Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 20 390 XP_005265800 20 390 XP_006714103 20 390 XP_006714102 20 390 NP_005624 17 3301 NP_001005619 17 3301 NP_001005731 17 3301 NP_000204 17 3301 NP_000244 17 3301 XP_005257369 17 3301 XP_005257368 17 3301 XP_006721933 17 3301 XP_006721931 17 3301 XP_006721930 17 3301 XP_005257366 17 3301 XP_006721929 17 3301 XP_005263082 17 3301 XP_005264572 17 3301 NP_001193972 17 3301 NP_001182131 17 4312 NP_001001924 16 5631 NP_001001925 16 5631 NP_997297 16 5631 XP_005273640 16 5631 XP_005273639 16 5631 XP_005273638 16 5631 XP_005273637 16 5631 XP_005273636 16 5631 XP_005273635 16 5631 XP_005273634 16 5631 NP_037371 16 7355 NP_001252 16 7355 NP_115942 16 7355 XP_006725715 16 7355 XP_006725714 16 7355 XP_006725713 16 7355 XP_006725712 16 7355 XP_006725479 16 7355 XP_006725478 16 7355 XP_006725477 16 7355 XP_006725476 16 7355 XP_005274834 16 7355 XP_006724926 16 7355 XP_005274833 16 7355 XP_005274485 16 7355 XP_006724505 16 7355 XP_005274484 16 7355 NP_006242 15 9605 NP_996790 15 9605 NP_871626 15 9605 NP_940953 15 9605 NP_001167014 15 9605 NP_003105 15 9605 NP_002709 15 9605 NP_757367 15 9605 NP_001167012 15 9605 NP_001177376 15 9605 NP_001167010 15 9605 NP_060339 15 9605 NP_524576 15 9605 NP_001167011 15 9605 NP_001167013 15 9605 XP_006721285 15 9605 XP_006721284 15 9605 XP_006721283 15 9605 XP_005256066 15 9605 XP_006721282 15 9605 XP_006721281 15 9605 XP_006721280 15 9605 XP_006721279 15 9605 XP_006721278 15 9605 XP_006721277 15 9605 XP_005256065 15 9605 XP_006721276 15 9605 XP_006716683 15 9605 XP_006716682 15 9605 XP_006714545 15 9605 XP_006714544 15 9605 XP_006713749 15 9605 XP_005273179 15 9605 XP_005273178 15 9605>NP_006197 Length = 1089 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MRVDSDNA 9 MRVDSDNA Sbjct: 980 MRVDSDNA 987>XP_005265800 Length = 1089 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MRVDSDNA 9 MRVDSDNA Sbjct: 980 MRVDSDNA 987>XP_006714103 Length = 1111 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MRVDSDNA 9 MRVDSDNA Sbjct: 1002 MRVDSDNA 1009>XP_006714102 Length = 1114 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MRVDSDNA 9 MRVDSDNA Sbjct: 1005 MRVDSDNA 1012>NP_005624 Length = 1333 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 CMRVDSD 7 C+RV+SD Sbjct: 980 CLRVESD 986>NP_001005619 Length = 1805 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+RVD D A Sbjct: 41 CVRVDKDCA 49>NP_001005731 Length = 1752 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+RVD D A Sbjct: 41 CVRVDKDCA 49>NP_000204 Length = 1822 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+RVD D A Sbjct: 41 CVRVDKDCA 49>NP_000244 Length = 894 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 CM++D D A Sbjct: 827 CMQMDKDEA 835>XP_005257369 Length = 1752 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+RVD D A Sbjct: 41 CVRVDKDCA 49>XP_005257368 Length = 1875 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+RVD D A Sbjct: 41 CVRVDKDCA 49>XP_006721933 Length = 1787 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+RVD D A Sbjct: 76 CVRVDKDCA 84>XP_006721931 Length = 1840 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+RVD D A Sbjct: 76 CVRVDKDCA 84>XP_006721930 Length = 1857 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+RVD D A Sbjct: 76 CVRVDKDCA 84>XP_005257366 Length = 1875 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+RVD D A Sbjct: 41 CVRVDKDCA 49>XP_006721929 Length = 1910 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+RVD D A Sbjct: 76 CVRVDKDCA 84>XP_005263082 Length = 921 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 CM++D D A Sbjct: 854 CMQMDKDEA 862>XP_005264572 Length = 1318 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 CMRVDSD 7 C+RV+SD Sbjct: 980 CLRVESD 986>NP_001193972 Length = 189 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 CMRVDSD 7 C+R+DSD Sbjct: 132 CVRLDSD 138>NP_001182131 Length = 137 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MRVDSDN 8 MRVDSD+ Sbjct: 108 MRVDSDS 114>NP_001001924 Length = 1270 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 CMRVDSDN 8 C+R +SDN Sbjct: 735 CLRRNSDN 742>NP_001001925 Length = 1216 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 CMRVDSDN 8 C+R +SDN Sbjct: 735 CLRRNSDN 742>NP_997297 Length = 1318 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 CM+V D+A Sbjct: 41 CMKVHQDSA 49>XP_005273640 Length = 969 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 CMRVDSDN 8 C+R +SDN Sbjct: 735 CLRRNSDN 742>XP_005273639 Length = 1216 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 CMRVDSDN 8 C+R +SDN Sbjct: 735 CLRRNSDN 742>XP_005273638 Length = 1228 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 CMRVDSDN 8 C+R +SDN Sbjct: 735 CLRRNSDN 742>XP_005273637 Length = 1228 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 CMRVDSDN 8 C+R +SDN Sbjct: 735 CLRRNSDN 742>XP_005273636 Length = 1270 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 CMRVDSDN 8 C+R +SDN Sbjct: 735 CLRRNSDN 742>XP_005273635 Length = 1282 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 CMRVDSDN 8 C+R +SDN Sbjct: 735 CLRRNSDN 742>XP_005273634 Length = 1282 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 CMRVDSDN 8 C+R +SDN Sbjct: 735 CLRRNSDN 742>NP_037371 Length = 575 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CMRVDSDNA 9 CM +D D A Sbjct: 399 CMDLDGDGA 407>NP_001252 Length = 372 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RVDSDNA 9 R+DSD+A Sbjct: 303 RIDSDDA 309>NP_115942 Length = 333 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 CMRVDSDN 8 C R D DN Sbjct: 7 CTRPDGDN 14>XP_006725715 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CMRVDSDNA 9 CM +D D A Sbjct: 238 CMDLDGDGA 246>XP_006725714 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CMRVDSDNA 9 CM +D D A Sbjct: 238 CMDLDGDGA 246>XP_006725713 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CMRVDSDNA 9 CM +D D A Sbjct: 333 CMDLDGDGA 341>XP_006725712 Length = 575 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CMRVDSDNA 9 CM +D D A Sbjct: 399 CMDLDGDGA 407>XP_006725479 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CMRVDSDNA 9 CM +D D A Sbjct: 238 CMDLDGDGA 246>XP_006725478 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CMRVDSDNA 9 CM +D D A Sbjct: 238 CMDLDGDGA 246>XP_006725477 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CMRVDSDNA 9 CM +D D A Sbjct: 333 CMDLDGDGA 341>XP_006725476 Length = 575 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CMRVDSDNA 9 CM +D D A Sbjct: 399 CMDLDGDGA 407>XP_005274834 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CMRVDSDNA 9 CM +D D A Sbjct: 238 CMDLDGDGA 246>XP_006724926 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CMRVDSDNA 9 CM +D D A Sbjct: 238 CMDLDGDGA 246>XP_005274833 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CMRVDSDNA 9 CM +D D A Sbjct: 333 CMDLDGDGA 341>XP_005274485 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CMRVDSDNA 9 CM +D D A Sbjct: 238 CMDLDGDGA 246>XP_006724505 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CMRVDSDNA 9 CM +D D A Sbjct: 238 CMDLDGDGA 246>XP_005274484 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CMRVDSDNA 9 CM +D D A Sbjct: 333 CMDLDGDGA 341>NP_006242 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 CMRVDSD 7 C R DSD Sbjct: 503 CQRSDSD 509>NP_996790 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 CMRVDSD 7 C R DSD Sbjct: 518 CQRSDSD 524>NP_871626 Length = 529 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 CMRVDSD 7 CM VD D Sbjct: 362 CMDVDGD 368>NP_940953 Length = 1907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CMRVDSDNA 9 C RV +NA Sbjct: 1346 CHRVQEENA 1354>NP_001167014 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+R+DS A Sbjct: 57 CLRLDSIEA 65>NP_003105 Length = 926 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 6/7 (85%) Query: 1 CMRVDSD 7 C+++D D Sbjct: 170 CLKIDED 176>NP_002709 Length = 1150 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 CMRVDSD 7 CM VD D Sbjct: 983 CMDVDGD 989>NP_757367 Length = 926 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 6/7 (85%) Query: 1 CMRVDSD 7 C+++D D Sbjct: 170 CLKIDED 176>NP_001167012 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+R+DS A Sbjct: 65 CLRLDSIEA 73>NP_001177376 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 CMRVDSD 7 CM VD D Sbjct: 247 CMDVDGD 253>NP_001167010 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+R+DS A Sbjct: 65 CLRLDSIEA 73>NP_060339 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+R+DS A Sbjct: 65 CLRLDSIEA 73>NP_524576 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+R+DS A Sbjct: 65 CLRLDSIEA 73>NP_001167011 Length = 497 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+R+DS A Sbjct: 71 CLRLDSIEA 79>NP_001167013 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+R+DS A Sbjct: 65 CLRLDSIEA 73>XP_006721285 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+R+DS A Sbjct: 71 CLRLDSIEA 79>XP_006721284 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+R+DS A Sbjct: 71 CLRLDSIEA 79>XP_006721283 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+R+DS A Sbjct: 65 CLRLDSIEA 73>XP_005256066 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+R+DS A Sbjct: 65 CLRLDSIEA 73>XP_006721282 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+R+DS A Sbjct: 71 CLRLDSIEA 79>XP_006721281 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+R+DS A Sbjct: 71 CLRLDSIEA 79>XP_006721280 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+R+DS A Sbjct: 71 CLRLDSIEA 79>XP_006721279 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+R+DS A Sbjct: 71 CLRLDSIEA 79>XP_006721278 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+R+DS A Sbjct: 71 CLRLDSIEA 79>XP_006721277 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+R+DS A Sbjct: 71 CLRLDSIEA 79>XP_005256065 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+R+DS A Sbjct: 71 CLRLDSIEA 79>XP_006721276 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CMRVDSDNA 9 C+R+DS A Sbjct: 71 CLRLDSIEA 79>XP_006716683 Length = 884 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 6/7 (85%) Query: 1 CMRVDSD 7 C+++D D Sbjct: 128 CLKIDED 134>XP_006716682 Length = 926 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 6/7 (85%) Query: 1 CMRVDSD 7 C+++D D Sbjct: 170 CLKIDED 176>XP_006714545 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 CMRVDSD 7 C R DSD Sbjct: 245 CQRSDSD 251>XP_006714544 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 CMRVDSD 7 C R DSD Sbjct: 402 CQRSDSD 408>XP_006713749 Length = 1150 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 CMRVDSD 7 CM VD D Sbjct: 983 CMDVDGD 989>XP_005273179 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CMRVDSDNA 9 C RV +NA Sbjct: 224 CHRVQEENA 232>XP_005273178 Length = 1931 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CMRVDSDNA 9 C RV +NA Sbjct: 1346 CHRVQEENA 1354Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.127 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 599,961 Number of extensions: 1072 Number of successful extensions: 81 Number of sequences better than 10000.0: 81 Number of HSP's gapped: 81 Number of HSP's successfully gapped: 81 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |