Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 21 229 XP_005271621 21 229 XP_006718907 21 229 XP_006718906 21 229 XP_005271619 21 229 XP_005271618 21 229 NP_775321 17 4312 NP_001106649 17 4312 NP_619728 17 4312 NP_006590 17 4312 NP_619727 17 4312 NP_775322 17 4312 XP_005255834 17 4312 XP_006721188 17 4312 NP_075043 16 5631 NP_689718 16 5631 XP_006724036 16 5631 XP_006724035 16 5631 XP_006724034 16 5631 XP_006724033 16 5631 XP_006724032 16 5631 XP_006724031 16 5631 XP_005260983 16 5631 XP_006724030 16 5631 NP_001139669 16 5631 NP_001139150 16 7355 NP_775936 16 7355 NP_653252 16 7355 NP_001258758 16 7355 XP_006716776 16 7355 XP_006716483 16 7355 XP_005251224 16 7355 XP_006714651 16 7355 NP_001007098 15 9605 NP_001018075 15 9605 NP_006171 15 9605 NP_001018074 15 9605 NP_001018076 15 9605 NP_665809 15 9605 NP_114148 15 9605 NP_061869 15 9605 NP_001136112 15 9605 NP_055521 15 9605 NP_004762 15 9605 NP_057444 15 9605 XP_006722063 15 9605 XP_006722062 15 9605 XP_006722061 15 9605 XP_006722060 15 9605 XP_005257605 15 9605 XP_005257604 15 9605 XP_006722059 15 9605 XP_005269298 15 9605 XP_005252064 15 9605 XP_005252063 15 9605 XP_006717183 15 9605 XP_005252061 15 9605 XP_005252060 15 9605 XP_005252058 15 9605 XP_005247302 15 9605>NP_000042 Length = 3056 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EDQSSMNVF 9 EDQSSMN+F Sbjct: 850 EDQSSMNLF 858>XP_005271621 Length = 2708 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EDQSSMNVF 9 EDQSSMN+F Sbjct: 502 EDQSSMNLF 510>XP_006718907 Length = 3050 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EDQSSMNVF 9 EDQSSMN+F Sbjct: 850 EDQSSMNLF 858>XP_006718906 Length = 3056 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EDQSSMNVF 9 EDQSSMN+F Sbjct: 850 EDQSSMNLF 858>XP_005271619 Length = 3056 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EDQSSMNVF 9 EDQSSMN+F Sbjct: 850 EDQSSMNLF 858>XP_005271618 Length = 3056 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EDQSSMNVF 9 EDQSSMN+F Sbjct: 850 EDQSSMNLF 858>NP_775321 Length = 1455 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EDQSSMNVF 9 +DQ S N+F Sbjct: 1057 QDQQSTNIF 1065>NP_001106649 Length = 1548 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EDQSSMNVF 9 +DQ S N+F Sbjct: 1150 QDQQSTNIF 1158>NP_619728 Length = 1455 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EDQSSMNVF 9 +DQ S N+F Sbjct: 1057 QDQQSTNIF 1065>NP_006590 Length = 1531 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EDQSSMNVF 9 +DQ S N+F Sbjct: 1133 QDQQSTNIF 1141>NP_619727 Length = 1549 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EDQSSMNVF 9 +DQ S N+F Sbjct: 1151 QDQQSTNIF 1159>NP_775322 Length = 1455 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EDQSSMNVF 9 +DQ S N+F Sbjct: 1057 QDQQSTNIF 1065>XP_005255834 Length = 1264 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EDQSSMNVF 9 +DQ S N+F Sbjct: 866 QDQQSTNIF 874>XP_006721188 Length = 1484 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EDQSSMNVF 9 +DQ S N+F Sbjct: 1086 QDQQSTNIF 1094>NP_075043 Length = 1241 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QSSMNVF 9 QSS+N+F Sbjct: 18 QSSLNIF 24>NP_689718 Length = 670 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 EDQSSMNVF 9 EDQ N+F Sbjct: 453 EDQEKKNIF 461>XP_006724036 Length = 540 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 EDQSSMNVF 9 EDQ N+F Sbjct: 323 EDQEKKNIF 331>XP_006724035 Length = 540 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 EDQSSMNVF 9 EDQ N+F Sbjct: 323 EDQEKKNIF 331>XP_006724034 Length = 624 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 EDQSSMNVF 9 EDQ N+F Sbjct: 407 EDQEKKNIF 415>XP_006724033 Length = 670 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 EDQSSMNVF 9 EDQ N+F Sbjct: 453 EDQEKKNIF 461>XP_006724032 Length = 670 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 EDQSSMNVF 9 EDQ N+F Sbjct: 453 EDQEKKNIF 461>XP_006724031 Length = 670 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 EDQSSMNVF 9 EDQ N+F Sbjct: 453 EDQEKKNIF 461>XP_005260983 Length = 670 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 EDQSSMNVF 9 EDQ N+F Sbjct: 453 EDQEKKNIF 461>XP_006724030 Length = 670 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 EDQSSMNVF 9 EDQ N+F Sbjct: 453 EDQEKKNIF 461>NP_001139669 Length = 7081 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EDQSSMNV 8 ED+S++NV Sbjct: 3842 EDESNLNV 3849>NP_001139150 Length = 1275 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EDQSSMNV 8 ED SSM+V Sbjct: 150 EDNSSMDV 157>NP_775936 Length = 324 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EDQSSMNV 8 ED SSM+V Sbjct: 150 EDNSSMDV 157>NP_653252 Length = 1463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EDQSSMNVF 9 ED + +NVF Sbjct: 277 EDDTRLNVF 285>NP_001258758 Length = 108 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EDQSSMNVF 9 ED+ S+N++ Sbjct: 43 EDRCSLNIY 51>XP_006716776 Length = 108 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EDQSSMNVF 9 ED+ S+N++ Sbjct: 43 EDRCSLNIY 51>XP_006716483 Length = 1367 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EDQSSMNVF 9 ED + +NVF Sbjct: 181 EDDTRLNVF 189>XP_005251224 Length = 1439 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EDQSSMNVF 9 ED + +NVF Sbjct: 253 EDDTRLNVF 261>XP_006714651 Length = 1280 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EDQSSMNV 8 ED SSM+V Sbjct: 150 EDNSSMDV 157>NP_001007098 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EDQSSMNV 8 EDQ S+N+ Sbjct: 274 EDQDSVNL 281>NP_001018075 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EDQSSMNV 8 EDQ S+N+ Sbjct: 274 EDQDSVNL 281>NP_006171 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EDQSSMNV 8 EDQ S+N+ Sbjct: 274 EDQDSVNL 281>NP_001018074 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EDQSSMNV 8 EDQ S+N+ Sbjct: 274 EDQDSVNL 281>NP_001018076 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EDQSSMNV 8 EDQ S+N+ Sbjct: 274 EDQDSVNL 281>NP_665809 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 EDQSSMN 7 ED+S MN Sbjct: 107 EDESGMN 113>NP_114148 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 EDQSSMN 7 ED+S MN Sbjct: 186 EDESGMN 192>NP_061869 Length = 1690 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 EDQSSMNVF 9 E QSS N F Sbjct: 1254 EQQSSPNTF 1262>NP_001136112 Length = 1726 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 EDQSSMNVF 9 E QSS N F Sbjct: 1251 EQQSSPNTF 1259>NP_055521 Length = 963 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDQSSMNVF 9 E+Q S+NV+ Sbjct: 102 EEQLSINVY 110>NP_004762 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DQSSMNV 8 DQ++MNV Sbjct: 88 DQTTMNV 94>NP_057444 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 EDQSSMNVF 9 ED+ NVF Sbjct: 222 EDEEERNVF 230>XP_006722063 Length = 1923 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 EDQSSMNVF 9 E QSS N F Sbjct: 1487 EQQSSPNTF 1495>XP_006722062 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 EDQSSMNVF 9 E QSS N F Sbjct: 1391 EQQSSPNTF 1399>XP_006722061 Length = 1913 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 EDQSSMNVF 9 E QSS N F Sbjct: 1490 EQQSSPNTF 1498>XP_006722060 Length = 1915 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 EDQSSMNVF 9 E QSS N F Sbjct: 1440 EQQSSPNTF 1448>XP_005257605 Length = 1926 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 EDQSSMNVF 9 E QSS N F Sbjct: 1490 EQQSSPNTF 1498>XP_005257604 Length = 1962 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 EDQSSMNVF 9 E QSS N F Sbjct: 1487 EQQSSPNTF 1495>XP_006722059 Length = 1965 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 EDQSSMNVF 9 E QSS N F Sbjct: 1490 EQQSSPNTF 1498>XP_005269298 Length = 981 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDQSSMNVF 9 E+Q S+NV+ Sbjct: 102 EEQLSINVY 110>XP_005252064 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EDQSSMNV 8 EDQ S+N+ Sbjct: 274 EDQDSVNL 281>XP_005252063 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EDQSSMNV 8 EDQ S+N+ Sbjct: 274 EDQDSVNL 281>XP_006717183 Length = 554 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EDQSSMNV 8 EDQ S+N+ Sbjct: 274 EDQDSVNL 281>XP_005252061 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EDQSSMNV 8 EDQ S+N+ Sbjct: 274 EDQDSVNL 281>XP_005252060 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EDQSSMNV 8 EDQ S+N+ Sbjct: 274 EDQDSVNL 281>XP_005252058 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EDQSSMNV 8 EDQ S+N+ Sbjct: 274 EDQDSVNL 281>XP_005247302 Length = 2248 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 EDQSSMNV 8 ED+++MN+ Sbjct: 736 EDKNNMNI 743Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.117 0.291 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 396,960 Number of extensions: 677 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |