Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 19 665 NP_001035957 19 665 XP_006721990 19 665 XP_006721989 19 665 XP_005258041 19 665 XP_006721988 19 665 XP_006721987 19 665 XP_006721986 19 665 XP_005258040 19 665 XP_006721985 19 665 NP_060941 18 1935 NP_065883 17 3301 XP_006717971 17 3301 XP_005245423 17 3301 XP_005245425 17 3301 NP_004124 16 7355 NP_079408 16 7355 NP_056197 16 7355 NP_653226 16 7355 NP_075266 16 7355 NP_004449 16 7355 NP_055445 16 7355 NP_001138587 16 7355 XP_006724698 16 7355 XP_005262167 16 7355 XP_005262166 16 7355 XP_005262165 16 7355 XP_006722562 16 7355 XP_006722561 16 7355 XP_006722560 16 7355 XP_006722559 16 7355 XP_005266781 16 7355 XP_006722558 16 7355 XP_005266780 16 7355 XP_005266779 16 7355 XP_005255053 16 7355 XP_005267560 16 7355 XP_005267559 16 7355 XP_006716509 16 7355 XP_006714089 16 7355 XP_006714088 16 7355 XP_005262715 16 7355 XP_006711799 16 7355 NP_060651 16 7355 NP_000262 15 9605 NP_003089 15 9605 NP_036385 15 9605 NP_001139406 15 9605 NP_001139405 15 9605 NP_570129 15 9605 NP_079384 15 9605 XP_005260574 15 9605 XP_006722542 15 9605 XP_005258336 15 9605 XP_005258335 15 9605 XP_005258334 15 9605 XP_006721018 15 9605 XP_006712321 15 9605>NP_000258 Length = 2818 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SKRLVFID 9 SKRLVFID Sbjct: 1682 SKRLVFID 1689>NP_001035957 Length = 2839 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SKRLVFID 9 SKRLVFID Sbjct: 1703 SKRLVFID 1710>XP_006721990 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SKRLVFID 9 SKRLVFID Sbjct: 1713 SKRLVFID 1720>XP_006721989 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SKRLVFID 9 SKRLVFID Sbjct: 1713 SKRLVFID 1720>XP_005258041 Length = 2836 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SKRLVFID 9 SKRLVFID Sbjct: 1682 SKRLVFID 1689>XP_006721988 Length = 2846 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SKRLVFID 9 SKRLVFID Sbjct: 1692 SKRLVFID 1699>XP_006721987 Length = 2849 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SKRLVFID 9 SKRLVFID Sbjct: 1713 SKRLVFID 1720>XP_006721986 Length = 2854 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SKRLVFID 9 SKRLVFID Sbjct: 1700 SKRLVFID 1707>XP_005258040 Length = 2857 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SKRLVFID 9 SKRLVFID Sbjct: 1703 SKRLVFID 1710>XP_006721985 Length = 2867 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SKRLVFID 9 SKRLVFID Sbjct: 1713 SKRLVFID 1720>NP_060941 Length = 426 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CSKRLVFID 9 C KR V+ID Sbjct: 131 CEKRSVYID 139>NP_065883 Length = 1237 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CSKRLVFID 9 C++RLVF + Sbjct: 566 CARRLVFFN 574>XP_006717971 Length = 559 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CSKRLVF 7 CS RLVF Sbjct: 546 CSSRLVF 552>XP_005245423 Length = 1246 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CSKRLVFID 9 C++RLVF + Sbjct: 575 CARRLVFFN 583>XP_005245425 Length = 1299 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CSKRLVFID 9 C++RLVF + Sbjct: 628 CARRLVFFN 636>NP_004124 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CSKRLVFID 9 C K +VF D Sbjct: 276 CLKAIVFFD 284>NP_079408 Length = 1342 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RLVFID 9 RLVFID Sbjct: 528 RLVFID 533>NP_056197 Length = 2610 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CSKRLVFID 9 C++R+V +D Sbjct: 88 CTRRIVGVD 96>NP_653226 Length = 1081 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 CSKRLVFI 8 C +RL+F+ Sbjct: 550 CLRRLIFL 557>NP_075266 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 CSKRLVFID 9 C K ++++D Sbjct: 221 CVKHIIYVD 229>NP_004449 Length = 670 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 CSKRLVFID 9 C K ++++D Sbjct: 180 CVKHIIYVD 188>NP_055445 Length = 1267 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CSKRLVFID 9 CSK L+F + Sbjct: 620 CSKTLLFFN 628>NP_001138587 Length = 358 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CSKRLVFID 9 C KR+ F D Sbjct: 128 CKKRVQFAD 136>XP_006724698 Length = 670 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 CSKRLVFID 9 C K ++++D Sbjct: 180 CVKHIIYVD 188>XP_005262167 Length = 670 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 CSKRLVFID 9 C K ++++D Sbjct: 180 CVKHIIYVD 188>XP_005262166 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 CSKRLVFID 9 C K ++++D Sbjct: 221 CVKHIIYVD 229>XP_005262165 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 CSKRLVFID 9 C K ++++D Sbjct: 221 CVKHIIYVD 229>XP_006722562 Length = 1060 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSKRLVF 7 C+K LVF Sbjct: 649 CTKNLVF 655>XP_006722561 Length = 1094 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSKRLVF 7 C+K LVF Sbjct: 649 CTKNLVF 655>XP_006722560 Length = 1295 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSKRLVF 7 C+K LVF Sbjct: 649 CTKNLVF 655>XP_006722559 Length = 1297 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSKRLVF 7 C+K LVF Sbjct: 649 CTKNLVF 655>XP_005266781 Length = 1301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSKRLVF 7 C+K LVF Sbjct: 649 CTKNLVF 655>XP_006722558 Length = 1301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSKRLVF 7 C+K LVF Sbjct: 649 CTKNLVF 655>XP_005266780 Length = 1301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSKRLVF 7 C+K LVF Sbjct: 649 CTKNLVF 655>XP_005266779 Length = 1301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSKRLVF 7 C+K LVF Sbjct: 649 CTKNLVF 655>XP_005255053 Length = 1267 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CSKRLVFID 9 CSK L+F + Sbjct: 620 CSKTLLFFN 628>XP_005267560 Length = 2563 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CSKRLVFID 9 C++R+V +D Sbjct: 88 CTRRIVGVD 96>XP_005267559 Length = 2610 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CSKRLVFID 9 C++R+V +D Sbjct: 88 CTRRIVGVD 96>XP_006716509 Length = 332 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CSKRLVFID 9 C K +VF D Sbjct: 163 CLKAIVFFD 171>XP_006714089 Length = 1281 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RLVFID 9 RLVFID Sbjct: 528 RLVFID 533>XP_006714088 Length = 1283 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RLVFID 9 RLVFID Sbjct: 469 RLVFID 474>XP_005262715 Length = 1320 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RLVFID 9 RLVFID Sbjct: 506 RLVFID 511>XP_006711799 Length = 1091 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 CSKRLVFI 8 C +RL+F+ Sbjct: 560 CLRRLIFL 567>NP_060651 Length = 1301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CSKRLVF 7 C+K LVF Sbjct: 649 CTKNLVF 655>NP_000262 Length = 1278 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CSKRLVFI 8 CS LVF+ Sbjct: 364 CSSGLVFV 371>NP_003089 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CSKRLVFI 8 C K +VFI Sbjct: 482 CPKTIVFI 489>NP_036385 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKRLVFID 9 +KRL F+D Sbjct: 83 AKRLSFVD 90>NP_001139406 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKRLVFID 9 +KRL F+D Sbjct: 27 AKRLSFVD 34>NP_001139405 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKRLVFID 9 +KRL F+D Sbjct: 77 AKRLSFVD 84>NP_570129 Length = 1306 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RLVFID 9 RL+FID Sbjct: 514 RLIFID 519>NP_079384 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CSKRLV 6 CS+RLV Sbjct: 6 CSRRLV 11>XP_005260574 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CSKRLVFI 8 C K +VFI Sbjct: 481 CPKTIVFI 488>XP_006722542 Length = 1273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CSKRLVFI 8 CS LVF+ Sbjct: 381 CSSGLVFV 388>XP_005258336 Length = 1286 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CSKRLVFI 8 CS LVF+ Sbjct: 364 CSSGLVFV 371>XP_005258335 Length = 1295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CSKRLVFI 8 CS LVF+ Sbjct: 381 CSSGLVFV 388>XP_005258334 Length = 1303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CSKRLVFI 8 CS LVF+ Sbjct: 381 CSSGLVFV 388>XP_006721018 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CSKRLV 6 CS+RLV Sbjct: 6 CSRRLV 11>XP_006712321 Length = 1307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RLVFID 9 RL+FID Sbjct: 515 RLIFID 520Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.343 0.152 0.494 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 518,195 Number of extensions: 1158 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |