Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 299 XP_006718908 20 299 XP_005271621 20 299 XP_006718907 20 299 XP_006718906 20 299 XP_005271619 20 299 XP_005271618 20 299 NP_542376 17 2528 NP_004361 17 2528 XP_006715397 17 2528 NP_066933 17 3301 NP_001265874 17 3301 NP_060962 17 3301 XP_005251116 17 3301 XP_006716714 17 3301 XP_006716431 17 3301 NP_000050 16 5631 NP_005397 16 5631 NP_001127958 16 5631 NP_536724 16 5631 NP_443174 16 5631 NP_001078956 16 7355 NP_981953 16 7355 NP_060011 16 7355 NP_001161693 16 7355 XP_005246404 16 7355 XP_006710377 16 7355 NP_079163 15 9605 NP_001230494 15 9605 NP_995583 15 9605 NP_001230493 15 9605 NP_663788 15 9605 NP_001106984 15 9605 NP_001106983 15 9605 NP_060517 15 9605 NP_036475 15 9605 XP_006720023 15 9605 XP_005254148 15 9605 XP_005254146 15 9605 XP_006720020 15 9605 XP_005254144 15 9605 XP_006720019 15 9605 XP_005254143 15 9605 XP_005254142 15 9605 XP_005268536 15 9605 XP_005248331 15 9605 XP_006710983 15 9605 XP_006710978 15 9605 XP_006710977 15 9605 XP_006710976 15 9605 XP_006710975 15 9605 NP_892022 15 9605>NP_000042 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DQSFNKVVE 9 DQSFNKV E Sbjct: 2999 DQSFNKVAE 3007>XP_006718908 Length = 1708 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DQSFNKVVE 9 DQSFNKV E Sbjct: 1651 DQSFNKVAE 1659>XP_005271621 Length = 2708 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DQSFNKVVE 9 DQSFNKV E Sbjct: 2651 DQSFNKVAE 2659>XP_006718907 Length = 3050 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DQSFNKVVE 9 DQSFNKV E Sbjct: 2993 DQSFNKVAE 3001>XP_006718906 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DQSFNKVVE 9 DQSFNKV E Sbjct: 2999 DQSFNKVAE 3007>XP_005271619 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DQSFNKVVE 9 DQSFNKV E Sbjct: 2999 DQSFNKVAE 3007>XP_005271618 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DQSFNKVVE 9 DQSFNKV E Sbjct: 2999 DQSFNKVAE 3007>NP_542376 Length = 1899 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DQSFNKVVE 9 D +FNKVV+ Sbjct: 1172 DDNFNKVVK 1180>NP_004361 Length = 3063 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DQSFNKVVE 9 D +FNKVV+ Sbjct: 2336 DDNFNKVVK 2344>XP_006715397 Length = 2972 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DQSFNKVVE 9 D +FNKVV+ Sbjct: 2245 DDNFNKVVK 2253>NP_066933 Length = 1796 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DQSFNKVV 8 D++FNK++ Sbjct: 1045 DENFNKII 1052>NP_001265874 Length = 333 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DQSFNKVVE 9 D+S+ KV+E Sbjct: 298 DESYQKVIE 306>NP_060962 Length = 322 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DQSFNKVVE 9 D+S+ KV+E Sbjct: 287 DESYQKVIE 295>XP_005251116 Length = 1780 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DQSFNKVV 8 D++FNK++ Sbjct: 1045 DENFNKII 1052>XP_006716714 Length = 1796 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DQSFNKVV 8 D++FNK++ Sbjct: 1045 DENFNKII 1052>XP_006716431 Length = 322 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DQSFNKVVE 9 D+S+ KV+E Sbjct: 287 DESYQKVIE 295>NP_000050 Length = 3418 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QSFNKVV 8 +SFNK+V Sbjct: 1441 ESFNKIV 1447>NP_005397 Length = 1354 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DQSFNKVVE 9 +QSF KVV+ Sbjct: 1339 NQSFRKVVK 1347>NP_001127958 Length = 586 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DQSFNKVVE 9 DQSF K +E Sbjct: 375 DQSFQKELE 383>NP_536724 Length = 435 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 QSFNKVV 8 Q FNKVV Sbjct: 100 QDFNKVV 106>NP_443174 Length = 586 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DQSFNKVVE 9 DQSF K +E Sbjct: 375 DQSFQKELE 383>NP_001078956 Length = 828 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DQSFNKVVE 9 DQ FN++++ Sbjct: 313 DQKFNELIK 321>NP_981953 Length = 791 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 DQSFNKVVE 9 DQ F KV E Sbjct: 641 DQKFKKVKE 649>NP_060011 Length = 178 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QSFNKVVE 9 QSF ++VE Sbjct: 171 QSFRRIVE 178>NP_001161693 Length = 1820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QSFNKVV 8 +SFNK+V Sbjct: 1686 KSFNKIV 1692>XP_005246404 Length = 1821 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QSFNKVV 8 +SFNK+V Sbjct: 1687 KSFNKIV 1693>XP_006710377 Length = 827 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DQSFNKVVE 9 DQ FN++++ Sbjct: 313 DQKFNELIK 321>NP_079163 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QSFNKVVE 9 Q FNK+ E Sbjct: 53 QGFNKLAE 60>NP_001230494 Length = 294 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QSFNKVVE 9 Q FNK+ E Sbjct: 53 QGFNKLAE 60>NP_995583 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QSFNKVVE 9 Q FNK+ E Sbjct: 53 QGFNKLAE 60>NP_001230493 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QSFNKVVE 9 Q FNK+ E Sbjct: 53 QGFNKLAE 60>NP_663788 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QSFNKVV 8 Q+FNKV+ Sbjct: 95 QNFNKVL 101>NP_001106984 Length = 753 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QSFNKVV 8 Q+FNKV+ Sbjct: 66 QNFNKVL 72>NP_001106983 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QSFNKVV 8 Q+FNKV+ Sbjct: 116 QNFNKVL 122>NP_060517 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DQSFNKVV 8 ++SFNK++ Sbjct: 285 EKSFNKLI 292>NP_036475 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 QSFNKVVE 9 Q FN VVE Sbjct: 85 QGFNVVVE 92>XP_006720023 Length = 679 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QSFNKVV 8 Q+FNKV+ Sbjct: 95 QNFNKVL 101>XP_005254148 Length = 721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QSFNKVV 8 Q+FNKV+ Sbjct: 13 QNFNKVL 19>XP_005254146 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QSFNKVV 8 Q+FNKV+ Sbjct: 13 QNFNKVL 19>XP_006720020 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QSFNKVV 8 Q+FNKV+ Sbjct: 19 QNFNKVL 25>XP_005254144 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QSFNKVV 8 Q+FNKV+ Sbjct: 95 QNFNKVL 101>XP_006720019 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QSFNKVV 8 Q+FNKV+ Sbjct: 95 QNFNKVL 101>XP_005254143 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QSFNKVV 8 Q+FNKV+ Sbjct: 95 QNFNKVL 101>XP_005254142 Length = 874 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QSFNKVV 8 Q+FNKV+ Sbjct: 95 QNFNKVL 101>XP_005268536 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DQSFNKVV 8 ++SFNK++ Sbjct: 404 EKSFNKLI 411>XP_005248331 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 QSFNKVVE 9 Q FN VVE Sbjct: 85 QGFNVVVE 92>XP_006710983 Length = 188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QSFNKVVE 9 Q FNK+ E Sbjct: 53 QGFNKLAE 60>XP_006710978 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QSFNKVVE 9 Q FNK+ E Sbjct: 53 QGFNKLAE 60>XP_006710977 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QSFNKVVE 9 Q FNK+ E Sbjct: 53 QGFNKLAE 60>XP_006710976 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QSFNKVVE 9 Q FNK+ E Sbjct: 53 QGFNKLAE 60>XP_006710975 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 QSFNKVVE 9 Q FNK+ E Sbjct: 53 QGFNKLAE 60>NP_892022 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 QSFNKVVE 9 Q FN VVE Sbjct: 85 QGFNVVVE 92Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.125 0.317 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 455,451 Number of extensions: 753 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |