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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_065681                                                              20     509
NP_066124                                                              20     509
XP_006717999                                                           20     509
NP_000827                                                              17    3301
NP_001265482                                                           17    4312
NP_001172001                                                           17    4312
NP_000826                                                              17    4312
NP_036261                                                              17    4312
XP_006721911                                                           17    4312
XP_006721910                                                           17    4312
XP_006721909                                                           17    4312
XP_006721908                                                           17    4312
NP_001172002                                                           17    4312
NP_003346                                                              16    7355
NP_001707                                                              15    9605
NP_116743                                                              15    9605
NP_073714                                                              15    9605
NP_001186948                                                           15    9605
NP_003347                                                              15    9605
NP_055495                                                              15    9605
NP_061956                                                              15    9605
NP_872588                                                              15    9605
NP_000904                                                              15    9605
XP_006723863                                                           15    9605
XP_005260263                                                           15    9605
XP_006723862                                                           15    9605
XP_006722261                                                           15    9605
XP_005258130                                                           15    9605
XP_005271002                                                           15    9605

>NP_065681
          Length = 1072

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   CRTVIAATV 9
           CRTVIAA V
Sbjct: 634 CRTVIAAAV 642



>NP_066124
          Length = 1114

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   CRTVIAATV 9
           CRTVIAA V
Sbjct: 634 CRTVIAAAV 642



>XP_006717999
          Length = 1207

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   CRTVIAATV 9
           CRTVIAA V
Sbjct: 727 CRTVIAAAV 735



>NP_000827
          Length = 1336

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   CRTVIAATV 9
           C TV+A TV
Sbjct: 593 CLTVVAVTV 601



>NP_001265482
          Length = 873

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   CRTVIAATV 9
           C TV+A TV
Sbjct: 563 CLTVVAITV 571



>NP_001172001
          Length = 244

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1  CRTVIAATV 9
          CR V AATV
Sbjct: 3  CRDVHAATV 11



>NP_000826
          Length = 1233

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   CRTVIAATV 9
           C TV+A TV
Sbjct: 563 CLTVVAITV 571



>NP_036261
          Length = 244

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1  CRTVIAATV 9
          CR V AATV
Sbjct: 3  CRDVHAATV 11



>XP_006721911
          Length = 1297

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   CRTVIAATV 9
           C TV+A TV
Sbjct: 627 CLTVVAITV 635



>XP_006721910
          Length = 1306

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   CRTVIAATV 9
           C TV+A TV
Sbjct: 638 CLTVVAITV 646



>XP_006721909
          Length = 1307

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   CRTVIAATV 9
           C TV+A TV
Sbjct: 637 CLTVVAITV 645



>XP_006721908
          Length = 1308

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   CRTVIAATV 9
           C TV+A TV
Sbjct: 638 CLTVVAITV 646



>NP_001172002
          Length = 244

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1  CRTVIAATV 9
          CR V AATV
Sbjct: 3  CRDVHAATV 11



>NP_003346
          Length = 309

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   CRTVIAATV 9
           C TVIA+ V
Sbjct: 227 CTTVIASPV 235



>NP_001707
          Length = 372

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   CRTVIA 6
           C+TVIA
Sbjct: 122 CKTVIA 127



>NP_116743
          Length = 327

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1  CRTVIA 6
          C+TVIA
Sbjct: 77 CKTVIA 82



>NP_073714
          Length = 275

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   CRTVIAATV 9
           C TV+A+ V
Sbjct: 230 CATVVASPV 238



>NP_001186948
          Length = 370

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   CRTVIA 6
           C+TVIA
Sbjct: 123 CKTVIA 128



>NP_003347
          Length = 312

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   CRTVIAATV 9
           C TV+A+ V
Sbjct: 230 CATVVASPV 238



>NP_055495
          Length = 2235

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   CRTVIAATV 9
           CR ++ ATV
Sbjct: 688 CRDLLRATV 696



>NP_061956
          Length = 481

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  CRTVIAA 7
          CR V+AA
Sbjct: 30 CRMVVAA 36



>NP_872588
          Length = 370

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   CRTVIA 6
           C+TVIA
Sbjct: 123 CKTVIA 128



>NP_000904
          Length = 370

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   CRTVIA 6
           C+TVIA
Sbjct: 123 CKTVIA 128



>XP_006723863
          Length = 289

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1  CRTVIA 6
          C+TVIA
Sbjct: 42 CKTVIA 47



>XP_005260263
          Length = 365

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   CRTVIA 6
           C+TVIA
Sbjct: 118 CKTVIA 123



>XP_006723862
          Length = 370

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   CRTVIA 6
           C+TVIA
Sbjct: 123 CKTVIA 128



>XP_006722261
          Length = 2092

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   CRTVIAATV 9
           CR ++ ATV
Sbjct: 545 CRDLLRATV 553



>XP_005258130
          Length = 2234

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   CRTVIAATV 9
           CR ++ ATV
Sbjct: 688 CRDLLRATV 696



>XP_005271002
          Length = 467

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  CRTVIAA 7
          CR V+AA
Sbjct: 30 CRMVVAA 36



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.338    0.130    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 290,766
Number of extensions: 185
Number of successful extensions: 29
Number of sequences better than 10000.0: 29
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 29
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.6 bits)
S2: 28 (15.4 bits)