Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004251 20 509 NP_055904 17 3301 XP_006715095 17 3301 XP_006715094 17 3301 XP_006715093 17 3301 XP_006715092 17 3301 NP_775794 16 5631 NP_001073847 16 7355 NP_001073848 16 7355 NP_689623 16 7355 XP_005266883 16 7355 XP_006715408 16 7355 XP_005266882 16 7355 XP_006715407 16 7355 XP_005266881 16 7355 XP_006715406 16 7355 NP_115582 15 9605 NP_001078816 15 9605 NP_001127902 15 9605 NP_569726 15 9605 NP_115746 15 9605 NP_775919 15 9605 XP_006722985 15 9605 XP_005256255 15 9605 XP_006721362 15 9605 XP_006721361 15 9605 XP_005256254 15 9605 XP_005256253 15 9605 XP_005256252 15 9605 XP_005256251 15 9605 XP_006721360 15 9605 XP_005256250 15 9605 XP_006712503 15 9605 NP_001139647 15 9605 NP_001001694 15 9605>NP_004251 Length = 1208 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVAQHLVVA 9 DVAQHL VA Sbjct: 651 DVAQHLAVA 659>NP_055904 Length = 2517 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DVAQHLV 7 DVAQHL+ Sbjct: 2022 DVAQHLL 2028>XP_006715095 Length = 2046 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DVAQHLV 7 DVAQHL+ Sbjct: 1551 DVAQHLL 1557>XP_006715094 Length = 2407 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DVAQHLV 7 DVAQHL+ Sbjct: 1912 DVAQHLL 1918>XP_006715093 Length = 2459 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DVAQHLV 7 DVAQHL+ Sbjct: 1964 DVAQHLL 1970>XP_006715092 Length = 2490 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DVAQHLV 7 DVAQHL+ Sbjct: 1995 DVAQHLL 2001>NP_775794 Length = 407 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AQHLVVA 9 +QHLVVA Sbjct: 241 SQHLVVA 247>NP_001073847 Length = 257 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VAQHLVVA 9 V QHLVV+ Sbjct: 171 VLQHLVVS 178>NP_001073848 Length = 257 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VAQHLVVA 9 V QHLVV+ Sbjct: 171 VLQHLVVS 178>NP_689623 Length = 296 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VAQHLVVA 9 V QHLVV+ Sbjct: 171 VLQHLVVS 178>XP_005266883 Length = 211 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VAQHLVVA 9 V QHLVV+ Sbjct: 171 VLQHLVVS 178>XP_006715408 Length = 212 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VAQHLVVA 9 V QHLVV+ Sbjct: 171 VLQHLVVS 178>XP_005266882 Length = 214 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VAQHLVVA 9 V QHLVV+ Sbjct: 171 VLQHLVVS 178>XP_006715407 Length = 221 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VAQHLVVA 9 V QHLVV+ Sbjct: 171 VLQHLVVS 178>XP_005266881 Length = 221 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VAQHLVVA 9 V QHLVV+ Sbjct: 171 VLQHLVVS 178>XP_006715406 Length = 257 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VAQHLVVA 9 V QHLVV+ Sbjct: 171 VLQHLVVS 178>NP_115582 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVAQHL 6 D+AQHL Sbjct: 1839 DMAQHL 1844>NP_001078816 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVAQHL 6 D+AQHL Sbjct: 55 DLAQHL 60>NP_001127902 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVAQHL 6 D+AQHL Sbjct: 55 DLAQHL 60>NP_569726 Length = 253 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVAQHL 6 D+AQHL Sbjct: 55 DLAQHL 60>NP_115746 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVAQHL 6 D+AQHL Sbjct: 125 DLAQHL 130>NP_775919 Length = 1530 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVAQHL 6 D+AQHL Sbjct: 1075 DLAQHL 1080>XP_006722985 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVAQHL 6 D+AQHL Sbjct: 145 DLAQHL 150>XP_005256255 Length = 1809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVAQHL 6 D+AQHL Sbjct: 1782 DMAQHL 1787>XP_006721362 Length = 1810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVAQHL 6 D+AQHL Sbjct: 1783 DMAQHL 1788>XP_006721361 Length = 1836 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVAQHL 6 D+AQHL Sbjct: 1809 DMAQHL 1814>XP_005256254 Length = 1837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVAQHL 6 D+AQHL Sbjct: 1810 DMAQHL 1815>XP_005256253 Length = 1838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVAQHL 6 D+AQHL Sbjct: 1811 DMAQHL 1816>XP_005256252 Length = 1865 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVAQHL 6 D+AQHL Sbjct: 1838 DMAQHL 1843>XP_005256251 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVAQHL 6 D+AQHL Sbjct: 1839 DMAQHL 1844>XP_006721360 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVAQHL 6 D+AQHL Sbjct: 1839 DMAQHL 1844>XP_005256250 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVAQHL 6 D+AQHL Sbjct: 1839 DMAQHL 1844>XP_006712503 Length = 1470 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVAQHL 6 D+AQHL Sbjct: 1015 DLAQHL 1020>NP_001139647 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVAQHL 6 D+AQHL Sbjct: 125 DLAQHL 130>NP_001001694 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VAQHLVV 8 VAQHL V Sbjct: 85 VAQHLYV 91Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.132 0.356 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 494,064 Number of extensions: 550 Number of successful extensions: 35 Number of sequences better than 10000.0: 35 Number of HSP's gapped: 35 Number of HSP's successfully gapped: 35 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |