Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 21 175 XP_006714104 21 175 XP_005265800 21 175 XP_006714103 21 175 XP_006714102 21 175 NP_057735 18 1935 XP_006720230 18 1935 XP_006720229 18 1935 NP_001072988 18 1935 NP_006816 17 2528 NP_000386 17 4312 XP_005261397 17 4312 XP_006710230 16 5631 NP_001265546 16 7355 NP_001265545 16 7355 NP_001138619 16 7355 NP_005934 16 7355 NP_001138618 16 7355 NP_001138620 16 7355 NP_004327 16 7355 NP_001243228 16 7355 NP_004373 16 7355 NP_001068566 16 7355 NP_003622 15 9605 NP_004345 15 9605 NP_079284 15 9605 NP_694540 15 9605 NP_061905 15 9605 NP_001275537 15 9605 NP_001275536 15 9605 NP_003493 15 9605 NP_851393 15 9605 NP_073622 15 9605 NP_001137450 15 9605 NP_055906 15 9605 NP_543137 15 9605 NP_001265552 15 9605 NP_872393 15 9605 NP_001265553 15 9605 XP_006724359 15 9605 XP_005261762 15 9605 XP_005261761 15 9605 XP_005255730 15 9605 XP_005255666 15 9605 XP_005255665 15 9605 XP_005255664 15 9605 XP_006720146 15 9605 XP_005267508 15 9605 XP_006716171 15 9605 XP_006716170 15 9605 XP_006712515 15 9605 XP_006712514 15 9605 XP_006712513 15 9605 XP_006712512 15 9605 XP_006712511 15 9605 XP_006712510 15 9605 XP_006712509 15 9605 XP_005246533 15 9605 XP_006712508 15 9605 XP_006711452 15 9605 NP_942153 15 9605 NP_115893 15 9605 NP_776159 15 9605 NP_116204 15 9605>NP_006197 Length = 1089 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 CFGESEVS 8 CFGESEVS Sbjct: 49 CFGESEVS 56>XP_006714104 Length = 832 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 CFGESEVS 8 CFGESEVS Sbjct: 74 CFGESEVS 81>XP_005265800 Length = 1089 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 CFGESEVS 8 CFGESEVS Sbjct: 49 CFGESEVS 56>XP_006714103 Length = 1111 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 CFGESEVS 8 CFGESEVS Sbjct: 71 CFGESEVS 78>XP_006714102 Length = 1114 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 CFGESEVS 8 CFGESEVS Sbjct: 74 CFGESEVS 81>NP_057735 Length = 836 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 CFGESEVS 8 CFG+SE S Sbjct: 753 CFGDSESS 760>XP_006720230 Length = 555 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 CFGESEVS 8 CFG+SE S Sbjct: 472 CFGDSESS 479>XP_006720229 Length = 747 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 CFGESEVS 8 CFG+SE S Sbjct: 664 CFGDSESS 671>NP_001072988 Length = 799 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 CFGESEVS 8 CFG+SE S Sbjct: 716 CFGDSESS 723>NP_006816 Length = 602 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GESEVSR 9 GESEVSR Sbjct: 193 GESEVSR 199>NP_000386 Length = 897 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FGESEVS 8 FG+SEVS Sbjct: 529 FGDSEVS 535>XP_005261397 Length = 903 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FGESEVS 8 FG+SEVS Sbjct: 535 FGDSEVS 541>XP_006710230 Length = 332 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FGESEVS 8 FGE EVS Sbjct: 178 FGEKEVS 184>NP_001265546 Length = 1028 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FGESEVSR 9 FGE VSR Sbjct: 553 FGERSVSR 560>NP_001265545 Length = 1065 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FGESEVSR 9 FGE VSR Sbjct: 533 FGERSVSR 540>NP_001138619 Length = 375 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GESEVSR 9 GE EVSR Sbjct: 295 GEDEVSR 301>NP_005934 Length = 385 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FGESEVS 8 FG SEVS Sbjct: 331 FGNSEVS 337>NP_001138618 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GESEVSR 9 GE EVSR Sbjct: 364 GEDEVSR 370>NP_001138620 Length = 401 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GESEVSR 9 GE EVSR Sbjct: 335 GEDEVSR 341>NP_004327 Length = 1085 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FGESEVSR 9 FGE VSR Sbjct: 553 FGERSVSR 560>NP_001243228 Length = 240 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GESEVSR 9 GE EVSR Sbjct: 160 GEDEVSR 166>NP_004373 Length = 415 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GESEVSR 9 GE EVSR Sbjct: 335 GEDEVSR 341>NP_001068566 Length = 385 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FGESEVS 8 FG SEVS Sbjct: 331 FGNSEVS 337>NP_003622 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FGESEVSR 9 FG+SE+ R Sbjct: 902 FGDSELMR 909>NP_004345 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CFGESE 6 CF ESE Sbjct: 298 CFDESE 303>NP_079284 Length = 877 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CFGESEVSR 9 C GESE R Sbjct: 364 CSGESEQLR 372>NP_694540 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CFGESEVS 8 C G+ EVS Sbjct: 641 CLGKHEVS 648>NP_061905 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CFGESEVSR 9 C GESE R Sbjct: 364 CSGESEQLR 372>NP_001275537 Length = 1097 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CFGESEVSR 9 C GESE R Sbjct: 364 CSGESEQLR 372>NP_001275536 Length = 1035 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CFGESEVSR 9 C GESE R Sbjct: 364 CSGESEQLR 372>NP_003493 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GESEVSR 9 GE E+SR Sbjct: 639 GEKEISR 645>NP_851393 Length = 826 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GESEVSR 9 GE E+SR Sbjct: 639 GEKEISR 645>NP_073622 Length = 1501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 CFGESEVS 8 C G EVS Sbjct: 248 CMGNQEVS 255>NP_001137450 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FGESEVS 8 FGESE S Sbjct: 121 FGESESS 127>NP_055906 Length = 1720 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 CFGESEVSR 9 CF VSR Sbjct: 707 CFSRKRVSR 715>NP_543137 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CFGESEVS 8 C G+SE S Sbjct: 73 CAGQSEAS 80>NP_001265552 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CFGESEVS 8 C G+ EVS Sbjct: 641 CLGKHEVS 648>NP_872393 Length = 3234 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CFGESE 6 C GESE Sbjct: 1287 CHGESE 1292>NP_001265553 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CFGESEVS 8 C G+ EVS Sbjct: 641 CLGKHEVS 648>XP_006724359 Length = 1424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 CFGESEVS 8 C G EVS Sbjct: 248 CMGNQEVS 255>XP_005261762 Length = 1481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 CFGESEVS 8 C G EVS Sbjct: 142 CMGNQEVS 149>XP_005261761 Length = 1587 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 CFGESEVS 8 C G EVS Sbjct: 248 CMGNQEVS 255>XP_005255730 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CFGESEVS 8 C G+SE S Sbjct: 128 CAGQSEAS 135>XP_005255666 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GESEVSR 9 GE E+SR Sbjct: 639 GEKEISR 645>XP_005255665 Length = 875 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GESEVSR 9 GE E+SR Sbjct: 688 GEKEISR 694>XP_005255664 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GESEVSR 9 GE E+SR Sbjct: 688 GEKEISR 694>XP_006720146 Length = 1226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 CFGESEVSR 9 CF VSR Sbjct: 707 CFSRKRVSR 715>XP_005267508 Length = 1773 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 CFGESEVSR 9 CF VSR Sbjct: 707 CFSRKRVSR 715>XP_006716171 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 CFGESEVS 8 CF SEVS Sbjct: 313 CFLNSEVS 320>XP_006716170 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 CFGESEVS 8 CF SEVS Sbjct: 376 CFLNSEVS 383>XP_006712515 Length = 3232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CFGESE 6 C GESE Sbjct: 1285 CHGESE 1290>XP_006712514 Length = 2496 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CFGESE 6 C GESE Sbjct: 1290 CHGESE 1295>XP_006712513 Length = 3220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CFGESE 6 C GESE Sbjct: 1186 CHGESE 1191>XP_006712512 Length = 3237 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CFGESE 6 C GESE Sbjct: 1290 CHGESE 1295>XP_006712511 Length = 3256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CFGESE 6 C GESE Sbjct: 1290 CHGESE 1295>XP_006712510 Length = 3305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CFGESE 6 C GESE Sbjct: 1290 CHGESE 1295>XP_006712509 Length = 3319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CFGESE 6 C GESE Sbjct: 1285 CHGESE 1290>XP_005246533 Length = 3323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CFGESE 6 C GESE Sbjct: 1290 CHGESE 1295>XP_006712508 Length = 3324 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CFGESE 6 C GESE Sbjct: 1290 CHGESE 1295>XP_006711452 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CFGESEVSR 9 C GESE R Sbjct: 364 CSGESEQLR 372>NP_942153 Length = 1349 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 CFGESEVS 8 C G EVS Sbjct: 96 CMGNQEVS 103>NP_115893 Length = 3258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CFGESE 6 C GESE Sbjct: 1292 CHGESE 1297>NP_776159 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FGESEVS 8 FGESE S Sbjct: 121 FGESESS 127>NP_116204 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FGESEVS 8 FGE+E+S Sbjct: 308 FGETELS 314Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.132 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 591,267 Number of extensions: 668 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |