Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 18 1482 XP_005262424 18 1482 NP_001185863 16 7355 NP_258261 16 7355 NP_002068 16 7355 NP_036237 16 7355 NP_060827 16 7355 NP_001273608 16 7355 NP_775919 16 7355 NP_620477 16 7355 NP_620476 16 7355 XP_005276185 16 7355 XP_006717126 16 7355 XP_005251986 16 7355 XP_006717125 16 7355 XP_006715303 16 7355 XP_006712503 16 7355 XP_005275932 16 7355 NP_055791 15 9605 NP_075561 15 9605 NP_001020365 15 9605 NP_001257 15 9605 NP_001020366 15 9605 NP_001296 15 9605 NP_001242953 15 9605 NP_001093252 15 9605 NP_001093251 15 9605 NP_004112 15 9605 NP_067049 15 9605 NP_001242955 15 9605 NP_001242954 15 9605 XP_005276924 15 9605 XP_005261616 15 9605 XP_005261615 15 9605 XP_005261614 15 9605 XP_005255831 15 9605 XP_006717997 15 9605 XP_005270071 15 9605 XP_005269704 15 9605 XP_006717206 15 9605 XP_005252108 15 9605 XP_006714553 15 9605 XP_005248407 15 9605 XP_005248406 15 9605 XP_005248404 15 9605 XP_005248403 15 9605 XP_006714552 15 9605 XP_005248402 15 9605 NP_005383 15 9605>NP_722576 Length = 3080 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 GLALAVLR 9 GLALAVLR Sbjct: 2563 GLALAVLR 2570>XP_005262424 Length = 2875 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 GLALAVLR 9 GLALAVLR Sbjct: 2358 GLALAVLR 2365>NP_001185863 Length = 1492 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GLALAVL 8 GLALA+L Sbjct: 883 GLALAIL 889>NP_258261 Length = 1464 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GLALAVL 8 GLALA+L Sbjct: 855 GLALAIL 861>NP_002068 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DGLALAVLR 9 +GLALA+ R Sbjct: 122 EGLALALAR 130>NP_036237 Length = 518 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DGLALAV 7 DGLALA+ Sbjct: 58 DGLALAL 64>NP_060827 Length = 491 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DGLALAVLR 9 DGL + VLR Sbjct: 462 DGLPVGVLR 470>NP_001273608 Length = 307 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DGLALAVLR 9 DGL + VLR Sbjct: 278 DGLPVGVLR 286>NP_775919 Length = 1530 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DGLALAVL 8 +GL+LAVL Sbjct: 382 EGLSLAVL 389>NP_620477 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DGLALAV 7 DGLALA+ Sbjct: 58 DGLALAL 64>NP_620476 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DGLALAV 7 DGLALA+ Sbjct: 58 DGLALAL 64>XP_005276185 Length = 116 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GLALAVLR 9 G+AL VLR Sbjct: 32 GMALTVLR 39>XP_006717126 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DGLALAVLR 9 +GLALA+ R Sbjct: 122 EGLALALAR 130>XP_005251986 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DGLALAVLR 9 +GLALA+ R Sbjct: 122 EGLALALAR 130>XP_006717125 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DGLALAVLR 9 +GLALA+ R Sbjct: 122 EGLALALAR 130>XP_006715303 Length = 1463 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GLALAVL 8 GLALA+L Sbjct: 883 GLALAIL 889>XP_006712503 Length = 1470 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DGLALAVL 8 +GL+LAVL Sbjct: 382 EGLSLAVL 389>XP_005275932 Length = 116 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GLALAVLR 9 G+AL VLR Sbjct: 32 GMALTVLR 39>NP_055791 Length = 1871 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DGLALAVL 8 DGL +AVL Sbjct: 649 DGLEVAVL 656>NP_075561 Length = 3197 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DGLALAV 7 DGL LAV Sbjct: 264 DGLTLAV 270>NP_001020365 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DGLALA 6 DGLALA Sbjct: 153 DGLALA 158>NP_001257 Length = 566 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DGLALA 6 DGLALA Sbjct: 153 DGLALA 158>NP_001020366 Length = 568 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DGLALA 6 DGLALA Sbjct: 154 DGLALA 159>NP_001296 Length = 209 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GLALAVL 8 G+ALAVL Sbjct: 10 GIALAVL 16>NP_001242953 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DGLALAVL 8 DG A+AVL Sbjct: 413 DGAAVAVL 420>NP_001093252 Length = 554 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GLALAVL 8 GLALAV+ Sbjct: 17 GLALAVI 23>NP_001093251 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GLALAVL 8 GLALAV+ Sbjct: 17 GLALAVI 23>NP_004112 Length = 586 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GLALAVL 8 GLALAV+ Sbjct: 17 GLALAVI 23>NP_067049 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DGLALAVL 8 DG A+AVL Sbjct: 397 DGAAVAVL 404>NP_001242955 Length = 608 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DGLALAVL 8 DG A+AVL Sbjct: 307 DGAAVAVL 314>NP_001242954 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DGLALAVL 8 DG A+AVL Sbjct: 403 DGAAVAVL 410>XP_005276924 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DGLALA 6 DGLALA Sbjct: 154 DGLALA 159>XP_005261616 Length = 586 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GLALAVL 8 GLALAV+ Sbjct: 17 GLALAVI 23>XP_005261615 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GLALAVL 8 GLALAV+ Sbjct: 17 GLALAVI 23>XP_005261614 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GLALAVL 8 GLALAV+ Sbjct: 17 GLALAVI 23>XP_005255831 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DGLALA 6 DGLALA Sbjct: 154 DGLALA 159>XP_006717997 Length = 608 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DGLALAVL 8 DG A+AVL Sbjct: 307 DGAAVAVL 314>XP_005270071 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DGLALAVL 8 DG A+AVL Sbjct: 323 DGAAVAVL 330>XP_005269704 Length = 1872 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DGLALAVL 8 DGL +AVL Sbjct: 649 DGLEVAVL 656>XP_006717206 Length = 1062 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DGLALAV 7 DGL LAV Sbjct: 133 DGLGLAV 139>XP_005252108 Length = 1097 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DGLALAV 7 DGL LAV Sbjct: 133 DGLGLAV 139>XP_006714553 Length = 2792 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DGLALAV 7 DGL LAV Sbjct: 264 DGLTLAV 270>XP_005248407 Length = 3208 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DGLALAV 7 DGL LAV Sbjct: 264 DGLTLAV 270>XP_005248406 Length = 3214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DGLALAV 7 DGL LAV Sbjct: 264 DGLTLAV 270>XP_005248404 Length = 3250 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DGLALAV 7 DGL LAV Sbjct: 264 DGLTLAV 270>XP_005248403 Length = 3250 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DGLALAV 7 DGL LAV Sbjct: 264 DGLTLAV 270>XP_006714552 Length = 3251 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DGLALAV 7 DGL LAV Sbjct: 264 DGLTLAV 270>XP_005248402 Length = 3251 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DGLALAV 7 DGL LAV Sbjct: 264 DGLTLAV 270>NP_005383 Length = 1096 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DGLALAV 7 DGL LAV Sbjct: 133 DGLGLAV 139Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.149 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 309,684 Number of extensions: 649 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |