Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 21 229 XP_005271621 21 229 XP_006718907 21 229 XP_006718906 21 229 XP_005271619 21 229 XP_005271618 21 229 XP_006722749 17 2528 XP_005259870 17 2528 XP_006722748 17 2528 XP_006722747 17 2528 NP_775815 17 2528 NP_001091994 17 2528 NP_002438 16 7355 NP_001231866 16 7355 NP_005467 16 7355 NP_001177312 16 7355 NP_001177313 16 7355 NP_001177317 16 7355 NP_001121699 16 7355 NP_001269847 16 7355 NP_065069 16 7355 NP_775922 16 7355 NP_001269846 16 7355 XP_005260522 16 7355 XP_005260521 16 7355 XP_005260520 16 7355 XP_005260519 16 7355 XP_005251391 16 7355 XP_005265227 16 7355 NP_005237 15 9605 NP_787069 15 9605 NP_001269238 15 9605 NP_001269239 15 9605 NP_473361 15 9605 NP_065899 15 9605 NP_060526 15 9605 XP_005252606 15 9605 XP_005271980 15 9605 XP_006714636 15 9605 XP_006714635 15 9605 XP_005271046 15 9605 XP_005271045 15 9605 XP_006710788 15 9605 XP_006710787 15 9605>NP_000042 Length = 3056 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DSGMAQQRD 9 DSGMAQQR+ Sbjct: 1305 DSGMAQQRE 1313>XP_005271621 Length = 2708 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DSGMAQQRD 9 DSGMAQQR+ Sbjct: 957 DSGMAQQRE 965>XP_006718907 Length = 3050 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DSGMAQQRD 9 DSGMAQQR+ Sbjct: 1299 DSGMAQQRE 1307>XP_006718906 Length = 3056 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DSGMAQQRD 9 DSGMAQQR+ Sbjct: 1305 DSGMAQQRE 1313>XP_005271619 Length = 3056 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DSGMAQQRD 9 DSGMAQQR+ Sbjct: 1305 DSGMAQQRE 1313>XP_005271618 Length = 3056 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DSGMAQQRD 9 DSGMAQQR+ Sbjct: 1305 DSGMAQQRE 1313>XP_006722749 Length = 635 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DSGMAQQR 8 DSG+AQ+R Sbjct: 487 DSGLAQRR 494>XP_005259870 Length = 592 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DSGMAQQR 8 DSG+AQ+R Sbjct: 487 DSGLAQRR 494>XP_006722748 Length = 620 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DSGMAQQR 8 DSG+AQ+R Sbjct: 487 DSGLAQRR 494>XP_006722747 Length = 622 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DSGMAQQR 8 DSG+AQ+R Sbjct: 487 DSGLAQRR 494>NP_775815 Length = 697 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DSGMAQQR 8 DSG+AQ+R Sbjct: 518 DSGLAQRR 525>NP_001091994 Length = 651 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DSGMAQQR 8 DSG+AQ+R Sbjct: 518 DSGLAQRR 525>NP_002438 Length = 1400 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 DSGMAQQRD 9 DSG QRD Sbjct: 493 DSGQPVQRD 501>NP_001231866 Length = 1351 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 DSGMAQQRD 9 DSG QRD Sbjct: 493 DSGQPVQRD 501>NP_005467 Length = 722 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SGMAQQRD 9 SGMA QR+ Sbjct: 592 SGMALQRE 599>NP_001177312 Length = 648 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SGMAQQRD 9 SGMA QR+ Sbjct: 518 SGMALQRE 525>NP_001177313 Length = 612 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SGMAQQRD 9 SGMA QR+ Sbjct: 482 SGMALQRE 489>NP_001177317 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SGMAQQRD 9 SGMA QR+ Sbjct: 587 SGMALQRE 594>NP_001121699 Length = 753 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SGMAQQRD 9 SGMA QR+ Sbjct: 623 SGMALQRE 630>NP_001269847 Length = 1491 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGMAQQ 7 SGMAQQ Sbjct: 1060 SGMAQQ 1065>NP_065069 Length = 1494 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGMAQQ 7 SGMAQQ Sbjct: 1064 SGMAQQ 1069>NP_775922 Length = 6996 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DSGMAQQRD 9 D+G+ Q+RD Sbjct: 481 DNGINQKRD 489>NP_001269846 Length = 1494 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGMAQQ 7 SGMAQQ Sbjct: 1064 SGMAQQ 1069>XP_005260522 Length = 1495 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGMAQQ 7 SGMAQQ Sbjct: 1064 SGMAQQ 1069>XP_005260521 Length = 1503 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGMAQQ 7 SGMAQQ Sbjct: 1072 SGMAQQ 1077>XP_005260520 Length = 1506 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGMAQQ 7 SGMAQQ Sbjct: 1076 SGMAQQ 1081>XP_005260519 Length = 1507 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGMAQQ 7 SGMAQQ Sbjct: 1076 SGMAQQ 1081>XP_005251391 Length = 702 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SGMAQQRD 9 SGMA QR+ Sbjct: 572 SGMALQRE 579>XP_005265227 Length = 1401 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 DSGMAQQRD 9 DSG QRD Sbjct: 493 DSGQPVQRD 501>NP_005237 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DSGMAQQRD 9 D GM++Q D Sbjct: 702 DFGMSRQED 710>NP_787069 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DSGMAQQRD 9 D G+A +RD Sbjct: 334 DRGLAAKRD 342>NP_001269238 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DSGMAQQRD 9 D G +QQR+ Sbjct: 392 DRGASQQRE 400>NP_001269239 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DSGMAQQRD 9 D G +QQR+ Sbjct: 398 DRGASQQRE 406>NP_473361 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DSGMAQQRD 9 D G +QQR+ Sbjct: 392 DRGASQQRE 400>NP_065899 Length = 1359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DSGMAQQRD 9 +SG+ QRD Sbjct: 510 NSGLPNQRD 518>NP_060526 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SGMAQQRD 9 SG+A+ RD Sbjct: 230 SGLAKSRD 237>XP_005252606 Length = 1221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DSGMAQQRD 9 +SG+ QRD Sbjct: 372 NSGLPNQRD 380>XP_005271980 Length = 749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DSGMAQQRD 9 D GM++Q D Sbjct: 629 DFGMSRQED 637>XP_006714636 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DSGMAQQRD 9 D GM++Q D Sbjct: 702 DFGMSRQED 710>XP_006714635 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DSGMAQQRD 9 D GM++Q D Sbjct: 702 DFGMSRQED 710>XP_005271046 Length = 293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SGMAQQRD 9 SG+A+ RD Sbjct: 31 SGLAKSRD 38>XP_005271045 Length = 365 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SGMAQQRD 9 SG+A+ RD Sbjct: 103 SGLAKSRD 110>XP_006710788 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SGMAQQRD 9 SG+A+ RD Sbjct: 230 SGLAKSRD 237>XP_006710787 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SGMAQQRD 9 SG+A+ RD Sbjct: 230 SGLAKSRD 237Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.120 0.318 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 521,776 Number of extensions: 572 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |