Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 22 134 XP_005266703 22 134 NP_001028752 17 2528 NP_079385 17 2528 NP_001157207 17 2528 XP_006725416 17 2528 XP_006725415 17 2528 XP_006725414 17 2528 XP_006722172 17 2528 XP_006722171 17 2528 XP_006722170 17 2528 NP_037506 17 4312 NP_001155901 17 4312 NP_001804 16 5631 NP_001273663 16 5631 NP_001070731 16 5631 NP_588613 16 5631 NP_001008738 16 5631 NP_001193719 16 5631 NP_001231924 16 5631 NP_001193718 16 5631 NP_000123 16 7355 NP_001074299 16 7355 NP_078772 16 7355 NP_057081 16 7355 XP_005245292 16 7355 XP_005245291 16 7355 NP_001243599 15 9605 NP_569710 15 9605 NP_005691 15 9605 NP_065188 15 9605 NP_001027566 15 9605 NP_001027567 15 9605 NP_940971 15 9605 NP_116212 15 9605 NP_036434 15 9605 NP_001180258 15 9605 XP_006717369 15 9605 XP_005267118 15 9605 XP_006715581 15 9605 XP_006715580 15 9605 XP_006715579 15 9605 XP_005270731 15 9605 XP_005270730 15 9605 XP_006710560 15 9605 XP_006710559 15 9605 XP_006710558 15 9605 XP_006710557 15 9605 XP_006710556 15 9605 XP_006710555 15 9605 XP_005270727 15 9605 XP_006710554 15 9605 XP_005270725 15 9605 XP_005270724 15 9605 XP_006710553 15 9605 XP_005270723 15 9605 XP_006710552 15 9605 XP_006710551 15 9605 XP_006710550 15 9605 XP_006710549 15 9605 XP_006710548 15 9605>NP_443179 Length = 2170 Score = 21.6 bits (44), Expect = 134 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 CFQATRET 8 CFQATRET Sbjct: 998 CFQATRET 1005>XP_005266703 Length = 1501 Score = 21.6 bits (44), Expect = 134 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 CFQATRET 8 CFQATRET Sbjct: 329 CFQATRET 336>NP_001028752 Length = 317 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CFQATRETV 9 CF+ TRE + Sbjct: 275 CFEVTREAM 283>NP_079385 Length = 770 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CFQATRETV 9 CF+ TRE + Sbjct: 275 CFEVTREAM 283>NP_001157207 Length = 970 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CFQATRETV 9 CF+ TRE + Sbjct: 275 CFEVTREAM 283>XP_006725416 Length = 808 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CFQATRETV 9 CF+ TRE + Sbjct: 113 CFEVTREAM 121>XP_006725415 Length = 990 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CFQATRETV 9 CF+ TRE + Sbjct: 275 CFEVTREAM 283>XP_006725414 Length = 1034 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CFQATRETV 9 CF+ TRE + Sbjct: 275 CFEVTREAM 283>XP_006722172 Length = 808 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CFQATRETV 9 CF+ TRE + Sbjct: 113 CFEVTREAM 121>XP_006722171 Length = 972 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CFQATRETV 9 CF+ TRE + Sbjct: 275 CFEVTREAM 283>XP_006722170 Length = 1016 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CFQATRETV 9 CF+ TRE + Sbjct: 275 CFEVTREAM 283>NP_037506 Length = 868 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CFQATRETV 9 C+Q+ R+T+ Sbjct: 512 CYQSHRDTI 520>NP_001155901 Length = 873 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CFQATRETV 9 C+Q+ R+T+ Sbjct: 517 CYQSHRDTI 525>NP_001804 Length = 2701 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CFQATRETV 9 C + T+ET+ Sbjct: 2431 CLEKTKETI 2439>NP_001273663 Length = 2580 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CFQATRETV 9 C + T+ET+ Sbjct: 2310 CLEKTKETI 2318>NP_001070731 Length = 567 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CFQATRETV 9 CF TRE V Sbjct: 367 CFFVTREKV 375>NP_588613 Length = 1166 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CFQATRETV 9 CF A ETV Sbjct: 673 CFDAKLETV 681>NP_001008738 Length = 1138 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CFQATRETV 9 CF A ETV Sbjct: 645 CFDAKLETV 653>NP_001193719 Length = 491 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CFQATRETV 9 CF TRE V Sbjct: 367 CFFVTREKV 375>NP_001231924 Length = 563 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CFQATRETV 9 CF TRE V Sbjct: 367 CFFVTREKV 375>NP_001193718 Length = 532 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CFQATRETV 9 CF TRE V Sbjct: 332 CFFVTREKV 340>NP_000123 Length = 2351 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CFQATR 6 CF ATR Sbjct: 17 CFSATR 22>NP_001074299 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CFQATRETV 9 C QA ETV Sbjct: 289 CLQAPLETV 297>NP_078772 Length = 796 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CFQATRETV 9 CF +RE++ Sbjct: 739 CFPCSRESI 747>NP_057081 Length = 475 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CFQATRETV 9 C++A ETV Sbjct: 340 CYRAALETV 348>XP_005245292 Length = 405 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CFQATRETV 9 C++A ETV Sbjct: 270 CYRAALETV 278>XP_005245291 Length = 443 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CFQATRETV 9 C++A ETV Sbjct: 340 CYRAALETV 348>NP_001243599 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CFQATRETV 9 CF R+TV Sbjct: 624 CFLTLRDTV 632>NP_569710 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CFQATRETV 9 CF R+TV Sbjct: 654 CFLTLRDTV 662>NP_005691 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CFQATRETV 9 CF R+TV Sbjct: 654 CFLTLRDTV 662>NP_065188 Length = 1221 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 CFQATR 6 CF+AT+ Sbjct: 186 CFEATK 191>NP_001027566 Length = 1193 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 CFQATR 6 CF+AT+ Sbjct: 186 CFEATK 191>NP_001027567 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 CFQATR 6 CF+AT+ Sbjct: 186 CFEATK 191>NP_940971 Length = 1250 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 CFQATR 6 CF+AT+ Sbjct: 186 CFEATK 191>NP_116212 Length = 720 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 CFQATRE 7 CF+ T+E Sbjct: 699 CFERTKE 705>NP_036434 Length = 1403 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQATRETV 9 F+AT ETV Sbjct: 298 FEATWETV 305>NP_001180258 Length = 819 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 CFQATRE 7 CF+ T+E Sbjct: 798 CFERTKE 804>XP_006717369 Length = 819 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 CFQATRE 7 CF+ T+E Sbjct: 798 CFERTKE 804>XP_005267118 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 CFQATR 6 CF+AT+ Sbjct: 187 CFEATK 192>XP_006715581 Length = 1223 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 CFQATR 6 CF+AT+ Sbjct: 187 CFEATK 192>XP_006715580 Length = 1249 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 CFQATR 6 CF+AT+ Sbjct: 185 CFEATK 190>XP_006715579 Length = 1251 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 CFQATR 6 CF+AT+ Sbjct: 187 CFEATK 192>XP_005270731 Length = 1177 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQATRETV 9 F+AT ETV Sbjct: 298 FEATWETV 305>XP_005270730 Length = 1177 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQATRETV 9 F+AT ETV Sbjct: 298 FEATWETV 305>XP_006710560 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQATRETV 9 F+AT ETV Sbjct: 303 FEATWETV 310>XP_006710559 Length = 1188 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQATRETV 9 F+AT ETV Sbjct: 303 FEATWETV 310>XP_006710558 Length = 1191 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQATRETV 9 F+AT ETV Sbjct: 303 FEATWETV 310>XP_006710557 Length = 1191 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQATRETV 9 F+AT ETV Sbjct: 303 FEATWETV 310>XP_006710556 Length = 1195 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQATRETV 9 F+AT ETV Sbjct: 303 FEATWETV 310>XP_006710555 Length = 1403 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQATRETV 9 F+AT ETV Sbjct: 298 FEATWETV 305>XP_005270727 Length = 1403 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQATRETV 9 F+AT ETV Sbjct: 298 FEATWETV 305>XP_006710554 Length = 1421 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQATRETV 9 F+AT ETV Sbjct: 303 FEATWETV 310>XP_005270725 Length = 1446 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQATRETV 9 F+AT ETV Sbjct: 298 FEATWETV 305>XP_005270724 Length = 1446 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQATRETV 9 F+AT ETV Sbjct: 298 FEATWETV 305>XP_006710553 Length = 1451 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQATRETV 9 F+AT ETV Sbjct: 303 FEATWETV 310>XP_005270723 Length = 1459 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQATRETV 9 F+AT ETV Sbjct: 298 FEATWETV 305>XP_006710552 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQATRETV 9 F+AT ETV Sbjct: 303 FEATWETV 310>XP_006710551 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQATRETV 9 F+AT ETV Sbjct: 303 FEATWETV 310>XP_006710550 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQATRETV 9 F+AT ETV Sbjct: 303 FEATWETV 310>XP_006710549 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQATRETV 9 F+AT ETV Sbjct: 303 FEATWETV 310>XP_006710548 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FQATRETV 9 F+AT ETV Sbjct: 303 FEATWETV 310Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.128 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 390,512 Number of extensions: 736 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |