Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 19 869 XP_006718908 19 869 XP_005271621 19 869 XP_006718907 19 869 XP_006718906 19 869 XP_005271619 19 869 XP_005271618 19 869 NP_071349 17 4312 XP_005257625 17 4312 XP_005257624 17 4312 NP_149100 16 5631 NP_001193849 16 5631 XP_005264686 16 5631 NP_001136272 16 7355 NP_001264994 16 7355 NP_001264995 16 7355 NP_001264996 16 7355 NP_001264993 16 7355 NP_694997 16 7355 NP_055144 16 7355 XP_005273935 16 7355 XP_005273934 16 7355 XP_005273933 16 7355 XP_006718554 16 7355 XP_006718553 16 7355 XP_006718552 16 7355 XP_006715531 16 7355 XP_006715530 16 7355 NP_056529 15 9605 NP_001264671 15 9605 NP_063938 15 9605 XP_005264490 15 9605 YP_003024034 15 9605>NP_000042 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DGIMVKLFV 9 DGIMVKL V Sbjct: 1641 DGIMVKLVV 1649>XP_006718908 Length = 1708 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DGIMVKLFV 9 DGIMVKL V Sbjct: 293 DGIMVKLVV 301>XP_005271621 Length = 2708 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DGIMVKLFV 9 DGIMVKL V Sbjct: 1293 DGIMVKLVV 1301>XP_006718907 Length = 3050 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DGIMVKLFV 9 DGIMVKL V Sbjct: 1635 DGIMVKLVV 1643>XP_006718906 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DGIMVKLFV 9 DGIMVKL V Sbjct: 1641 DGIMVKLVV 1649>XP_005271619 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DGIMVKLFV 9 DGIMVKL V Sbjct: 1641 DGIMVKLVV 1649>XP_005271618 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DGIMVKLFV 9 DGIMVKL V Sbjct: 1641 DGIMVKLVV 1649>NP_071349 Length = 1292 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DGIMVKLF 8 +GIMVK F Sbjct: 971 EGIMVKTF 978>XP_005257625 Length = 1268 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DGIMVKLF 8 +GIMVK F Sbjct: 947 EGIMVKTF 954>XP_005257624 Length = 1293 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DGIMVKLF 8 +GIMVK F Sbjct: 972 EGIMVKTF 979>NP_149100 Length = 783 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIMVKLF 8 G+MVKL+ Sbjct: 693 GVMVKLY 699>NP_001193849 Length = 484 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DGIMVKLFV 9 DG+ +KLF+ Sbjct: 204 DGLTLKLFL 212>XP_005264686 Length = 703 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GIMVKLF 8 G+MVKL+ Sbjct: 613 GVMVKLY 619>NP_001136272 Length = 3144 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 DGIMVKLFV 9 DG ++LF+ Sbjct: 1931 DGFFIQLFI 1939>NP_001264994 Length = 906 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GIMVKLFV 9 GI+V LFV Sbjct: 603 GILVTLFV 610>NP_001264995 Length = 906 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GIMVKLFV 9 GI+V LFV Sbjct: 603 GILVTLFV 610>NP_001264996 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GIMVKLFV 9 GI+V LFV Sbjct: 603 GILVTLFV 610>NP_001264993 Length = 1194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GIMVKLFV 9 GI+V LFV Sbjct: 603 GILVTLFV 610>NP_694997 Length = 896 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DGIMVKLFV 9 +GI VK+F+ Sbjct: 212 EGISVKMFL 220>NP_055144 Length = 1401 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 GIMVKLF 8 G+++KLF Sbjct: 503 GVLIKLF 509>XP_005273935 Length = 897 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DGIMVKLFV 9 +GI VK+F+ Sbjct: 213 EGISVKMFL 221>XP_005273934 Length = 917 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DGIMVKLFV 9 +GI VK+F+ Sbjct: 212 EGISVKMFL 220>XP_005273933 Length = 918 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DGIMVKLFV 9 +GI VK+F+ Sbjct: 213 EGISVKMFL 221>XP_006718554 Length = 946 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DGIMVKLFV 9 +GI VK+F+ Sbjct: 262 EGISVKMFL 270>XP_006718553 Length = 947 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DGIMVKLFV 9 +GI VK+F+ Sbjct: 263 EGISVKMFL 271>XP_006718552 Length = 968 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DGIMVKLFV 9 +GI VK+F+ Sbjct: 263 EGISVKMFL 271>XP_006715531 Length = 1029 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GIMVKLFV 9 GI+V LFV Sbjct: 603 GILVTLFV 610>XP_006715530 Length = 906 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GIMVKLFV 9 GI+V LFV Sbjct: 603 GILVTLFV 610>NP_056529 Length = 103 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GIMVKLFV 9 G MVKL+V Sbjct: 21 GKMVKLYV 28>NP_001264671 Length = 437 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DGIMVKLF 8 DG+ VK F Sbjct: 409 DGLSVKFF 416>NP_063938 Length = 512 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DGIMVKLF 8 DG+ VK F Sbjct: 484 DGLSVKFF 491>XP_005264490 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DGIMVKLF 8 DG+ VK F Sbjct: 426 DGLSVKFF 433>YP_003024034 Length = 98 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DGIMVKLFV 9 +G+M+ LF+ Sbjct: 34 EGMMLSLFI 42Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.341 0.161 0.456 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 326,889 Number of extensions: 522 Number of successful extensions: 33 Number of sequences better than 10000.0: 33 Number of HSP's gapped: 33 Number of HSP's successfully gapped: 33 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |