Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 20 299 XP_005266703 20 299 XP_005265088 18 1135 NP_056281 18 1135 NP_056036 17 4312 XP_005261543 17 4312 XP_005261542 17 4312 XP_006717799 17 4312 XP_006717798 17 4312 NP_777592 17 4312 NP_060119 16 5631 NP_951058 16 5631 NP_006651 16 5631 NP_001242941 16 5631 NP_001139281 16 5631 NP_116115 16 5631 NP_005955 16 5631 NP_001070654 16 5631 NP_079005 16 5631 NP_001243024 16 5631 XP_006723449 16 5631 XP_005256710 16 5631 XP_005256709 16 5631 XP_005256708 16 5631 XP_005246972 16 5631 XP_006712867 16 5631 XP_005246971 16 5631 XP_006712866 16 5631 XP_005246970 16 5631 NP_065954 16 5631 NP_056481 16 7355 NP_115609 16 7355 NP_036551 16 7355 XP_006723838 16 7355 XP_005260450 16 7355 XP_006723837 16 7355 XP_006723836 16 7355 XP_006723835 16 7355 XP_005268184 16 7355 XP_005268183 16 7355 XP_006716233 16 7355 XP_006715523 16 7355 NP_443085 16 7355 NP_000892 15 9605 NP_001159576 15 9605 NP_064581 15 9605 NP_001244025 15 9605 NP_006183 15 9605 XP_006714285 15 9605 XP_005263071 15 9605>NP_443179 Length = 2170 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 EDLKYEQS 8 EDLKYEQS Sbjct: 735 EDLKYEQS 742>XP_005266703 Length = 1501 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 EDLKYEQS 8 EDLKYEQS Sbjct: 66 EDLKYEQS 73>XP_005265088 Length = 1694 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EDLKYEQS 8 ED+KYEQ+ Sbjct: 176 EDIKYEQA 183>NP_056281 Length = 1636 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EDLKYEQS 8 ED+KYEQ+ Sbjct: 108 EDIKYEQA 115>NP_056036 Length = 1577 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EDLKYEQSN 9 EDLK+ +SN Sbjct: 733 EDLKFCESN 741>XP_005261543 Length = 231 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DLKYEQSN 9 DLKYE S+ Sbjct: 199 DLKYETSS 206>XP_005261542 Length = 264 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DLKYEQSN 9 DLKYE S+ Sbjct: 232 DLKYETSS 239>XP_006717799 Length = 976 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EDLKYEQSN 9 EDLK+ +SN Sbjct: 733 EDLKFCESN 741>XP_006717798 Length = 1534 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EDLKYEQSN 9 EDLK+ +SN Sbjct: 733 EDLKFCESN 741>NP_777592 Length = 507 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DLKYEQSN 9 DLKYE S+ Sbjct: 475 DLKYETSS 482>NP_060119 Length = 875 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EDLKYEQSN 9 ++LKY++ N Sbjct: 660 QELKYDEKN 668>NP_951058 Length = 853 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EDLKYEQSN 9 ++LKY++ N Sbjct: 660 QELKYDEKN 668>NP_006651 Length = 633 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDLKYEQSN 9 +D+K E+SN Sbjct: 280 DDIKLEKSN 288>NP_001242941 Length = 2007 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EDLKYEQSN 9 E+L+ EQSN Sbjct: 1774 EELEEEQSN 1782>NP_001139281 Length = 2036 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EDLKYEQSN 9 E+L+ EQSN Sbjct: 1801 EELEEEQSN 1809>NP_116115 Length = 762 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EDLKYEQ 7 EDL+YE+ Sbjct: 441 EDLEYEE 447>NP_005955 Length = 1976 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EDLKYEQSN 9 E+L+ EQSN Sbjct: 1743 EELEEEQSN 1751>NP_001070654 Length = 2003 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EDLKYEQSN 9 E+L+ EQSN Sbjct: 1768 EELEEEQSN 1776>NP_079005 Length = 1995 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EDLKYEQSN 9 E+L+ EQSN Sbjct: 1760 EELEEEQSN 1768>NP_001243024 Length = 1985 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EDLKYEQSN 9 E+L+ EQSN Sbjct: 1752 EELEEEQSN 1760>XP_006723449 Length = 2003 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EDLKYEQSN 9 E+L+ EQSN Sbjct: 1768 EELEEEQSN 1776>XP_005256710 Length = 1986 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EDLKYEQSN 9 E+L+ EQSN Sbjct: 1753 EELEEEQSN 1761>XP_005256709 Length = 1997 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EDLKYEQSN 9 E+L+ EQSN Sbjct: 1764 EELEEEQSN 1772>XP_005256708 Length = 2007 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EDLKYEQSN 9 E+L+ EQSN Sbjct: 1774 EELEEEQSN 1782>XP_005246972 Length = 494 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EDLKYEQ 7 EDL+YE+ Sbjct: 441 EDLEYEE 447>XP_006712867 Length = 643 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EDLKYEQ 7 EDL+YE+ Sbjct: 296 EDLEYEE 302>XP_005246971 Length = 785 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EDLKYEQ 7 EDL+YE+ Sbjct: 438 EDLEYEE 444>XP_006712866 Length = 788 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EDLKYEQ 7 EDL+YE+ Sbjct: 441 EDLEYEE 447>XP_005246970 Length = 788 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EDLKYEQ 7 EDL+YE+ Sbjct: 441 EDLEYEE 447>NP_065954 Length = 922 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EDLKYEQSN 9 + LKY QSN Sbjct: 198 DSLKYIQSN 206>NP_056481 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EDLKYE 6 +DLKYE Sbjct: 322 DDLKYE 327>NP_115609 Length = 594 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KYEQSN 9 KYE+SN Sbjct: 501 KYEESN 506>NP_036551 Length = 210 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EDLKYEQS 8 EDLK EQ+ Sbjct: 118 EDLKKEQN 125>XP_006723838 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EDLKYE 6 +DLKYE Sbjct: 322 DDLKYE 327>XP_005260450 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EDLKYE 6 +DLKYE Sbjct: 322 DDLKYE 327>XP_006723837 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EDLKYE 6 +DLKYE Sbjct: 338 DDLKYE 343>XP_006723836 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EDLKYE 6 +DLKYE Sbjct: 350 DDLKYE 355>XP_006723835 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EDLKYE 6 +DLKYE Sbjct: 350 DDLKYE 355>XP_005268184 Length = 495 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KYEQSN 9 KYE+SN Sbjct: 402 KYEESN 407>XP_005268183 Length = 536 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KYEQSN 9 KYE+SN Sbjct: 443 KYEESN 448>XP_006716233 Length = 542 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DLKYEQSN 9 DL+YE N Sbjct: 362 DLRYEAQN 369>XP_006715523 Length = 149 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EDLKYEQS 8 EDLK EQ+ Sbjct: 118 EDLKKEQN 125>NP_443085 Length = 626 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DLKYEQSN 9 DL+YE N Sbjct: 362 DLRYEAQN 369>NP_000892 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 DLKYEQSN 9 D YEQ N Sbjct: 116 DYSYEQQN 123>NP_001159576 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 DLKYEQSN 9 D YEQ N Sbjct: 116 DYSYEQQN 123>NP_064581 Length = 855 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 EDLKYEQ 7 EDL YE+ Sbjct: 20 EDLPYEE 26>NP_001244025 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DLKYEQS 8 D+KY QS Sbjct: 348 DIKYTQS 354>NP_006183 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DLKYEQS 8 D+KY QS Sbjct: 348 DIKYTQS 354>XP_006714285 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 DLKYEQSN 9 D YEQ N Sbjct: 116 DYSYEQQN 123>XP_005263071 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 DLKYEQSN 9 D YEQ N Sbjct: 116 DYSYEQQN 123Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.290 0.116 0.290 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 640,601 Number of extensions: 1139 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |