Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 19 665 XP_005266703 19 665 NP_002948 17 4312 NP_000611 17 4312 NP_001191147 17 4312 NP_001191142 17 4312 NP_001191143 17 4312 NP_001124387 17 4312 NP_872380 17 4312 NP_817123 17 4312 XP_005258847 17 4312 XP_006723223 17 4312 XP_006719491 17 4312 XP_006719490 17 4312 XP_006719489 17 4312 XP_006717295 17 4312 XP_005263466 17 4312 NP_001127925 17 4312 NP_079052 16 5631 NP_940863 16 5631 XP_005254732 16 5631 XP_005254731 16 5631 XP_006720754 16 5631 XP_005254729 16 5631 XP_005254730 16 5631 XP_005254728 16 5631 XP_005254727 16 5631 NP_001263200 16 7355 NP_056093 16 7355 NP_001269807 16 7355 NP_001263201 16 7355 NP_003916 16 7355 NP_001263199 16 7355 NP_705618 16 7355 NP_631898 16 7355 NP_004289 16 7355 NP_079414 16 7355 NP_001265241 16 7355 XP_005259731 16 7355 XP_005259730 16 7355 XP_005266602 16 7355 XP_005266932 16 7355 XP_006715469 16 7355 XP_005266931 16 7355 XP_006711461 16 7355 XP_006711460 16 7355 NP_060243 16 7355 NP_001129662 16 7355 NP_443192 16 7355 NP_001269221 15 9605 NP_009119 15 9605 NP_001269220 15 9605 NP_001269222 15 9605 NP_997297 15 9605 XP_006712513 15 9605 XP_006712511 15 9605 XP_006712509 15 9605 XP_005246533 15 9605 XP_006712508 15 9605 NP_115893 15 9605>NP_443179 Length = 2170 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EDSQGLSNV 9 EDSQ LSNV Sbjct: 1203 EDSQALSNV 1211>XP_005266703 Length = 1501 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EDSQGLSNV 9 EDSQ LSNV Sbjct: 534 EDSQALSNV 542>NP_002948 Length = 462 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DSQGLSN 8 DS+GLSN Sbjct: 379 DSKGLSN 385>NP_000611 Length = 1434 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EDSQGLSNV 9 E +QGLSNV Sbjct: 984 ELTQGLSNV 992>NP_001191147 Length = 1468 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EDSQGLSNV 9 E +QGLSNV Sbjct: 1018 ELTQGLSNV 1026>NP_001191142 Length = 1098 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EDSQGLSNV 9 E +QGLSNV Sbjct: 648 ELTQGLSNV 656>NP_001191143 Length = 1098 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EDSQGLSNV 9 E +QGLSNV Sbjct: 648 ELTQGLSNV 656>NP_001124387 Length = 415 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DSQGLSNV 9 DS+GLS+V Sbjct: 343 DSEGLSSV 350>NP_872380 Length = 312 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DSQGLSNV 9 DS+GLS+V Sbjct: 240 DSEGLSSV 247>NP_817123 Length = 1040 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EDSQGLSNV 9 ED G+SNV Sbjct: 618 EDQAGVSNV 626>XP_005258847 Length = 247 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DSQGLSNV 9 DS+GLS+V Sbjct: 175 DSEGLSSV 182>XP_006723223 Length = 465 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DSQGLSNV 9 DS+GLS+V Sbjct: 393 DSEGLSSV 400>XP_006719491 Length = 1434 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EDSQGLSNV 9 E +QGLSNV Sbjct: 984 ELTQGLSNV 992>XP_006719490 Length = 1468 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EDSQGLSNV 9 E +QGLSNV Sbjct: 1018 ELTQGLSNV 1026>XP_006719489 Length = 1468 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EDSQGLSNV 9 E +QGLSNV Sbjct: 1018 ELTQGLSNV 1026>XP_006717295 Length = 365 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DSQGLSN 8 DS+GLSN Sbjct: 282 DSKGLSN 288>XP_005263466 Length = 435 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DSQGLSN 8 DS+GLSN Sbjct: 352 DSKGLSN 358>NP_001127925 Length = 1059 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EDSQGLSNV 9 ED G+SNV Sbjct: 618 EDQAGVSNV 626>NP_079052 Length = 1746 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDSQGLSNV 9 ED +G+S+V Sbjct: 121 EDDEGISHV 129>NP_940863 Length = 754 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EDSQGLS 7 E+SQGLS Sbjct: 435 EESQGLS 441>XP_005254732 Length = 1746 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDSQGLSNV 9 ED +G+S+V Sbjct: 121 EDDEGISHV 129>XP_005254731 Length = 1746 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDSQGLSNV 9 ED +G+S+V Sbjct: 121 EDDEGISHV 129>XP_006720754 Length = 1746 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDSQGLSNV 9 ED +G+S+V Sbjct: 121 EDDEGISHV 129>XP_005254729 Length = 1746 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDSQGLSNV 9 ED +G+S+V Sbjct: 121 EDDEGISHV 129>XP_005254730 Length = 1746 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDSQGLSNV 9 ED +G+S+V Sbjct: 121 EDDEGISHV 129>XP_005254728 Length = 1746 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDSQGLSNV 9 ED +G+S+V Sbjct: 121 EDDEGISHV 129>XP_005254727 Length = 1746 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDSQGLSNV 9 ED +G+S+V Sbjct: 121 EDDEGISHV 129>NP_001263200 Length = 572 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EDSQGLSN 8 ++S+GLSN Sbjct: 199 QESRGLSN 206>NP_056093 Length = 1247 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DSQGLS 7 DSQGLS Sbjct: 713 DSQGLS 718>NP_001269807 Length = 322 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EDSQGLSN 8 EDS LSN Sbjct: 174 EDSDSLSN 181>NP_001263201 Length = 540 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EDSQGLSN 8 ++S+GLSN Sbjct: 199 QESRGLSN 206>NP_003916 Length = 580 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EDSQGLSN 8 ++S+GLSN Sbjct: 199 QESRGLSN 206>NP_001263199 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EDSQGLSN 8 ++S+GLSN Sbjct: 199 QESRGLSN 206>NP_705618 Length = 1391 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EDSQGLSNV 9 +D QG+S V Sbjct: 307 QDGQGMSRV 315>NP_631898 Length = 892 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QGLSNV 9 QGLSNV Sbjct: 256 QGLSNV 261>NP_004289 Length = 1332 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EDSQGLSNV 9 +D QG+S V Sbjct: 248 QDGQGMSRV 256>NP_079414 Length = 944 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SQGLSN 8 SQGLSN Sbjct: 440 SQGLSN 445>NP_001265241 Length = 1327 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EDSQGLSNV 9 +D QG+S V Sbjct: 307 QDGQGMSRV 315>XP_005259731 Length = 811 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QGLSNV 9 QGLSNV Sbjct: 256 QGLSNV 261>XP_005259730 Length = 892 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QGLSNV 9 QGLSNV Sbjct: 256 QGLSNV 261>XP_005266602 Length = 922 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SQGLSN 8 SQGLSN Sbjct: 418 SQGLSN 423>XP_005266932 Length = 1008 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DSQGLS 7 DSQGLS Sbjct: 474 DSQGLS 479>XP_006715469 Length = 1235 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DSQGLS 7 DSQGLS Sbjct: 701 DSQGLS 706>XP_005266931 Length = 1283 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DSQGLS 7 DSQGLS Sbjct: 749 DSQGLS 754>XP_006711461 Length = 398 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EDSQGLSN 8 EDS LSN Sbjct: 250 EDSDSLSN 257>XP_006711460 Length = 398 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EDSQGLSN 8 EDS LSN Sbjct: 250 EDSDSLSN 257>NP_060243 Length = 398 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EDSQGLSN 8 EDS LSN Sbjct: 250 EDSDSLSN 257>NP_001129662 Length = 382 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EDSQGLSN 8 EDS LSN Sbjct: 234 EDSDSLSN 241>NP_443192 Length = 134 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EDSQGLSN 8 ED++GL N Sbjct: 73 EDNRGLDN 80>NP_001269221 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QGLSNV 9 QGLSN+ Sbjct: 362 QGLSNI 367>NP_009119 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QGLSNV 9 QGLSN+ Sbjct: 362 QGLSNI 367>NP_001269220 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QGLSNV 9 QGLSN+ Sbjct: 379 QGLSNI 384>NP_001269222 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QGLSNV 9 QGLSN+ Sbjct: 274 QGLSNI 279>NP_997297 Length = 1318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QGLSNV 9 QGLSN+ Sbjct: 1063 QGLSNI 1068>XP_006712513 Length = 3220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EDSQGLS 7 +DSQGL+ Sbjct: 2988 DDSQGLA 2994>XP_006712511 Length = 3256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EDSQGLS 7 +DSQGL+ Sbjct: 3024 DDSQGLA 3030>XP_006712509 Length = 3319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EDSQGLS 7 +DSQGL+ Sbjct: 3087 DDSQGLA 3093>XP_005246533 Length = 3323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EDSQGLS 7 +DSQGL+ Sbjct: 3091 DDSQGLA 3097>XP_006712508 Length = 3324 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EDSQGLS 7 +DSQGL+ Sbjct: 3092 DDSQGLA 3098>NP_115893 Length = 3258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EDSQGLS 7 +DSQGL+ Sbjct: 3026 DDSQGLA 3032Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.290 0.116 0.284 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 654,077 Number of extensions: 1013 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |