Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1935 NP_671714 18 1935 XP_006715890 18 1935 XP_005250160 18 1935 XP_005250159 18 1935 NP_114426 17 3301 NP_001138666 17 4312 NP_689718 17 4312 XP_006724036 17 4312 XP_006724035 17 4312 XP_006724034 17 4312 XP_006724033 17 4312 XP_006724032 17 4312 XP_006724031 17 4312 XP_005260983 17 4312 XP_006724030 17 4312 NP_001231509 16 5631 NP_003487 16 5631 NP_000611 16 5631 NP_001191147 16 5631 NP_001191142 16 5631 NP_001191143 16 5631 NP_004022 16 5631 NP_004020 16 5631 NP_001563 16 5631 XP_006725202 16 5631 XP_005252965 16 5631 XP_006725201 16 5631 XP_006725200 16 5631 XP_006719491 16 5631 XP_006719490 16 5631 XP_006719489 16 5631 XP_005268677 16 5631 XP_006719281 16 5631 XP_006719280 16 5631 XP_005268675 16 5631 XP_005268674 16 5631 XP_005252966 16 5631 XP_005252964 16 5631 XP_005252963 16 5631 NP_689705 16 5631 NP_057332 16 7355 NP_705618 16 7355 NP_004289 16 7355 NP_001265241 16 7355 XP_005266305 16 7355 XP_005266304 16 7355 NP_001273758 15 9605 NP_660202 15 9605 NP_003815 15 9605>NP_005742 Length = 3907 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DLLQAIQQI 9 DLLQA QQI Sbjct: 262 DLLQAKQQI 270>NP_671714 Length = 3899 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DLLQAIQQI 9 DLLQA QQI Sbjct: 262 DLLQAKQQI 270>XP_006715890 Length = 3860 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DLLQAIQQI 9 DLLQA QQI Sbjct: 262 DLLQAKQQI 270>XP_005250160 Length = 3939 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DLLQAIQQI 9 DLLQA QQI Sbjct: 262 DLLQAKQQI 270>XP_005250159 Length = 3952 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DLLQAIQQI 9 DLLQA QQI Sbjct: 262 DLLQAKQQI 270>NP_114426 Length = 273 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DLLQAIQQ 8 DLLQA+Q+ Sbjct: 96 DLLQAVQR 103>NP_001138666 Length = 69 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LLQAIQQI 9 +LQA+QQ+ Sbjct: 30 ILQAVQQV 37>NP_689718 Length = 670 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DLLQAIQQI 9 D+LQA+Q++ Sbjct: 240 DILQALQKL 248>XP_006724036 Length = 540 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DLLQAIQQI 9 D+LQA+Q++ Sbjct: 110 DILQALQKL 118>XP_006724035 Length = 540 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DLLQAIQQI 9 D+LQA+Q++ Sbjct: 110 DILQALQKL 118>XP_006724034 Length = 624 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DLLQAIQQI 9 D+LQA+Q++ Sbjct: 240 DILQALQKL 248>XP_006724033 Length = 670 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DLLQAIQQI 9 D+LQA+Q++ Sbjct: 240 DILQALQKL 248>XP_006724032 Length = 670 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DLLQAIQQI 9 D+LQA+Q++ Sbjct: 240 DILQALQKL 248>XP_006724031 Length = 670 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DLLQAIQQI 9 D+LQA+Q++ Sbjct: 240 DILQALQKL 248>XP_005260983 Length = 670 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DLLQAIQQI 9 D+LQA+Q++ Sbjct: 240 DILQALQKL 248>XP_006724030 Length = 670 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DLLQAIQQI 9 D+LQA+Q++ Sbjct: 240 DILQALQKL 248>NP_001231509 Length = 3859 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLQAIQQI 9 LLQA QQI Sbjct: 2933 LLQAAQQI 2940>NP_003487 Length = 3830 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLQAIQQI 9 LLQA QQI Sbjct: 2915 LLQAAQQI 2922>NP_000611 Length = 1434 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 DLLQAIQQI 9 D+L+AIQ+I Sbjct: 1362 DVLKAIQRI 1370>NP_001191147 Length = 1468 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 DLLQAIQQI 9 D+L+AIQ+I Sbjct: 1396 DVLKAIQRI 1404>NP_001191142 Length = 1098 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 DLLQAIQQI 9 D+L+AIQ+I Sbjct: 1026 DVLKAIQRI 1034>NP_001191143 Length = 1098 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 DLLQAIQQI 9 D+L+AIQ+I Sbjct: 1026 DVLKAIQRI 1034>NP_004022 Length = 516 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLQAIQQ 8 LLQA+QQ Sbjct: 196 LLQAVQQ 202>NP_004020 Length = 474 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLQAIQQ 8 LLQA+QQ Sbjct: 183 LLQAVQQ 189>NP_001563 Length = 503 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLQAIQQ 8 LLQA+QQ Sbjct: 183 LLQAVQQ 189>XP_006725202 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLQAIQQ 8 LLQA+QQ Sbjct: 196 LLQAVQQ 202>XP_005252965 Length = 502 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLQAIQQ 8 LLQA+QQ Sbjct: 182 LLQAVQQ 188>XP_006725201 Length = 515 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLQAIQQ 8 LLQA+QQ Sbjct: 195 LLQAVQQ 201>XP_006725200 Length = 516 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLQAIQQ 8 LLQA+QQ Sbjct: 196 LLQAVQQ 202>XP_006719491 Length = 1434 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 DLLQAIQQI 9 D+L+AIQ+I Sbjct: 1362 DVLKAIQRI 1370>XP_006719490 Length = 1468 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 DLLQAIQQI 9 D+L+AIQ+I Sbjct: 1396 DVLKAIQRI 1404>XP_006719489 Length = 1468 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 DLLQAIQQI 9 D+L+AIQ+I Sbjct: 1396 DVLKAIQRI 1404>XP_005268677 Length = 976 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLQAIQQI 9 LLQ++QQI Sbjct: 797 LLQSLQQI 804>XP_006719281 Length = 1004 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLQAIQQI 9 LLQ++QQI Sbjct: 797 LLQSLQQI 804>XP_006719280 Length = 1004 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLQAIQQI 9 LLQ++QQI Sbjct: 797 LLQSLQQI 804>XP_005268675 Length = 1004 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLQAIQQI 9 LLQ++QQI Sbjct: 797 LLQSLQQI 804>XP_005268674 Length = 1004 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLQAIQQI 9 LLQ++QQI Sbjct: 797 LLQSLQQI 804>XP_005252966 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLQAIQQ 8 LLQA+QQ Sbjct: 196 LLQAVQQ 202>XP_005252964 Length = 515 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLQAIQQ 8 LLQA+QQ Sbjct: 195 LLQAVQQ 201>XP_005252963 Length = 516 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLQAIQQ 8 LLQA+QQ Sbjct: 196 LLQAVQQ 202>NP_689705 Length = 656 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DLLQAIQQI 9 D+L+A+Q+I Sbjct: 610 DILEALQRI 618>NP_057332 Length = 1901 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DLLQAIQQ 8 DLLQA+ Q Sbjct: 1869 DLLQAVLQ 1876>NP_705618 Length = 1391 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LQAIQQI 9 LQAIQQ+ Sbjct: 778 LQAIQQL 784>NP_004289 Length = 1332 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LQAIQQI 9 LQAIQQ+ Sbjct: 719 LQAIQQL 725>NP_001265241 Length = 1327 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LQAIQQI 9 LQAIQQ+ Sbjct: 778 LQAIQQL 784>XP_005266305 Length = 1856 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DLLQAIQQ 8 DLLQA+ Q Sbjct: 1824 DLLQAVLQ 1831>XP_005266304 Length = 1873 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DLLQAIQQ 8 DLLQA+ Q Sbjct: 1841 DLLQAVLQ 1848>NP_001273758 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DLLQAIQQI 9 DLLQ Q+I Sbjct: 323 DLLQQAQEI 331>NP_660202 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DLLQAIQQI 9 DLLQ Q+I Sbjct: 323 DLLQQAQEI 331>NP_003815 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DLLQAIQQ 8 DL+Q +QQ Sbjct: 175 DLVQEVQQ 182Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.143 0.344 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 355,288 Number of extensions: 948 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |