Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 19 665 NP_000170 19 665 NP_001449 16 5631 NP_001120959 16 5631 NP_001273409 16 5631 NP_055598 16 5631 NP_001273408 16 5631 XP_006725628 16 5631 XP_006725627 16 5631 XP_006720851 16 5631 XP_005254865 16 5631 XP_006715973 16 5631 NP_073594 16 7355 NP_055121 16 7355 NP_803879 16 7355 NP_803881 16 7355 NP_001258992 16 7355 NP_110428 16 7355 NP_001229291 16 7355 NP_001258991 16 7355 NP_001092270 16 7355 NP_001258990 16 7355 XP_006724671 16 7355 XP_006724670 16 7355 XP_005247773 16 7355 XP_006713796 16 7355 XP_005247772 16 7355 XP_005247768 16 7355 XP_006713794 16 7355 XP_005247767 16 7355>NP_001268421 Length = 1230 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DANEASARA 9 DAN+ASARA Sbjct: 19 DANKASARA 27>NP_000170 Length = 1360 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DANEASARA 9 DAN+ASARA Sbjct: 19 DANKASARA 27>NP_001449 Length = 2725 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DANEASAR 8 DAN+ SAR Sbjct: 374 DANKVSAR 381>NP_001120959 Length = 2692 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DANEASAR 8 DAN+ SAR Sbjct: 374 DANKVSAR 381>NP_001273409 Length = 834 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DANEASA 7 DANEAS+ Sbjct: 344 DANEASS 350>NP_055598 Length = 1023 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DANEASA 7 DANEAS+ Sbjct: 533 DANEASS 539>NP_001273408 Length = 834 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DANEASA 7 DANEAS+ Sbjct: 344 DANEASS 350>XP_006725628 Length = 994 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DANEASA 7 DANEAS+ Sbjct: 504 DANEASS 510>XP_006725627 Length = 1023 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DANEASA 7 DANEAS+ Sbjct: 533 DANEASS 539>XP_006720851 Length = 834 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DANEASA 7 DANEAS+ Sbjct: 344 DANEASS 350>XP_005254865 Length = 994 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DANEASA 7 DANEAS+ Sbjct: 504 DANEASS 510>XP_006715973 Length = 2632 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DANEASAR 8 DAN+ SAR Sbjct: 374 DANKVSAR 381>NP_073594 Length = 912 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NEASARA 9 NEASAR+ Sbjct: 135 NEASARS 141>NP_055121 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DANEASARA 9 D N+ SARA Sbjct: 203 DPNKVSARA 211>NP_803879 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ANEASARA 9 ANE +ARA Sbjct: 97 ANETAARA 104>NP_803881 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ANEASARA 9 ANE +ARA Sbjct: 97 ANETAARA 104>NP_001258992 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ANEASARA 9 ANE +ARA Sbjct: 97 ANETAARA 104>NP_110428 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ANEASARA 9 ANE +ARA Sbjct: 97 ANETAARA 104>NP_001229291 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ANEASARA 9 ANE +ARA Sbjct: 97 ANETAARA 104>NP_001258991 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ANEASARA 9 ANE +ARA Sbjct: 97 ANETAARA 104>NP_001092270 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ANEASARA 9 ANE +ARA Sbjct: 97 ANETAARA 104>NP_001258990 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ANEASARA 9 ANE +ARA Sbjct: 97 ANETAARA 104>XP_006724671 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ANEASARA 9 ANE +ARA Sbjct: 97 ANETAARA 104>XP_006724670 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ANEASARA 9 ANE +ARA Sbjct: 97 ANETAARA 104>XP_005247773 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NEASARA 9 NEASAR+ Sbjct: 176 NEASARS 182>XP_006713796 Length = 651 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NEASARA 9 NEASAR+ Sbjct: 176 NEASARS 182>XP_005247772 Length = 700 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NEASARA 9 NEASAR+ Sbjct: 176 NEASARS 182>XP_005247768 Length = 794 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NEASARA 9 NEASAR+ Sbjct: 176 NEASARS 182>XP_006713794 Length = 810 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NEASARA 9 NEASAR+ Sbjct: 176 NEASARS 182>XP_005247767 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NEASARA 9 NEASAR+ Sbjct: 176 NEASARS 182Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.290 0.0987 0.230 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 258,847 Number of extensions: 122 Number of successful extensions: 30 Number of sequences better than 10000.0: 30 Number of HSP's gapped: 30 Number of HSP's successfully gapped: 30 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |