Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 18 1935 NP_005913 18 1935 XP_005267046 18 1935 XP_005267045 18 1935 NP_036553 16 5631 NP_065928 16 5631 XP_006722539 16 5631 XP_005256527 16 5631 NP_001129652 16 5631 NP_055084 16 7355 NP_001265055 16 7355 NP_001265056 16 7355 NP_001124177 16 7355 NP_001124175 16 7355 NP_001124176 16 7355 NP_055730 16 7355 NP_001242982 16 7355 NP_001265054 16 7355 NP_064450 16 7355 NP_060009 16 7355 XP_006721125 16 7355 XP_006717494 16 7355 XP_006717493 16 7355 XP_006717492 16 7355 XP_006717491 16 7355 XP_006717490 16 7355 XP_006717489 16 7355 XP_006717488 16 7355 XP_006717487 16 7355 XP_006717486 16 7355 XP_005262762 16 7355 XP_005262761 16 7355 XP_005273257 16 7355 XP_006710739 16 7355 XP_005270979 16 7355 NP_056972 16 7355 NP_001265524 15 9605 NP_877577 15 9605 NP_005907 15 9605 NP_056265 15 9605 NP_001036059 15 9605 NP_115666 15 9605 NP_005344 15 9605 NP_001157888 15 9605 XP_006724703 15 9605 XP_005250405 15 9605 XP_006715980 15 9605 XP_005272170 15 9605 NP_005889 15 9605 NP_976240 15 9605>NP_006715 Length = 1558 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EDIQKSVRL 9 E IQKSVRL Sbjct: 1245 EAIQKSVRL 1253>NP_005913 Length = 1608 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EDIQKSVRL 9 E IQKSVRL Sbjct: 1295 EAIQKSVRL 1303>XP_005267046 Length = 1554 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EDIQKSVRL 9 E IQKSVRL Sbjct: 1241 EAIQKSVRL 1249>XP_005267045 Length = 1604 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EDIQKSVRL 9 E IQKSVRL Sbjct: 1291 EAIQKSVRL 1299>NP_036553 Length = 1914 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DIQKSVRL 9 DI+KSV+L Sbjct: 833 DIKKSVKL 840>NP_065928 Length = 4427 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EDIQKSV 7 EDIQKS+ Sbjct: 1514 EDIQKSL 1520>XP_006722539 Length = 75 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EDIQKSVR 8 ED+QK+V+ Sbjct: 48 EDLQKNVK 55>XP_005256527 Length = 4427 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EDIQKSV 7 EDIQKS+ Sbjct: 1514 EDIQKSL 1520>NP_001129652 Length = 74 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EDIQKSVR 8 ED+QK+V+ Sbjct: 48 EDLQKNVK 55>NP_055084 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDIQKSVRL 9 +D++KSV L Sbjct: 260 DDVRKSVHL 268>NP_001265055 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDIQKSVRL 9 +D++KSV L Sbjct: 260 DDVRKSVHL 268>NP_001265056 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDIQKSVRL 9 +D++KSV L Sbjct: 260 DDVRKSVHL 268>NP_001124177 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDIQKSVRL 9 +D++KSV L Sbjct: 260 DDVRKSVHL 268>NP_001124175 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDIQKSVRL 9 +D++KSV L Sbjct: 260 DDVRKSVHL 268>NP_001124176 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDIQKSVRL 9 +D++KSV L Sbjct: 260 DDVRKSVHL 268>NP_055730 Length = 1710 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 EDIQKSVR 8 ED+QK+++ Sbjct: 954 EDLQKTIK 961>NP_001242982 Length = 1709 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 EDIQKSVR 8 ED+QK+++ Sbjct: 953 EDLQKTIK 960>NP_001265054 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDIQKSVRL 9 +D++KSV L Sbjct: 260 DDVRKSVHL 268>NP_064450 Length = 1722 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DIQKSVRL 9 DIQ+++RL Sbjct: 198 DIQQAIRL 205>NP_060009 Length = 4116 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EDIQKSVRL 9 +D++K +RL Sbjct: 2294 QDVEKCIRL 2302>XP_006721125 Length = 4070 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EDIQKSVRL 9 +D++K +RL Sbjct: 2248 QDVEKCIRL 2256>XP_006717494 Length = 1571 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 EDIQKSVR 8 ED+QK+++ Sbjct: 815 EDLQKTIK 822>XP_006717493 Length = 1610 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 EDIQKSVR 8 ED+QK+++ Sbjct: 854 EDLQKTIK 861>XP_006717492 Length = 1635 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 EDIQKSVR 8 ED+QK+++ Sbjct: 1316 EDLQKTIK 1323>XP_006717491 Length = 1677 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 EDIQKSVR 8 ED+QK+++ Sbjct: 921 EDLQKTIK 928>XP_006717490 Length = 1791 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 EDIQKSVR 8 ED+QK+++ Sbjct: 1035 EDLQKTIK 1042>XP_006717489 Length = 1945 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 EDIQKSVR 8 ED+QK+++ Sbjct: 1316 EDLQKTIK 1323>XP_006717488 Length = 2031 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 EDIQKSVR 8 ED+QK+++ Sbjct: 1316 EDLQKTIK 1323>XP_006717487 Length = 2071 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 EDIQKSVR 8 ED+QK+++ Sbjct: 1315 EDLQKTIK 1322>XP_006717486 Length = 2072 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 EDIQKSVR 8 ED+QK+++ Sbjct: 1316 EDLQKTIK 1323>XP_005262762 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDIQKSVRL 9 +D++KSV L Sbjct: 260 DDVRKSVHL 268>XP_005262761 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDIQKSVRL 9 +D++KSV L Sbjct: 260 DDVRKSVHL 268>XP_005273257 Length = 1726 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DIQKSVRL 9 DIQ+++RL Sbjct: 198 DIQQAIRL 205>XP_006710739 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EDIQKSVR 8 ED+QKS++ Sbjct: 525 EDLQKSLQ 532>XP_005270979 Length = 728 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EDIQKSVR 8 ED+QKS++ Sbjct: 525 EDLQKSLQ 532>NP_056972 Length = 728 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EDIQKSVR 8 ED+QKS++ Sbjct: 525 EDLQKSLQ 532>NP_001265524 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EDIQKSVRL 9 ED+ +++RL Sbjct: 452 EDVNEAIRL 460>NP_877577 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EDIQKSVRL 9 ED+ +++RL Sbjct: 452 EDVNEAIRL 460>NP_005907 Length = 719 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EDIQKSVRL 9 ED+ +++RL Sbjct: 628 EDVNEAIRL 636>NP_056265 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EDIQKSV 7 +D+QKSV Sbjct: 577 DDLQKSV 583>NP_001036059 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EDIQKSV 7 +D+QKSV Sbjct: 446 DDLQKSV 452>NP_115666 Length = 1058 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EDIQKSVRL 9 EDIQ+S L Sbjct: 302 EDIQRSYTL 310>NP_005344 Length = 1161 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DIQKSVR 8 DIQ SVR Sbjct: 667 DIQSSVR 673>NP_001157888 Length = 154 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DIQKSVRL 9 DIQ +VRL Sbjct: 116 DIQMAVRL 123>XP_006724703 Length = 154 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DIQKSVRL 9 DIQ +VRL Sbjct: 116 DIQMAVRL 123>XP_005250405 Length = 612 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EDIQKSVRL 9 ED+ +++RL Sbjct: 521 EDVNEAIRL 529>XP_006715980 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EDIQKSV 7 +D+QKSV Sbjct: 577 DDLQKSV 583>XP_005272170 Length = 1058 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EDIQKSVRL 9 EDIQ+S L Sbjct: 302 EDIQRSYTL 310>NP_005889 Length = 709 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 EDIQKSVR 8 +DIQK+++ Sbjct: 121 QDIQKTIK 128>NP_976240 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 EDIQKSVR 8 +DIQK+++ Sbjct: 121 QDIQKTIK 128Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.132 0.314 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 358,155 Number of extensions: 558 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |