 Length = 202 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EEKVAAAF 8 EEK+ AAF Sbjct: 54 EEKLQAAF 61>NP_001073936 Length = 1848 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EEKVAAAFV 9 EE+V AF+ Sbjct: 1786 EERVTVAFI 1794>NP_004095 Length = 2511 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EEKVAAA 7 EE+VAAA Sbjct: 2394 EERVAAA 2400>NP_001122074 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EKVAAAF 8 EK+AA+F Sbjct: 461 EKIAASF 467>NP_005730 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EKVAAAF 8 EK+AA+F Sbjct: 496 EKIAASF 502>NP_996555 Length = 1148 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EEKVAAAF 8 EEK +AAF Sbjct: 272 EEKKSAAF 279>NP_001241649 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EEKVAAAF 8 EEK +AAF Sbjct: 235 EEKKSAAF 242>NP_001241647 Length = 1173 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EEKVAAAF 8 EEK +AAF Sbjct: 247 EEKKSAAF 254>NP_001241650 Length = 1127 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EEKVAAAF 8 EEK +AAF Sbjct: 228 EEKKSAAF 235>NP_001241652 Length = 1139 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EEKVAAAF 8 EEK +AAF Sbjct: 234 EEKKSAAF 241>NP_002456 Length = 1171 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EEKVAAAF 8 EEK +AAF Sbjct: 272 EEKKSAAF 279>NP_001241651 Length = 1120 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EEKVAAAF 8 EEK +AAF Sbjct: 221 EEKKSAAF 228>NP_996557 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EEKVAAAF 8 EEK +AAF Sbjct: 247 EEKKSAAF 254>NP_001241648 Length = 1146 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EEKVAAAF 8 EEK +AAF Sbjct: 247 EEKKSAAF 254>NP_996556 Length = 1141 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EEKVAAAF 8 EEK +AAF Sbjct: 247 EEKKSAAF 254>NP_003562 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EEKVAAA 7 EEK+AAA Sbjct: 310 EEKLAAA 316>XP_005254171 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EKVAAAF 8 EK+AA+F Sbjct: 496 EKIAASF 502>XP_006719474 Length = 1164 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EEKVAAAF 8 EEK +AAF Sbjct: 247 EEKKSAAF 254>XP_005268933 Length = 1165 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EEKVAAAF 8 EEK +AAF Sbjct: 260 EEKKSAAF 267>XP_006719473 Length = 1166 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EEKVAAAF 8 EEK +AAF Sbjct: 272 EEKKSAAF 279>XP_006719472 Length = 1170 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EEKVAAAF 8 EEK +AAF Sbjct: 247 EEKKSAAF 254>XP_006719471 Length = 1177 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EEKVAAAF 8 EEK +AAF Sbjct: 272 EEKKSAAF 279>XP_006719470 Length = 1183 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EEKVAAAF 8 EEK +AAF Sbjct: 260 EEKKSAAF 267>XP_006719469 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EEKVAAAF 8 EEK +AAF Sbjct: 272 EEKKSAAF 279>XP_006719468 Length = 1195 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EEKVAAAF 8 EEK +AAF Sbjct: 272 EEKKSAAF 279Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.122 0.288 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 475,791 Number of extensions: 825 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |