Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 509 XP_005262424 20 509 NP_006794 17 2528 NP_001127768 17 2528 XP_006716339 17 2528 NP_073617 16 5631 NP_001248755 16 5631 NP_003929 16 5631 NP_001245240 16 5631 NP_689757 16 5631 XP_006722995 16 5631 XP_005248007 16 5631 XP_006713925 16 5631 NP_777582 16 7355 XP_006726821 16 7355 XP_006726820 16 7355 XP_006726819 16 7355 XP_006726818 16 7355 XP_006726817 16 7355 XP_006726816 16 7355 XP_006726815 16 7355 XP_006726814 16 7355 XP_006726813 16 7355 XP_006726812 16 7355 XP_006726811 16 7355 XP_006726810 16 7355 XP_006722325 16 7355 XP_006716590 16 7355 XP_006716589 16 7355 XP_005269407 16 7355 XP_006710099 16 7355 NP_037506 15 9605 NP_001155901 15 9605 NP_001243121 15 9605 NP_057070 15 9605 XP_006722004 15 9605>NP_722576 Length = 3080 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DLKGTMSL 8 DLKGTMSL Sbjct: 2938 DLKGTMSL 2945>XP_005262424 Length = 2875 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DLKGTMSL 8 DLKGTMSL Sbjct: 2733 DLKGTMSL 2740>NP_006794 Length = 418 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LKGTMSL 8 LKGTMSL Sbjct: 354 LKGTMSL 360>NP_001127768 Length = 418 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LKGTMSL 8 LKGTMSL Sbjct: 354 LKGTMSL 360>XP_006716339 Length = 418 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LKGTMSL 8 LKGTMSL Sbjct: 354 LKGTMSL 360>NP_073617 Length = 391 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DLKGTMSLI 9 +L GT+SL+ Sbjct: 52 ELSGTLSLV 60>NP_001248755 Length = 1215 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LKGTMSLI 9 LKGT+S I Sbjct: 1079 LKGTLSFI 1086>NP_003929 Length = 1153 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LKGTMSLI 9 LKGT+S I Sbjct: 1017 LKGTLSFI 1024>NP_001245240 Length = 524 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LKGTMSLI 9 +KG MSLI Sbjct: 397 MKGNMSLI 404>NP_689757 Length = 757 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DLKGTMSLI 9 D K T+SLI Sbjct: 289 DFKSTLSLI 297>XP_006722995 Length = 1203 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LKGTMSLI 9 LKGT+S I Sbjct: 1067 LKGTLSFI 1074>XP_005248007 Length = 516 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DLKGTMSLI 9 D K T+SLI Sbjct: 48 DFKSTLSLI 56>XP_006713925 Length = 685 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DLKGTMSLI 9 D K T+SLI Sbjct: 289 DFKSTLSLI 297>NP_777582 Length = 580 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DLKGTMS 7 DLKGT++ Sbjct: 267 DLKGTLA 273>XP_006726821 Length = 408 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KGTMSL 8 KGTMSL Sbjct: 157 KGTMSL 162>XP_006726820 Length = 415 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KGTMSL 8 KGTMSL Sbjct: 285 KGTMSL 290>XP_006726819 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KGTMSL 8 KGTMSL Sbjct: 285 KGTMSL 290>XP_006726818 Length = 477 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KGTMSL 8 KGTMSL Sbjct: 263 KGTMSL 268Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KGTMSL 8 KGTMSL Sbjct: 369 KGTMSL 374>XP_006726817 Length = 477 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KGTMSL 8 KGTMSL Sbjct: 157 KGTMSL 162Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KGTMSL 8 KGTMSL Sbjct: 369 KGTMSL 374>XP_006726816 Length = 477 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KGTMSL 8 KGTMSL Sbjct: 157 KGTMSL 162>XP_006726815 Length = 477 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KGTMSL 8 KGTMSL Sbjct: 263 KGTMSL 268Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KGTMSL 8 KGTMSL Sbjct: 369 KGTMSL 374>XP_006726814 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KGTMSL 8 KGTMSL Sbjct: 285 KGTMSL 290>XP_006726813 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KGTMSL 8 KGTMSL Sbjct: 285 KGTMSL 290Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KGTMSL 8 KGTMSL Sbjct: 391 KGTMSL 396>XP_006726812 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KGTMSL 8 KGTMSL Sbjct: 285 KGTMSL 290Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KGTMSL 8 KGTMSL Sbjct: 391 KGTMSL 396>XP_006726811 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KGTMSL 8 KGTMSL Sbjct: 157 KGTMSL 162>XP_006726810 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KGTMSL 8 KGTMSL Sbjct: 157 KGTMSL 162>XP_006722325 Length = 408 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KGTMSL 8 KGTMSL Sbjct: 157 KGTMSL 162>XP_006716590 Length = 473 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DLKGTMS 7 DLKGT++ Sbjct: 160 DLKGTLA 166>XP_006716589 Length = 568 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DLKGTMS 7 DLKGT++ Sbjct: 267 DLKGTLA 273>XP_005269407 Length = 144 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LKGTMS 7 LKGTMS Sbjct: 31 LKGTMS 36>XP_006710099 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KGTMSL 8 KGTMSL Sbjct: 210 KGTMSL 215>NP_037506 Length = 868 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DLKGTMSLI 9 D GT+SLI Sbjct: 182 DTVGTLSLI 190>NP_001155901 Length = 873 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DLKGTMSLI 9 D GT+SLI Sbjct: 182 DTVGTLSLI 190>NP_001243121 Length = 271 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DLKGTMSLI 9 D GT+SLI Sbjct: 182 DTVGTLSLI 190>NP_057070 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DLKGTM 6 DLKGT+ Sbjct: 61 DLKGTL 66>XP_006722004 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DLKGTM 6 DLKGT+ Sbjct: 19 DLKGTL 24Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.138 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 422,563 Number of extensions: 481 Number of successful extensions: 41 Number of sequences better than 10000.0: 36 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |