Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245200 19 665 NP_000240 19 665 NP_001161089 19 665 XP_005265218 19 665 NP_002079 17 3301 XP_006723233 17 3301 XP_006723232 17 3301 XP_005258879 17 3301 XP_005258878 17 3301 NP_001123608 17 4312 NP_065902 17 4312 NP_958934 17 4312 NP_001123610 17 4312 NP_001123609 17 4312 NP_005536 17 4312 NP_078966 16 5631 NP_061910 16 5631 NP_004915 16 7355 NP_001129494 16 7355 NP_001185896 16 7355 XP_005259339 16 7355 XP_005259338 16 7355 XP_006723469 16 7355 NP_001245210 15 9605 NP_000242 15 9605 NP_003208 15 9605 NP_001092046 15 9605 NP_001277403 15 9605 NP_055622 15 9605 NP_004845 15 9605 NP_073745 15 9605 NP_001252541 15 9605 NP_057368 15 9605 NP_996882 15 9605 XP_005269183 15 9605 XP_005271799 15 9605 XP_005271798 15 9605 XP_005271797 15 9605 XP_005271796 15 9605 XP_006719011 15 9605 XP_005264389 15 9605 NP_001073957 15 9605>NP_001245200 Length = 687 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DALASISHV 9 +ALASISHV Sbjct: 102 EALASISHV 110>NP_000240 Length = 756 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DALASISHV 9 +ALASISHV Sbjct: 102 EALASISHV 110>NP_001161089 Length = 658 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DALASISHV 9 +ALASISHV Sbjct: 4 EALASISHV 12>XP_005265218 Length = 687 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DALASISHV 9 +ALASISHV Sbjct: 102 EALASISHV 110>NP_002079 Length = 980 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DALASISHV 9 DA ASISH+ Sbjct: 217 DANASISHL 225>XP_006723233 Length = 912 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DALASISHV 9 DA ASISH+ Sbjct: 149 DANASISHL 157>XP_006723232 Length = 981 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DALASISHV 9 DA ASISH+ Sbjct: 217 DANASISHL 225>XP_005258879 Length = 942 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DALASISHV 9 DA ASISH+ Sbjct: 217 DANASISHL 225>XP_005258878 Length = 980 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DALASISHV 9 DA ASISH+ Sbjct: 217 DANASISHL 225>NP_001123608 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DALASISHV 9 DAL+++SH+ Sbjct: 168 DALSALSHL 176>NP_065902 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DALASISHV 9 DAL+++SH+ Sbjct: 168 DALSALSHL 176>NP_958934 Length = 428 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ALASISHV 9 ALAS+SH+ Sbjct: 93 ALASLSHL 100>NP_001123610 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DALASISHV 9 DAL+++SH+ Sbjct: 168 DALSALSHL 176>NP_001123609 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DALASISHV 9 DAL+++SH+ Sbjct: 168 DALSALSHL 176>NP_005536 Length = 428 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ALASISHV 9 ALAS+SH+ Sbjct: 93 ALASLSHL 100>NP_078966 Length = 14507 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 DALASIS 7 DALASIS Sbjct: 4576 DALASIS 4582>NP_061910 Length = 245 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALASISHV 9 ALA +SHV Sbjct: 169 ALADLSHV 176>NP_004915 Length = 911 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DALASISH 8 DAL S++H Sbjct: 503 DALGSLTH 510>NP_001129494 Length = 964 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ALASISH 8 +LASISH Sbjct: 12 SLASISH 18>NP_001185896 Length = 857 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ALASISH 8 +LASISH Sbjct: 12 SLASISH 18>XP_005259339 Length = 906 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DALASISH 8 DAL S++H Sbjct: 503 DALGSLTH 510>XP_005259338 Length = 906 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DALASISH 8 DAL S++H Sbjct: 503 DALGSLTH 510>XP_006723469 Length = 911 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DALASISH 8 DAL S++H Sbjct: 503 DALGSLTH 510>NP_001245210 Length = 868 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DALASISHV 9 DA+ S +HV Sbjct: 537 DAVVSFAHV 545>NP_000242 Length = 934 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DALASISHV 9 DA+ S +HV Sbjct: 603 DAVVSFAHV 611>NP_003208 Length = 237 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DALASISHV 9 DAL SH+ Sbjct: 11 DALLKFSHI 19>NP_001092046 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DALASISHV 9 DAL SH+ Sbjct: 69 DALLKFSHI 77>NP_001277403 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ASISHV 9 ASISHV Sbjct: 135 ASISHV 140>NP_055622 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ASISHV 9 ASISHV Sbjct: 135 ASISHV 140>NP_004845 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DALASISH 8 DAL ++SH Sbjct: 95 DALKNLSH 102>NP_073745 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DALASISH 8 D+ AS+SH Sbjct: 40 DSSASVSH 47>NP_001252541 Length = 2371 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LASISH 8 LASISH Sbjct: 970 LASISH 975>NP_057368 Length = 2376 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LASISH 8 LASISH Sbjct: 975 LASISH 980>NP_996882 Length = 1551 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LASISH 8 LASISH Sbjct: 975 LASISH 980>XP_005269183 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DALASISHV 9 DAL SH+ Sbjct: 69 DALLKFSHI 77>XP_005271799 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ASISHV 9 ASISHV Sbjct: 135 ASISHV 140>XP_005271798 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ASISHV 9 ASISHV Sbjct: 135 ASISHV 140>XP_005271797 Length = 643 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ASISHV 9 ASISHV Sbjct: 135 ASISHV 140>XP_005271796 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ASISHV 9 ASISHV Sbjct: 135 ASISHV 140>XP_006719011 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ASISHV 9 ASISHV Sbjct: 135 ASISHV 140>XP_005264389 Length = 921 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DALASISHV 9 DA+ S +HV Sbjct: 603 DAVVSFAHV 611>NP_001073957 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ALASISHV 9 ALAS+ H+ Sbjct: 177 ALASVGHL 184Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.122 0.311 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 407,912 Number of extensions: 581 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |